Carassius auratus (goldfish): 113044810
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Entry
113044810 CDS
T07313
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113044810
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113044810
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
U-box type E3
113044810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-CCHC
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
SR-25
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
113044810
NCBI-ProteinID:
XP_026060764
Ensembl:
ENSCARG00000004940
UniProt:
A0A6P6JLT3
LinkDB
All DBs
Position
3:complement(5712272..5725463)
Genome browser
AA seq
1776 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHITLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
GALIPKNSSVIIRRIPIGGLKSTSKTYVLNRSEPSGSSKAIDDSSSISLALLSKTANLAE
TNASEEDKIKAMMSQSNHDYDPIHYAKKLVGPPPPNYTCFRCGKTGHYIRNCPTNGQDRS
FEAPQRIKKSTGIPRSFMVEVDDPNRKGVMLTNSGMYAIPTIDAEAYAIGKKEKPPFLPQ
NQSSSSEEEDPVPDELLCLICKDLMTDAVVIPCCGNSYCDECIRTCLLESDEHVCPTCKQ
SDVSPDALIANKFLRQAVNNFKNETGYTKRIRKAAVSAQGAQTQAPAQRPPMRLATSRQQ
DPLMAHVPSSAADSTPPQSTPAAPLSPVSTKQPSSTPPSSSSSTVNSSSATAVTNYSPVV
NSPQHSTKQDDPPLKEPEVPASTVVPSSDTSVQTPIPKGYHVPVIGKPNMPQHHMHRSGP
QRTSGPRPTGGRPAWDPSSSRGRPPIERPPRTQPPPVQNLPPVVPPVYAPPALFPPPPPH
PMPQPPGGVPQQYPLQYPPGQQPPPPYNIPPPVFPPVPPNVTAPWVPPGPQPPIVNPISN
MPTAPFLSKEEFYRQQRRLKEDSQCRFVTREKSKLEEFTNDFAKELLEYRKIQKERRRSY
SRSKSPYRDSSYSGSSYSYSKSRSRSKSPRSYSRSVSRSRSRSRSRSRSRSRSYSRSPYS
RRGRGRSRSYRSRSRTPTYHRSHSKSPSYRGREMSGMGSGIYRSRSRSPLYRNHSPGKKI
PPPSQIEGDRKYAGRYRELPPYDAKAYYGRNIDQSDPYERERYREWEREYREWYDKYFKS
YDNPPGSQMRGHGPGNRDPYSPERFAPPRPRENSPYSRGRREDYPPPPQSHGVPSRSRAA
MTYQEKCAEKYGHLHINSTGAGRGLNKESLKPLKDREPGGSTAADPKSVKHKKHRKKKRE
DSDLFSHSDSMDESRKDNRKEDSMLMNSSRDDATPVRDEPMDSAAVSYKTIPVKEKKEKT
KSKTDKVKRKSDNSGQKKEESGKMSKPAREKESDAPRDKVASTEPAIKRVKDEPIHKSEP
SKPQSSESKLMLPRKLMQSRPIKHQELKPIKDEVKSKKELVKDSAKQDKGPVKEGKVSKK
EPEKPVKTEEKMPAKTVDTKPDKKKRKDDKPPGKDLDILPVKVAKMEADVAKSSPKPKNR
LDSERPVEKEKVAIPSLMDIKPEPVRKIKINREIGKRISSTDRPISDEDSAHATGKSRLD
KSRGKLRRKVHAPDGSGSILVDYTSTSSTGGSPIKKHEDKLDLKKTVVKTLEEYTNDSTT
PAEDEIVMIQVPRSKWEKEDYESEDDDSKVTTRTGNINTSSVAPSEENTAVKSADKESPH
ADKALPVSKEAEVKPAKDSTSGDKEKDTDREKDRERERDKGKERDHCSTVDREVTDKRKP
SVPNQERECVQEKGSDHGSERSSSSQSSRDRQADRSETTSRKPAGRETTAGVTSRKADHR
DDARDHSGPRSKDERNPIRRRVSPSPPSRVKDLHTDSGRKTLEAPKESQSPSMNKRASSQ
HAPEPKQTGPEDHKGDWPCSKESQSSRHSDVRPAKDREHRTPHRALNPEARTDAERGGAH
GDHNKIPSARSTRLSSDLARETDEAAFVPDYSESDSETSDTESKMEQRGQERDSSGSQSP
SPSGSHGHSSSPSSPGSQDSKKKKKDKKEKKEKKKHKKHKKHKKHKKHTSNESESELKVQ
KHKHKKKKSKKSKDKDKDDKEKDESERDEHKAKVTV
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgtccattacaagttttcttctaaactcaactacgacacggtcaccttcgat
ggccttcacatcacgctcagtgatttgaaacgccagatcatggggcgagaaaagctgaag
