Carassius auratus (goldfish): 113044300
Help
Entry
113044300 CDS
T07313
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113044300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113044300
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113044300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
113044300
NCBI-ProteinID:
XP_026059923
Ensembl:
ENSCARG00000014818
UniProt:
A0A6P6JJL8
LinkDB
All DBs
Position
26:10458005..10467234
Genome browser
AA seq
564 aa
AA seq
DB search
MSAEEADKTTTTDASAGDEEEEWLYGDEGESKETEEEEAKLTAAISATSAPPVTEEVTAT
TDNTTTTITTTTGNGVTSQVTYKTNEEAPGEDEDSESDSDDDDDDVRVTIGDIKTGAPQY
AAYGGTPVNLNIKSAGSRAYGAGSKVKGIDLEAPGSINGVPVLEVDMESFEEKPWRKPGA
DLSDYFNYGFNEDTWKAYCEKQKRLRMGLDILNIGSTTSKISVQQGRTGNSEKEITVAAH
AAKADFSSPSNLYKAGLNPARISPPHWAGPASQEMSYYTKTPGTIDVIGGQTATISRVEG
RRRHNLEGNNIQVISEHPSSEAEPTKMPPPFFPPGPLPPNMPPPPFLPPPVSQAPPLIPP
PRMPITVPPPNFPLPTGGPPPSLIPTMDNSGHPGGYDGRPVAPFPFPTGGFPPPMQGAVN
PWPGLMDNPKQWDYYPRREKEREKERERERPRERVHERDHSPSAVAYNSDEERYRSYRDY
GDRGYERHRERSSREKEERHRERRHREKEEGRHKSSRSSSRRRHDSEEGDSHRRHKHKKS
KRSKEGKEPSEERSADQENQEAME
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagaggaggcggataaaaccaccaccactgatgcgagtgcaggagacgaggag
gaggaatggctgtacggggatgaaggtgaaagtaaagaaactgaagaagaggaggccaaa
ctgacagcagccatcagtgcgacctctgctcctcctgttaccgaggaggtcactgcgacc
acagacaacaccactaccaccatcaccaccactactggaaatggtgtgaccagtcaggta
acatataaaactaatgaggaagcacctggagaagatgaagacagtgagagtgatagtgat
gatgacgatgatgatgtccgtgtcactattggcgatataaaaacaggagcgccacagtac
gcggcatatggaggaactccagtgaatctaaacataaagtcagctggcagcagagcatat
ggagcaggttctaaagtgaagggcatagacctcgaagctccaggcagcatcaatggagtt
ccagtcctggaagtggacatggagtcctttgaggagaaaccatggaggaagccaggtgcg
gacttgtctgactattttaactatggttttaatgaggacacgtggaaagcatattgtgaa
aagcagaagaggttacgcatgggccttgacatcctcaacattggatccaccaccagcaag
atctcagttcagcagggtcgcacaggtaacagtgagaaggagatcacagttgcagctcat
gcagctaaagcagacttttcctctccatctaacctgtataaagcaggtctcaacccagcg
aggatatcccctccacactgggcagggcctgcctctcaagaaatgtcctattatacgaag
acgcccgggaccatagatgtgattggcggacagactgccaccattagcagggtggaagga
cgacgtcgccacaatctggaggggaataacatccaggtgatttcggaacatcccagctct
gaggctgaacccaccaagatgcctcctcctttctttcccccgggaccactgcctccaaac
atgccacctcctccattcctccctcctcctgtcagtcaggctccacctctgatcccacct
ccacggatgcccatcaccgtccctccacccaattttccccttcctactggaggacctcct
ccttcccttatccctactatggacaacagtgggcacccaggaggatatgacggacgtcct
gttgctccattcccttttcctacaggtgggtttcctccacccatgcaaggagccgttaac
ccctggccgggcttgatggacaacccaaagcaatgggactattaccctcggcgagagaaa
gagagggaaaaagagcgagagagagagaggccaagggaaagggtccatgagagagaccat
agtccctctgctgtggcttataacagtgacgaagagcggtatcgttcttaccgtgattac
ggagacagagggtatgagaggcatcgggagcgatcgagccgtgagaaggaggagcgtcac
agggagaggagacaccgagagaaagaggaagggaggcacaagtcatcacggagtagtagc
agacggagacatgacagcgaggagggtgacagtcaccggcgccacaagcacaagaagtcc
aagaggagcaaagagggcaaggagcccagcgaggagcgatctgctgaccaggagaaccag
gaggccatggagtaa
DBGET
integrated database retrieval system
