Carassius auratus (goldfish): 113044457
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Entry
113044457 CDS
T07313
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113044457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caua03009
]
113044457
Ribosome biogenesis [BR:
caua03009
]
Eukaryotic type
Pre-60S particles
RNases
113044457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Phage_tail_terminator_7
Zwint
DUF4763
Motif
Other DBs
NCBI-GeneID:
113044457
NCBI-ProteinID:
XP_026060244
Ensembl:
ENSCARG00000022034
UniProt:
A0A6P6JKL4
LinkDB
All DBs
Position
26:complement(16070898..16078710)
Genome browser
AA seq
1218 aa
AA seq
DB search
MFPSTALFREIDCPFLRWGRCNRLYCLYNHGKDNTSGVSTTELEDPEVTSANGASHTNED
SYACIEELERINKEIEAVKCEVEKEQKRLSRYQTSQSLAQTDAGLCSEKYLRTTNSKAKD
QNGNHLRYKKAVSTTSGLKYVVDRARPKTDLEYDPCSNFSADLLSSGSVDCKLKSTDKAD
TEHGLKNNQAGKNNQPLSCHFDDSDDEGTLVIDIPTSAKEQVKCRTKQKGKSTPHLPEGN
YAVNNNLLANDQTKPRQNKEKLSSDGPQINEIKHGEGDQENKRTSVKPVMIQQEQESSEG
ELVIDVSPLEDEHKLSKQCGTTTKELPTLCPISDAPAEDGKEANEGPLNKPVMTAKHFVN
EPKLFLEDLTEVPLSEAVNSTNLNMEAFVTQKEEKTHDMENVLHDISTCLDNMRSESERI
ECNQDAKMLPFSSFYGDEYISSQSPAVVQQDATFEAEPQIDILSYTQKSEVIPSNKISQE
QALQHYFAMVSSQSFPSSLHEIEEHRFGPHSQNLAETSWPTIQKSPIEPFVQNMPAYVSG
IETGTVSVPTFSQLNQRTTVAQKLTTSVASFPVPCNIPVPSQTFASAAVAGSNNEAIVID
SSSDEELRYSDLDLSESDPMEECYRIFMEANQNEGPEVQCDPPEEILDTQETEKSNSVAV
LKKRVAHVAKFEQPANKSKAQIIVPLREVGSQLSIPSRTQLCQRRAAILTAAVKGCQSQA
ISSAPKKVYAPSDLQSSTVQNSCVGIFPVGATVQLGANLHLIVPEGNCALPVTLIPTTMS
IQRPPPPPPSVHLSQTLHPPQPANYTPAKAMGVKRKAKIRQEVGAKVPHDVRQRYVNLFV
EEFLKSSQTVQVAFEKALAEEKNVYDRSINKLKYLSIAVNALKRLKNQNVLPAKAPSERD
QHVSRGNVPLNTQALQGPGDLTLYEQLKEHVLSEDMLRVNNFPRKNKDKADVAIQYGDTK
KGISDPLKRICCRCGATFSVDKSGKHTRREECNYHYGKVLENRVPGGVETRYSCCENAVG
SPGCQVFNLHVHDAVSLEGFVNSLPQSSVAKTCPGVFAVDTQTCYTTQGLELARVTVVNS
SLQVVFDSFVKPDKDVIDYNTRFSGINEDDVKGTNSSLCDVQAALLSFINADTILIGHGL
ENDLTSLKIIHSTVIDTSVVFPHRLGLPHKRELNSLTADYLRRIIQESVVGHDTREDATA
CMELMLWRVKEDSKVKRW
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgtttccttccactgctctcttccgtgaaattgattgtccctttcttcgatggggacga
tgcaatcgactttattgtttgtataatcacggcaaagacaatacgtctggcgtgtctacg
acagaacttgaagatcctgaagtcacttctgccaatggagcctctcacaccaatgaggac
agttatgcttgcattgaggaattggagaggatcaacaaggaaatcgaggcagtgaagtgt
gaggtagagaaagaacaaaaaagactgtctcgctatcagacgtcgcagtccctcgcgcag
acagatgcaggtctttgctctgagaaatatttgaggaccaccaacagtaaggctaaagac
cagaatggaaaccatttgagatacaaaaaagctgtttccacaacgagcggtcttaaatat
gtggttgatcgcgccagaccgaagactgatttggaatatgacccatgttccaatttctca
gcagacttattatctagcggctcagtagactgtaagctgaagtcaactgataaagcggat
actgaacatggcctgaagaataaccaagcaggaaaaaataatcagcctctctcctgtcat
tttgatgactctgacgatgaaggtaccttggtcattgacattccaacttcagcaaaagaa
caagtaaaatgcaggaccaaacagaaaggcaagagtactccacatttacctgaggggaat
tatgctgttaataataatcttcttgcaaatgaccaaacaaaaccaaggcagaacaaggaa
aagttgtcttctgatggacctcaaattaatgaaattaaacacggagagggtgaccaagag
aataaaaggacctcagtgaaacctgtgatgattcaacaagaacaagagtcttctgaaggg