gccgccgattgcgacctgcagatcaccaacgcgcagactaaagaagaatacactgatgat
ggagccctcatccccaagaactcgtctgttatcatcagacgaatccctattggagggctt
aagtcgactagcaaaacatatgtcctcaatcgatctgaaccaagtggatcttcaaaagca
attgatgattcatcatccatttcactggccctgctttcaaagacagccaatcttgctgaa
acaaatgcatcagaggaagacaaaattaaagcaatgatgtctcagtccaaccatgactat
gacccaattcattatgcaaagaagcttgttggtccacctcccccaaactacacatgcttt
cgttgtggaaaaactggacattatatccgaaattgtccaacaaatgggcaggatcgaagt
tttgaagctcctcagcggataaagaaaagcacaggaattcctcggagtttcatggttgag
gttgatgatccaaacagaaagggagtcatgttgaccaacagtggaatgtatgctattcct
actattgatgctgaggcttatgccatagggaagaaagagaagccaccatttttgccccaa
aatcagtcttcatcttcggaggaagaagatccagtacctgacgagctactttgtttgatc
tgcaaggatcttatgacagatgctgtcgttatcccctgctgtggaaatagctactgtgat
gagtgtatccgaacgtgtttgctggagtctgatgaacatgtttgcccaacctgcaaacaa
tcagatgtatctcctgatgctttgattgcaaacaaattcttgcgccaagcagtaaataat
tttaaaaatgaaactggatataccaagaggattcgaaaagctgcagtatctgcacaagga
gcccaaacacaggctcctgcccaacggccacctatgagactggcaacctcacgccagcag
gaccctctgatggcccatgttccaagctcagcagctgatagcacccctcctcaaagcaca
cctgctgcccctttatctcctgttagcactaaacagccatccagcaccccaccttcttct
agcagctccactgtaaacagcagcagtgcaacagcggtgacaaactatagccctgtggtg
aattctcctcaacactctactaagcaggatgaccctccattgaaagaaccagaggtccca
gcatctactgttgtgccttcatcagacacgtctgtccagactcctattccaaagggatac
catgtcccagtaattgggaagccgaatatgcctcagcaccacatgcacagatcaggaccg
caaaggactagtggaccaaggccgactggaggccgtcctgcatgggatccgtcctcaagt
agaggcagaccccctattgaaagaccaccaagaacacagccgcctccagtacaaaacctt
cctcctgtagtccctccagtgtatgcgcctcctgctcttttccctcctccaccaccacac
cctatgcctcaaccgcctggtggtgtaccacagcagtatcccttacagtatcctccagga
cagcagcctccccctccctacaacattccaccacctgtatttccacctgttccgccaaat
gtgacggctccatgggtgcctcctggtccacagccacctatagtcaaccctatctctaat
atgccaacagcaccttttctgtccaaggaggagttttaccgtcagcagcgtagactgaag
gaagattcccaatgtcgattcgttaccagggagaagtccaaacttgaggaatttaccaat
gactttgccaaagagcttttggaatacagaaagatccagaaggagagaaggcgatcctac
tctagatcaaaatctccttacagggattcctcctatagtggctcatcatattcttattca
aaatcccgctctcggtccaaatcaccacgctcttactctcggtcagtatctcgatctcgg
tcaagatcccgttcacgctctcgttccagatcacgttcctactctcgctcaccatattct
cgcaggggccgtggtcgaagccgtagctatcggtctaggtcacgtactccaacttaccat
cgctcccacagtaaatcaccatcatataggggtcgggagatgagtggaatgggaagtgga
atctatcgttcccgctctagatcccctctatataggaatcacagtcccggcaagaaaatc
ccacctccttctcaaatcgagggggatcgtaaatatgcaggaaggtacagagagctccct
ccttatgatgctaaggcttattatggccgcaacatagaccagagtgatccctatgagaga
gagcgatatcgagagtgggaaagagaatacagggagtggtacgataaatacttcaagagc
tacgacaacccaccaggaagtcaaatgcgaggccatggtccaggcaacagagacccctat
agtcctgagcgttttgctcctccccgaccaagagaaaactccccctacagcaggggacgt
cgagaggattatccgccgccacctcagagccatggtgtcccatcgagaagcagagctgcc
atgacataccaagagaagtgtgctgagaagtatggccatcttcacatcaactccactgga
