Carassius auratus (goldfish): 113044396
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Entry
113044396 CDS
T07313
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113044396 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113044396 (dis3)
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
113044396 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
Motif
Other DBs
NCBI-GeneID:
113044396
NCBI-ProteinID:
XP_026060142
Ensembl:
ENSCARG00000010336
UniProt:
A0A6P6JL97
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All DBs
Position
26:complement(14218213..14232952)
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AA seq
950 aa
AA seq
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MLKSKTFVKKTRAGGVLKIVREHYLRDDIWCGSEVCKECKDEAPVLQEDACIESNLCSYP
HYLIPDTNVLLHQIDILEHTLIRNVIILQTVLQEVRHRSAPVYKRIKDAIHEKEKHFYTF
TNEHHRETFIEREPGESANDRNDRAIRVAAKWYADHLTKNTNGGSLKVVLLTDDRANKEK
AEQYGLTVYRCEEYIKSLIGNPELVDRLALKPDDQNEIIGSKLLFPEHLPLSRIQSGIKN
GGLLQGTFHANRDNYLEGTVFINREGEDINEVLLQGLQNLNRAVHQDVVAVELFPKERWV
APSSVVLQDDSPNDEDAEEDETENKLKGVPPDSSVLKPTGRVVGVIKRNWRPYCGMLSQS
MIKEATRHLFTPADRRIPRIRIETRQAANLAGQRIMVAIDGWPKNSRYPNGHFVKNLGTA
GDKETETEVLLLEHDVPHLPFSPAVLSFLPKMPWSITEEDMKVRADLRHLCVCSVDPPGC
TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQEAASRGTTVYLCGKRIDMVPEL
LSSNLCSLRSNVERLAFSCIWEMNHNAEIIKTRFTKSVINSKASLTYAEAQMKIDDTTMN
DDITKSLRGLNRLAKILKGRRTEKGALTLSSPEVRFHIDSETHDPIDLQTKELKETNSMV
EEFMLLANISVAQKIYDEFSECALLRKHPSPPPSNYDILIKAAKSKDLDIHTDSAKALAD
SLNNATVRNFPYFNTLLRILATRCMMQAVYFCSGMDSDFHHYGLASPIYTHFTSPIRRYA
DIIVHRLLAVAINADSTYPELMDKHKQSSLCNNLNYRHKMAQYAQRASVAFHTQLFFKNK
GIINEEGFILFVRKNAIIILIPKFGMEGTVFFENKDKPSPRLKFDSEGPTLEVEEHTFHM
FDKVKVTISVDASNIQHQRIRMALIEPVIPGVSVPVPESEPVAKKAKLDC
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatccaagacatttgtgaagaagacccgcgctggtggagtgttgaaaatagtg
cgcgaacattacctgagagatgacatctggtgcggaagtgaagtttgtaaggagtgtaaa
gatgaagcgcctgtgctgcaggaggacgcgtgcatagagagcaacctgtgctcatatccg
cactatctaatcccagacaccaatgtacttttacatcagattgacatccttgagcacact
ctgatcaggaacgtcatcattctccagacagttttacaagaggtcaggcacaggagtgcc
ccagtctacaagagaatcaaggatgctattcatgagaaggaaaagcacttctacacgttc
actaatgagcatcaccgggagacattcattgaacgagagccaggggaaagtgctaatgat
cgtaatgatcgagccatccgtgtcgctgctaaatggtacgcagatcacctcactaaaaac
accaacggtggttcactgaaggtggttctgctgactgatgaccgggccaataaagagaag
gcagagcagtatggtctgactgtgtacagatgtgaggagtatatcaagagcttgattggc
aaccctgagcttgtggacagactcgcattgaaacctgatgaccaaaacgaaatcattggc
agtaagttgctgtttccagaacatctgcccttatccaggattcagagtggcattaagaac
ggaggactgcttcaaggcacgttccatgccaacagagataactatctggagggcacggtc
tttataaatagagagggggaggatatcaatgaggttctacttcaaggccttcagaattta
aaccgggccgttcatcaggatgtagtggctgttgaactgtttcccaaagaacgctgggtt
gctccatcgtctgttgtgctgcaggatgatagtccaaatgatgaagatgctgaggaagat
gagactgaaaataagctgaagggtgtgccacctgactctagcgttctcaaacccacggga
cgagtggtgggcgttataaagaggaactggaggccttactgtggaatgctctcacagtca
atgatcaaagaggcaacaaggcacctcttcaccccagcagaccgccgcatcccacggatc
cgtattgagaccagacaagccgccaatctggctggacagaggattatggttgctatcgat
ggctggcctaaaaactccagatacccaaacggtcactttgtgaaaaaccttggcaccgct
ggagataaagagactgagaccgaggtgcttctcctggagcatgatgttcctcacctgccc
ttctctccggctgttctgagcttcctacccaagatgccctggagcatcactgaggaggat
atgaaggtcagagcagatctcagacacctctgtgtgtgtagtgtggatcctcctggctgt
acggatattgatgatgcgcttcattgtcgggaactagagaatggaaacttggaggttggt
gttcacattgcagatgtcagccattttattcggccaggaaatgctctagatcaagaggca
gcaagcagaggcactacagtctacctttgtggaaagagaattgacatggttcctgaactt
ctaagttccaacttgtgttctcttcgatccaatgttgagaggttagcattctcttgtatt
tgggagatgaaccacaatgctgaaatcatcaaaactcgcttcacaaagagtgtcattaac
tccaaggcctcccttacatacgccgaagctcagatgaagatcgacgacaccaccatgaat
gatgacatcacgaagagcctgcggggcctcaacagactggccaagatcttaaagggtcgg
aggactgaaaaaggagcactgaccctctcctctcctgaagtgcgtttccatatagacagt
gagacgcatgaccccatagatctgcagacaaaagaactcaaggagacaaattctatggtg
gaggagttcatgttgctggcgaatatctctgtagcgcagaagatctatgatgagttctcc
gaatgtgccctactgaggaaacacccctcaccaccgccatcaaactacgacatcctcatt
aaggctgcaaaatcaaaggaccttgacatccacacagattcagccaaagctctggctgat
tccctgaacaatgcgacagtgaggaactttccgtacttcaacaccctgctgaggattctg
gccacccgctgcatgatgcaggctgtgtatttctgctctggcatggacagtgatttccac
cattatggcctggcatcacccatttacacacacttcacatcccccatcaggagatatgct
gatatcatagttcaccgtctgttagcagtggctattaatgcagacagtacatacccagaa
ttgatggacaaacataagcagtcatccttatgcaacaacctcaactacagacacaaaatg
gcccagtatgcacagagagcctcagtggcgttccacactcagctattcttcaagaacaag
ggaatcataaatgaggaaggcttcattctttttgtaagaaaaaatgccattatcatcctc
atccctaagtttggaatggaaggcactgtgttctttgaaaacaaggacaaacccagccct
cgtctcaaatttgattctgagggtcctacactcgaagtggaggaacacacgttccacatg
tttgacaaagttaaagtaacgatcagcgtggacgcttccaacatccagcatcaaaggatc
aggatggctctcattgaacctgtgatccctggggttagtgtacctgtacccgagtctgaa
ccagtggccaaaaaagccaagcttgactgctga
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