Carassius auratus (goldfish): 113044241
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Entry
113044241 CDS
T07313
Name
(RefSeq) zinc finger CCHC domain-containing protein 7-like
KO
K12597
protein AIR1/2
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113044241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113044241
03016 Transfer RNA biogenesis [BR:
caua03016
]
113044241
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
113044241
Transfer RNA biogenesis [BR:
caua03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
113044241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_3
Zn_ribbon_2
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
113044241
NCBI-ProteinID:
XP_026059820
Ensembl:
ENSCARG00000047117
UniProt:
A0A6P6JJQ5
LinkDB
All DBs
Position
26:complement(8432105..8483232)
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AA seq
576 aa
AA seq
DB search
MFSGYQERDDYEDELYRDDADSSLSDNDSELEFQLYSQLHYSTEIQEDREDSREVQSSVP
QTQTQQKPLPHAPPVDFIVIDSGTDAITESDSSEEDDSVCAKKGQSSKRWNKKLQTHSLL
SPSLPQVQARSSSPDDEVVLESDSEDSSSESVPPFVEDLDSDSDGLENWMILGRDKQDGD
QNIQLNLSLPEHANDEENELFWAVSVKDKEAQISNKRFGPRRVSNRYYNEKSITCHNCKK
SGHLSKNCRAPKKVPCCSLCGLQGHFRRNCPNRYCSNCSLPGHTSDNCLERAYWHKRCHR
CDMTGHFFDACPEIWRQYHITTTKGRICQASDPEASRKPAYCYNCSKKGHFGHECTEKRM
YNGTYPTLPFISRYDTMNDTYYREIRVQKQARELEQAGLISPDRAVVTYTPQPPRKKQKT
SHKQSPYPYNTHSNNQSTRKRRIAHTPKHTNFSVKQNSETSWSHGRQTPKSKFKPQEPSQ
NKAKKKKKKTQSKGIVLDEDADFPRGYNKSKTRDVSSPRKANVKPNKPFGMEKNSKKDKI
SKKKERKWQKRERKAAKDSSMYPSDENLFLIKQRKV
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgttctcagggtatcaggagcgggatgactacgaggacgagttgtaccgggatgatgcg
gactcgagtttgtctgacaacgacagtgaactggagttccagctttattcccagctgcac
tacagcactgagatccaggaggaccgtgaggactcgagagaggtccagtcatcagtacca
cagactcaaacacagcagaaacccttgcctcatgctccacctgtagattttattgtgatt
gactctggcacagatgctatcacagagtcagacagctctgaggaagacgacagcgtatgt
gctaaaaagggtcaatcatcaaaacgctggaacaagaagttgcagacccatagcttgctt
tcaccctccctaccacaagttcaagcaagaagtagctccccagatgatgaagttgtgttg
gaatctgattcagaagacagctcttctgaatctgtacctccttttgtggaggatctggat
tcggactcggatgggctggagaactggatgattctgggccgggacaaacaggatggagat
cagaacatccagctcaacctctccttaccagaacatgcaaatgatgaagagaatgaactg
ttctgggctgtatcagtaaaggataaagaggctcagatctctaataaaaggtttggcccg
aggcgtgtttcaaaccgttactacaatgaaaaatccatcacgtgtcacaactgcaaaaag
tccggccatctctccaaaaactgccgtgcaccaaagaaggtgccatgctgctcattatgt
gggcttcagggacactttcggaggaactgtccgaaccgttactgttctaactgctcgctg
cccggccacaccagtgacaactgtctggagagagcttactggcacaaacgctgccaccgc
tgtgacatgaccggacacttctttgacgcttgcccagaaatctggagacagtatcacatt
acgaccactaagggacgcatctgtcaagccagcgatccagaggcctccaggaaacctgcc
tactgttataactgctctaagaaaggacacttcggccatgaatgcaccgagaagagaatg
tataacgggacatatcccaccctgccgtttatttcccgttacgacacgatgaatgacacc
tattaccgggaaatccgagttcaaaagcaggccagagaactcgagcaagccggattgatt
tcaccggacagagctgtcgttacatacaccccccaaccgcccaggaagaaacaaaaaacc
agccacaaacagtctccatacccatacaacacacacagcaacaaccagtccacgcggaag
agacgcatcgcacacacacccaaacacactaacttcagtgtcaagcagaactcggaaacg
tcatggagccacggcagacaaacccctaagagcaagtttaaaccacaagagccaagccag
aataaagccaaaaagaagaaaaagaaaactcaatcgaaaggtattgttttagatgaagat
gcagactttcctagaggttataacaagagtaaaacaagagatgtttcatcacctcggaaa
gccaatgtgaagccgaataagccctttggaatggaaaagaacagtaaaaaggacaaaata
tcgaaaaagaaggagaggaaatggcaaaagagagaacgaaaagctgcaaaagattcttcc
atgtatccttccgatgaaaacctttttctgattaagcaaagaaaggtatga
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