Carassius auratus (goldfish): 113044196
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Entry
113044196 CDS
T07313
Symbol
exosc9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113044196 (exosc9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113044196 (exosc9)
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113044196 (exosc9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
113044196
NCBI-ProteinID:
XP_026059711
Ensembl:
ENSCARG00000025127
UniProt:
A0A6P6JJ22
LinkDB
All DBs
Position
26:7238525..7250082
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AA seq
395 aa
AA seq
DB search
MRDTPLSNCERRFLLKAIEEKKRLDGRQTYDYRNIKITFGTDYGCCIVELGRTRVLCQVS
CELVPPKDSRPTEGIMFFNLELSPMASPAFEPNRQSELLVMLNRQLERCLRNSKCIDTES
LCVVSGEKVWQIRVDVHVLNHDGNLMDAASIAAISALSHFRRPDVAIQGRDITVFSPEER
DPIPLSIYHMPICVSFAFFLQGSYLLVDPCEQEERVKDGLLVIAMNKHREICSIQSSGGI
MLLKDQVLRCSKIASVKVSEITELINKALENDKKIRKEGGKFGFAESMPKERITTLKREE
APVEMADVKETANEIVNRTETPTEVVSSPVLVAMGTAQVGEGIVNSWGLDEDEEDEPQTE
DTKTDDVMVISDSEEEEVVILNEEAQKSTKLSKRK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagggatactccgctgtctaactgcgagaggcgttttcttcttaaagctatagaggag
aaaaaacgcttagatgggagacaaacatatgattaccggaatattaaaatcacctttgga
actgattatggctgctgcatcgtggaacttgggagaacaagggtgttgtgtcaggtgtct
tgtgagttggtccctccaaaagattcacgtcccacggaaggcatcatgttttttaatttg
gagttgtctcccatggcatcgccagcctttgagccaaacaggcagtcagagttgttggtg
atgttaaaccgacagcttgagcggtgtctgaggaactctaaatgcatagacaccgagtct
ctctgtgtagtttcaggagaaaaggtttggcaaatacgggttgatgtccatgtgttaaat
catgatggaaacttgatggatgcagcaagcattgctgccatatctgcactctcacatttt
aggcggccagatgttgctattcagggacgagacatcactgtgttcagtccagaggagaga
gatcctattccactgagcatatatcacatgcctatatgtgtcagctttgcttttttcctg
cagggctcttatttgcttgtggacccttgtgaacaagaagagcgagtgaaggatggatta
ttggtgatagcaatgaacaaacatagagagatctgctccattcagtctagtggagggatc
atgcttctgaaagaccaggttttaagatgcagcaaaatagcaagtgtgaaagtttctgaa
attacagagctcatcaacaaagccttagagaatgacaaaaaaatcagaaaggagggtgga
aagtttggctttgccgagtccatgcccaaagagcgaatcacaacccttaagagagaagaa
gccccagtggagatggcagatgtcaaagagactgccaatgagattgtgaatagaacagaa
actcccacagaagttgtttcctcgcctgttcttgttgcaatgggaactgcacaggtaggt
gagggcatcgtgaactcatggggactcgatgaggacgaagaggatgaacctcagacagag
gacacaaaaacagatgatgtgatggtaatctctgacagtgaagaggaggaagttgtcatt
cttaatgaagaagcccagaaatccacaaagctttctaaacgaaaatga
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