gcagggagaggacttaacaaagagtctttgaaacctctcaaggaccgagaacccggtggc
agcactgctgcagaccccaagtctgtgaagcataaaaagcatcgcaaaaagaagagagaa
gatagtgacctcttcagccactctgattctatggatgagtccaggaaagacaatcgtaaa
gaggactcaatgctgatgaattcaagtcgtgatgatgccacacctgtcagggatgagccc
atggatagcgctgcagtgtcttacaagactatccccgtaaaggaaaagaaagagaagact
aaaagcaaaactgacaaagttaaacgaaagtctgacaacagtgggcaaaagaaggaagaa
tcaggaaagatgtcaaaacctgctagagagaaagaatctgatgcaccacgagataaagtg
gcatccactgaaccagccattaagagagtcaaagacgaaccaatccacaaatctgagcca
agcaaacctcaatcctctgagtccaaactcatgctcccacgcaagttgatgcagtctagg
cccatcaaacaccaggagctgaagcccatcaaagatgaggtcaaaagcaagaaagaattg
gtgaaagactctgcaaagcaagacaaaggtcctgtcaaagaaggcaaggtctctaaaaaa
gagccagagaagcctgtgaaaactgaagagaagatgcctgctaagacagttgatactaaa
ccggataagaagaaacgtaaagacgacaagccacctgggaaagacctagatattcttcca
gtaaaagtggcaaaaatggaagctgatgtggctaaaagctctccaaaacctaaaaacaga
ctggatagcgaaagaccagttgaaaaggagaaagtagctattccgtctctaatggatatt
aagccagagcctgtaagaaagattaaaatcaacagggaaattggcaagagaatatctagc
actgatcggccaatttcagatgaggactctgctcatgccacgggaaaaagcagacttgac
aagtctagaggaaaattgaggaggaaggttcatgctcccgatggatcagggtccatattg
gttgattacaccagcaccagttctacaggtggaagccccatcaaaaagcatgaggataag
cttgacctaaagaagactgtggtgaagaccctggaggaatataccaatgacagcaccacc
ccggctgaggatgaaattgtcatgatccaagtgccccgttctaaatgggaaaaggaagac
tatgaatctgaggatgatgattctaaggttaccaccagaaccggcaacatcaacacatct
agtgttgctccttcagaggagaacactgcagtgaaatcagctgacaaggaatctccacat
gctgacaaagctctgcctgtctccaaagaggcagaagtcaaacctgccaaggactccaca
tcaggtgataaggagaaagatactgacagagaaaaagacagagagcgagaacgagacaaa
gggaaagaaagagatcactgcagcaccgtagatcgtgaggtaactgataaaaggaagcct
agtgtacctaatcaggaaagagagtgtgtacaagagaagggcagtgaccatggcagtgaa
cgaagctcttcttcccagtcctccagagataggcaagctgacaggtctgagacaacctct
agaaaaccagcaggaagggagacaactgcaggtgtcaccagtaggaaagcagaccataga
gatgatgcaagagaccactcgggcccaagatcaaaagatgagagaaatccaatcaggagg
agagtatcaccctccccaccctcaagagtaaaggacttgcacacagactctggaagaaaa
actcttgaagctcctaaagagtcccaaagtccaagtatgaataagagagcatcatcgcag
catgcaccagagccaaaacaaaccggaccagaggaccacaaaggagactggccatgcagc
aaggagagccagagttctaggcattctgacgtacgtcctgcaaaggaccgggaacacagg
actcctcatagagctttgaatccagaggctagaactgatgcagaaagaggtggtgcacat
ggcgaccacaacaaaatcccatctgcacgctccacaagactctcctcagatttagcacgg
gaaacagatgaggctgcatttgtccccgactacagcgaaagcgacagcgagacctcagac
actgagagcaaaatggagcagagagggcaagagagggacagcagtggcagccagagtccg
agcccttctggaagccacggacacagcagcagccccagctctcccggcagtcaggacagc
aaaaagaagaaaaaggacaaaaaggagaagaaggaaaagaagaaacacaagaagcacaaa
aaacacaaaaagcataagaaacatactagtaatgagtctgaatcagagctcaaagtacag
aaacacaaacataagaaaaagaagtctaaaaagagcaaggacaaagacaaagatgataag
gaaaaagatgagagtgagagagatgaacacaaggcaaaagtaaccgtttaa
DBGET
integrated database retrieval system
