KEGG   Carassius auratus (goldfish): 113044411
Entry
113044411         CDS       T07313                                 
Symbol
poll
Name
(RefSeq) DNA polymerase lambda isoform X1
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03410  Base excision repair
caua03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113044411 (poll)
   03450 Non-homologous end-joining
    113044411 (poll)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:caua03400]
    113044411 (poll)
Enzymes [BR:caua01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     113044411 (poll)
DNA repair and recombination proteins [BR:caua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     113044411 (poll)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     113044411 (poll)
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_B_thumb DNA_pol_lambd_f HHH_8 BRCT BRCT_2 PTCB-BRCT LIG3_BRCT RTT107_BRCT_5 NTP_transf_2 HHH
Other DBs
NCBI-GeneID: 113044411
NCBI-ProteinID: XP_026060171
Ensembl: ENSCARG00000014649
UniProt: A0A6P6JKA5
LinkDB
Position
26:14594780..14600282
AA seq 557 aa
MEGHGILKAFPKVKRARSTEQKDAPALKKTPSEPVTGAVFQGTEIYIVPTGIGKSRCEIF
HRQVTQNGGHVVSTFSPSCTHVVVDDSVDCKRALRLLKVERLPSAVHLVKCTWLSASISE
KSLLDPEDYSLLPPESPTAGHAEESNETAVSQVPDVAAAQDPLKILENLTETVREVPEVQ
EEHHEEDGVSQNDLEALISGVHPSESNPTPSLAEYPILSGKWVCSQPSTTKGENHNKHIT
DKLEPLAKAYTHTGDKWRALGYSKAINALKSYHKPITSYEEACKIPGIGKRMADKIMEIM
ESGHLRKLDHIGEEVPVLEMFTNIWGAGAKTAQMWYQQGFRTLEDIRTKAVLNPTLRIGL
KHYDDLLERMSRSEANAIEKMVQEAVHSVDTQLLVMACGSYRRGKSTCGDVDVLITHPDG
ESHKGVFSKVLHLLHQSGFLTDDLVSHEENGEQKKYMGICRLPGPSQRHRRLDIIVVPYA
EFACALLYFTGSAHFNRSMRAWAKTKHMSLSEHSLNCAVVRQHGVKLVAGTPLHTPTEKD
VFKHLSIPYREPHERDW
NT seq 1674 nt   +upstreamnt  +downstreamnt
atggagggtcatggcatcctgaaagccttccctaaagtaaagagagccaggtctactgag
cagaaggacgcgcctgcccttaagaagacgccttctgaaccagtaacaggagcagttttc
caaggaaccgaaatatacatcgttccaactggcatagggaaatccaggtgtgagatattc
catcggcaggtcacccagaatggaggacatgtagtttccacattctctcccagctgcaca
catgtggttgttgatgattcagttgattgtaagagagctttgagactcttgaaagtggaa
agactgccctctgctgttcatctggtcaaatgcacttggttgagtgccagcatcagtgag
aaaagtttactagaccctgaagactacagccttcttcctcctgagagtcccacagctggt
cacgctgaggagtcaaatgagacggccgtcagccaagttccagatgtagcagcagcacag
gatcctttgaaaatccttgaaaatctcacagagaccgtaagagaggtgccagaggttcag
gaggagcaccatgaagaagacggtgtatctcagaacgatctggaggccttgatcagcggc
gttcacccatctgaaagcaacccgactccgagtctggcagagtatcccattttgtctggg
aagtgggtctgttcccaaccatccacaactaaaggggagaaccataacaagcatattact
gacaaactggagccgctggccaaagcctatacacacacgggcgataaatggagagctctg
ggctactctaaagcaatcaacgccctcaagagctaccacaagcccatcacttcatatgag
gaagcatgtaagatcccaggcattggtaaacgcatggcagacaagatcatggaaattatg
gaaagcgggcacctgcgtaaactggatcacattggggaggaggtgcctgttctcgaaatg
ttcacaaacatctggggcgctggggccaagactgctcagatgtggtatcaacaaggattt
cgcacattggaggatattcgcactaaggcggttttgaatcccactctaaggattggacta
aagcactacgatgacctccttgagcggatgtcaagaagtgaagcaaatgccatcgagaaa
atggtgcaggaggcagttcacagtgtggacacacagctgctggtcatggcgtgtggttca
taccgcaggggcaagagcacgtgtggagatgtggacgtcctcatcactcaccctgatgga
gaatcgcacaagggggttttcagcaaagtgttgcacctcctccatcagagtggtttcctg
acagatgaccttgttagccatgaggagaatggtgaacagaagaaatacatgggcatctgc
cggcttccaggcccttcacagcgccacaggcgcttggacatcattgtagtgccctatgct
gaatttgcatgtgctcttctgtacttcactggctccgcccacttcaacagatcaatgagg
gcatgggccaagaccaaacacatgagcctatcagagcactcgctgaactgtgctgtggtg
cggcagcatggtgtgaagctggtggcgggaactcctttacacacaccgaccgagaaggat
gtcttcaaacacctcagcataccttacagagaaccacatgagcgagactggtga

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