gaacttgtcattgatgtgtcgcctctagaagatgaacataagctttcaaagcagtgtgga
actacaaccaaggaactacccacattatgtcctattagcgatgccccagctgaagatggt
aaagaggctaatgaaggacccttaaataaaccggtaatgaccgcaaagcacttcgtaaat
gaacccaagctttttctggaggatctaaccgaagtacccctgtctgaagcagttaactct
acaaatctcaatatggaagcatttgttactcaaaaagaggaaaaaactcatgacatggaa
aacgtcctgcatgacatttctacatgtctagacaatatgagaagtgagagtgagaggatc
gaatgcaatcaagatgctaagatgcttcctttcagttctttttatggagatgaatatatt
tcctcacagtctcctgcggttgttcaacaagatgcaacttttgaggccgaaccacaaatt
gacatcttaagttatactcaaaagtcagaagttattccttctaacaagatctcccaagag
caagcacttcagcattactttgccatggtctcctctcagtcctttccatcatccttacat
gagatagaagagcacagatttggtccacactctcagaacctggcggaaacatcttggcca
actattcagaaaagtcctattgaaccatttgttcagaatatgcctgcttatgtttcaggg
attgaaaccggaaccgtttctgtaccaacatttagtcaactaaaccaaagaacaactgtg
gctcagaaattaacaacatcagttgcgtcattccctgttccctgcaacatacctgttcct
tcacagacctttgcatctgcagcagtggcaggaagtaataatgaagccattgtgattgac
tccagttctgacgaggagcttcggtactccgacttagatctttccgaatctgacccaatg
gaagagtgctacagaatcttcatggaagccaaccaaaatgaaggtcctgaggttcagtgt
gatccacctgaagaaatattagatacccaggaaacagagaagtctaattcagttgctgtg
ttgaagaaaagggtggcacatgtggcaaagtttgagcagcctgccaataaaagcaaagca
cagattatcgtccctctacgagaagtcggttcccagttaagcattccctccagaactcag
ttatgccagagaagagcggctattttgactgctgcggtgaaaggctgtcagtcccaggcc
ataagcagtgctccaaagaaggtttatgcacccagtgaccttcaatcaagtacagtgcaa
aactcctgtgttggtatttttccggttggtgctactgtacagttgggggcaaacttgcac
cttattgtacctgaaggaaattgtgctttacctgtgacactgattcctaccacaatgtcc
atccaacggccacctccgcctcctccatctgttcatctttcacaaactttacatcctcct
caaccagccaactacacaccagctaaggctatgggtgtaaaaagaaaagcaaaaatacgc
caagaggttggggcaaaagtgccacatgatgttcgtcaacgctacgtgaatctctttgtg
gaggagttcctgaaatcatcccagacggtgcaagttgcattcgagaaggctctggcagaa
gaaaaaaatgtttatgaccgcagtatcaataagctcaagtatctaagcatagctgtcaat
gcactcaagagacttaaaaaccaaaacgtcttgcctgccaaagctcccagtgagagagat
cagcatgtgtctagaggcaatgtaccactaaatactcaagcacttcagggacccggtgat
ttgacactttatgagcaactgaaggaacatgttctatctgaggacatgttgcgagtaaac
aacttccctcgtaaaaataaggataaagctgatgttgccatccagtatggagataccaag
aagggcataagtgaccctctgaagagaatctgctgtcgatgtggagcaacgttttctgtt
gacaaaagtggaaagcacacccgcagagaggagtgtaactaccattatggaaaagtccta
gagaatcgagtgccgggaggtgttgagacgcgctacagttgttgtgagaatgcagttggg
tcacctggatgccaagtgttcaatcttcatgtccatgatgcagtaagtcttgagggcttt
gtgaacagtcttcctcaatcatcagtagccaaaacatgtccaggagtctttgctgttgac
acacaaacatgttacacgactcaaggtctggaactagcaagagtgaccgtggtcaacagc
agtttgcaagttgtctttgactcctttgtcaagcctgataaggatgtcattgactataat
accaggttctccggcatcaacgaggatgacgtgaagggtacgaactcttctttgtgtgat
gtacaagcagcacttttgagctttattaatgcagacacgattctgattggccatggcttg
gagaatgacttaacttctctcaaaattattcacagcactgtgattgacacctctgtggtg
tttcctcatcgtctgggtctgccacacaaaagagaacttaacagtctgactgcagactat
ctccggagaattatccaagagagcgtggtgggtcatgacacacgcgaggatgccacggca
tgcatggaactcatgctttggagggtgaaagaagactccaaagtgaaaagatggtga
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integrated database retrieval system
