Carassius auratus (goldfish): 113044965
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Entry
113044965 CDS
T07313
Name
(RefSeq) coatomer subunit beta'-like isoform X1
KO
K17302
coatomer subunit beta'
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113044965
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113044965
Membrane trafficking [BR:
caua04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
113044965
Exosome [BR:
caua04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
113044965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
113044965
NCBI-ProteinID:
XP_026060804
Ensembl:
ENSCARG00000016644
UniProt:
A0A6P6JLW8
LinkDB
All DBs
Position
27:653145..661809
Genome browser
AA seq
946 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVITGADDMQIRAFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNNVALGYDEGSIIIKLG
REEPAMSMDTSGKIIWAKHSEIQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESSSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSANGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYLSEKVAASQESNEGITEDGIEDAFEVQGEIQEVVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSFSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSSDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNATMVAKLAEGAE
RDGKNNVAFMTYFLQGKLDNCLELLIKTNRLPEAAFLARTYLPSQVSRVVKLWRESLSKV
NQKAAESLADPTEYENLFPGLREAFVAEQYLRETCLGQTRPASDYPLVTPNEERNVLEEA
SGYEPKGIIPTPTQQVKDAEEDPEDVGVLASVTAAVSPPVVAEVPTMSHAESQPAQKVEE
KTQKEPPKTTAAEQKVIDDLEDDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacatcaagcgcaaactcacggctcgatctgaccgtgtcaaaagc
gtagaccttcatccgtccgagccatggatgctggccagtctgtacaatggcagtgtctgt
gtgtggaaccatgaaacacagactctggttaagacttttgaagtctgcgaccttccagta
agagccgccaaatttgtcgccaggaaaaattgggtcattactggtgctgatgacatgcaa
attcgggctttcaactataacacactagagcgagtacacatgtttgaggcccattcagat
tacattcgctgcatcgctgttcatcccacccagccctacatcctcacaagcagtgatgac
atgttgataaagctctgggactgggagaagaaatggtcctgcagtcaggtgtttgagggc
cacacacactacgtcatgcagattgtcatcaaccctaaagacaacaaccagtttgcaagt
gcatcgctggatagaactatcaaggtttggcagctgggctcttcctctcctaacttcact
ctggagggccatgataagggggtgaactgcattgattattacagtggaggagataaaccc
tacctcatatcaggagctgatgacagactggtcaagatttgggactatcagaataagacg
tgtgtgcagacgctcgagggtcacgctcagaatgtgtcctgtgtaaacttccacccagag
ctgccgatcatcatcactggatcagaggacggcacggttcggatctggcactccagcact
tatcgtctggagagcaccctgaactatggtatggagcgggtgtggtgtgtgtctggcttg
cgtggctccaacaatgtggcattgggctatgatgaaggcagcatcattatcaagcttggt
cgtgaggagccagccatgtcaatggacaccagtggaaaaatcatttgggccaagcactcc
gagattcagcaggctaacctcaaagccatgggagatgctgagatcaaggatggtgagagg
ctgccactggcagtgaaagacatgggcagctgtgaaatctaccctcaaaccatccagcac
aatcctaatggaaggtttgtggtggtgtgtggagatggagagtacatcatctacactgcc
atggctctgagaaataagagctttggatctgcacaggagtttgtctgggcccatgattca
tctgagtacgcgatacgggaaagcagcagtgtggttaagatcttcaaaaattttaaggag
aaaaaatcttttaagccagactttggagcagaaggcatctatggtggtttcctgctgggt
gtccgatcagcgaatggcttggctttctatgactgggataacacagagctgattcgccgc
attgagatccagcccaaacacattttctggtcagactccggagagctggtgtgtattgcc
accgaggagtctttcttcatcctgcgctatctgtcggagaaggtggctgcctcacaggag
tcaaatgaggggataactgaagacggtattgaagatgcttttgaggtccagggagagatt
caggaagtggtaaagactggtctgtgggtgggagactgtttcatttacaccagctctgtc
aacagactcaactactttgttggaggagagattgtcacaattgctcacctggacagaact
atgtaccttctgggttacattccaaaagacgaccgtctttacctgggtgataaggagctg
aacatagtgagtttctctcttctggtgtctgtcctggagtaccagactgccgtcatgcgc
agagactttggcatggcagacaaagtgctgcccaccattccgaaagaacagagaaccaga
gttgcccacttcctggaaaaacagggtttcaagcagcaggctctggccgtgtcctctgat
ccagagcaccggttcgagctggcgctacagttaggagagctgaaaattgcttatcagcta
gcagtagaagctgagtcggagcagaagtggaagcagttggcagagttggccatcagtaag
tgccagtttagtttggcacaggagtgcctccatcatgcccaggactatggaggactgctg
ctgctggccacagcatctggcaacgccactatggttgccaaacttgcagagggggcagag
cgtgacggcaaaaacaatgttgccttcatgacctacttcctgcagggaaaactggacaac
tgtttggagcttctgatcaagacaaatcgtctgccagaagcagcctttcttgcccgcaca
tatctgcccagccaagtatccagggtggtgaagctttggagagagagtttgtctaaagta
aatcagaaagcagcagagtctctggcagaccccacagagtatgagaacttattcccaggt
ctgagagaggcctttgtggcagagcagtacctgagagagacctgcctcggccaaacaaga
cctgcctcagactacccactggtcacgcccaatgaagaaagaaatgtgttggaagaggcc
agtggttacgaacccaaaggaattatccccactcccacgcagcaggtgaaggacgcagag
gaggacccagaggatgtgggtgttttggcctcggtgacggcagccgtctcgcctccagta
gttgcagaagtgcctactatgagtcatgctgaatcccagcctgctcagaaggttgaggag
aagacacaaaaagagcctcccaagacaacagcagcagaacagaaggttatcgatgatctg
gaggatgatttggataacatggagcttgatgacattgacaccacagacgtcaatctggat
gacgacttcttagatgactaa
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integrated database retrieval system
