Carassius auratus (goldfish): 113044404
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Entry
113044404 CDS
T07313
Name
(RefSeq) protein CASC3-like
KO
K14323
protein CASC3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113044404
03015 mRNA surveillance pathway
113044404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113044404
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113044404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
113044404
NCBI-ProteinID:
XP_026060160
Ensembl:
ENSCARG00000002400
UniProt:
A0A6P6JKM2
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All DBs
Position
3:complement(5000486..5015272)
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AA seq
785 aa
AA seq
DB search
MENKSGYDVRTSPHNSARTSALPSLRVKMADRRRRRRRASQDSEEEDESASGSEGGRSLS
AGRKPRGRDPEPLEAPAERVVPKSDAESECESEDGAGEAVLSDYDSADLEENGSHTEGGE
EEEEGEHISEEEASHPAAEPKPAADAPTEELGEEEARDEGAKEVKADEKGNLAGERQSGD
GQESTEDPENKSGSKLDDDEDRKNPAYIPRKGLFFEHDVRGQATEEERPKGRHRKLWKDE
GRWEHDKFREEEQAPKSREELIASYGYDIRNSTGQSDGRSYRFRKPRYSGSPSREPRRHR
EGEKSVRTTWQGPPPGHRNTAPSVTLQSGAPPGPPAAPKPSGRPSTQPPQRSFQSSRALS
AAHRTEGQRHSKPSLDGPPPRGVRPQPVEGERGLRNRGRGSHTAHTDRTPATVVEDIHSE
EEEEEEEGEIPTATTTYTAHHYRTERERVPSPRKQESGPAMEGGSAAGQVRESSPPQEKP
VEKKSYSLVRRATRTRPSDLGKQASLDDSSPAVQQAPAAAKSESWQEQSDAGTQGGLTGL
DQDLARLSLAGQNWAQSPPSYLQAEMRGIRSSVHIAGGPPQYGNMEDIGVGGGRAKRYSS
QRQRPVPEPAPMHIGVMEGHFYEPMSFQGPIYTHGDSPAALPPQGMLVQPEMHLPHPTHP
GHPGLHPHQSGGPLPNPALYAAPPVSMSPGQPPPQQLLPPPFYPPPGVMTFGNTNYPYPA
GATLPPMYPNPQAQSQVYGGVTYYDTVQQQVQPKRSPPRRSSHPVTVRPPPPEDQSRKPA
EEIHS
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaagagtggatatgacgtacgcacgagcccccataattccgcgcgcacatcc
gctctcccttccttgagagttaagatggcggaccggcggcgacggagacgacgcgcctct
caggacagtgaggaggaggacgagtccgcctcgggctccgagggcgggagatccctctcg
gccggccgcaagcctcgtggaagagaccccgagccgctcgaagcgccagcggagcgcgtc
gtccccaaaagcgacgcggagtcggagtgtgaaagtgaagatggcgctggtgaagcggtc
ttatcagactatgacagcgctgatctggaggagaacggatcgcacactgagggaggagag
gaggaggaggagggagagcatatcagtgaagaagaggcctcacatcctgccgcagaaccg
aagcccgctgcagatgcaccgacagaagagcttggtgaagaggaggcgagagatgaaggg
gccaaggaggttaaagctgatgagaaggggaatctagccggggagcgacagagtggggat
ggacaggaaagcaccgaggaccctgagaataaatcgggcagcaagctggacgatgatgag
gaccggaagaatccagcctacatcccccgaaaaggccttttctttgagcatgacgtgaga
ggccaggctacagaggaggagaggcctaaaggcaggcacaggaagttgtggaaggacgag
ggccgttgggaacacgacaagttccgggaagaggagcaggcgccaaagtcacgcgaagag
ctaattgcttcttacggctatgacatccgcaacagcactgggcagagtgatggacgatcg
taccgtttccgaaaacccagatattctggctcacccagtcgggagcctaggcgccatcgt
gaaggtgaaaagtcagtgcgtacaacgtggcaggggcctccacctggccatcgtaatacc
gctccgtctgttaccctgcagtcaggcgcacctcctggtccccctgcagcacctaaaccc
tccggccgaccctcaacccagcctccacagcgcagcttccagagtagtcgagccctgtcg
gccgcccacaggacagaagggcagagacactcgaagcccagtctagacggcccacccccc
cgaggagtgcggccacagcctgtggagggtgagaggggcctgaggaacaggggccgtggt
tcacatactgctcacactgaccgtaccccagccacggtggtggaggacatccacagtgag
gaggaagaagaggaggaggagggtgagattccaacagccacaactacatacaccgctcac
cactacaggacggagagagagagggtaccttctccacggaaacaagagtctggcccagca
atggaagggggcagtgcagccggtcaggtgcgagaatcgtctcctcctcaagagaagccg
gtggaaaagaaatcgtactctcttgtgcgaagggcgacgcgaacacgaccatctgatctc
ggtaagcaggcgtcattagatgactcctcacccgcggtccagcaagcccctgcggcggca
aagagtgagtcgtggcaagagcagagtgatgctggaacacaaggtggactgacggggctc
gaccaggacctggctcgactcagcttggcggggcagaactgggcccaaagcccgccttct
tacttgcaggctgagatgagaggcatccgtagctcagtgcacatagcaggagggcctcca
cagtatggaaacatggaggatattggtgttggtggtggccgggctaagcggtattcatca
cagcgccagaggccagttccagaacctgcacccatgcacataggagtcatggagggccat
ttttatgaacccatgtcattccagggaccaatctacacacacggtgacagtccagcagcc
ctgccccctcaaggcatgcttgttcagcctgagatgcacctgccacaccccacccatccc
ggacacccaggtttacacccgcaccagtcaggagggcccttgcccaatccggctctttac
gccgccccacctgtttctatgtcacctgggcaaccgcctccacagcagctgctcccccca
cccttctaccctccaccaggtgtcatgacctttgggaacaccaactacccgtaccctgct
ggcgctacgctacctccaatgtaccccaatccccaggcacagtcacaggtctacggtggt
gtgacatactacgacacggtacagcagcaagttcagcccaaacgctccccgccccgacgc
tcctctcatcctgttacagtcagacctccccctcctgaggaccagagcagaaagcccgct
gaggagatacactcctag
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