Carassius auratus (goldfish): 113044984
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Entry
113044984 CDS
T07313
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03015
mRNA surveillance pathway
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113044984
09122 Translation
03013 Nucleocytoplasmic transport
113044984
03015 mRNA surveillance pathway
113044984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113044984
03041 Spliceosome [BR:
caua03041
]
113044984
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113044984
Spliceosome [BR:
caua03041
]
Complex C
Other components
EJC/TREX
113044984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
113044984
NCBI-ProteinID:
XP_026060826
Ensembl:
ENSCARG00000036593
UniProt:
A0A6P6JLY4
LinkDB
All DBs
Position
27:1030446..1056698
Genome browser
AA seq
1763 aa
AA seq
DB search
MADLEDVTLDGRPLHSLRVADLKAALEERGLPKSGQKNALIKRLKGALMLENLQKTSTQH
IGLQPNSRIGEEMSQNSFIKQYLAKQQELLRQRLEKEAREAAETDGTDHEDHTEANAPNQ
GVAPSLVDQHKGGTAVAGGFGVNVSESEGLREKETPGQPSPSAPAQPGAIASLSVQVVRE
RGPTSSHVAADSDDDSEGGDDNDEEEEEWNASAQRSRRAQPPKSQLVRERSGGSQQQQQP
PPQHIPLLSQQLRQPTPPPSPPPELSFPLPDTPKQSPPSPGEPPSRQRMSSSSSSGSSSS
DSRSSSPEPAGDSTERRPGPLTLLARKMASEGAFSGAGKHDREGMDGQRSHHEGVVSAIT
HTANAASVLSYPSSVISNQAVSVVRTAAVEASDGMKQNEGGHLLWEQENKKRERQRDQER
QKALEKEREGKEKALEEERARVLQQERQEREEALKRERALQREREEKEKALKREREEREK
LEREQALEREQLERKQALEREMQEKERLERERQEALERERLERERLEKERQEREKALERE
RLERERLEKERKERERALERERLERERLEKERLEREQALERERLERERLEKERQEREQAL
ERERLEKERLEKERQEREQALERERLEKERLEKERQEREQALERERLEKERLEKERQERE
QALERERLEKERLEKERQEQKQALERERLEKERLEKERQEREQALERERLEKEQLEKKRQ
EQERQEKEQVLERERQEKERLEREQAFERERLEREAALEKERQEMERAKEQQRLEKEKAE
KERHEREAALKRKRQEQERLEKEKALEEEQLQKEQVLEREREAQRKAEEEREQTLEKEKE
EQERGLKEEQQRALEERERHLEQKRVQEEKEKALNIEKEEEHEKERESCLPPWKRGRDIS
GLSYLAAEPASQKSPMEKPDESETGEFQSAGKDAQYTEPVPRKSPTLATPLSPQSSSKKS
RFLRDAPVTTSLTSSPTSVLKRPRTFSDSPMPQTPSVPLASKPEGKDASQAHQTSVLASA
SNELENKTPEVPAKQHAQQEEKMETSENSEASKDTKQKPLRREKDEEKPLSDEKKRGRER
EKKQVEKKRRKSSSSSESSSSNSDSGSSSSSSRSSSSSSSSSEEEKINCSSGDRKSKEVQ
KESSSQATEKVVAEKPPTAQCKKRVFTRQEGKDTGKEEVIQTKKPCLELQDEKVTRGRKA
EIEDDDTNKDTASEVKEAVMAEPEKVPESSEESTTAKTFSARRISLGSSKQSPGVVSSEG
EAEAASSAIAGRKRRWGSSTAVTAKKPSISITTDSLKSLIPDIKPALGQEAVLDLHPEEM
HLSGEEEGGERGDQDLKIRRTVTQVVPSDTQENGQKESKRSEHEDEEERSEGQDRLSQEE
KIEGSIQVSMEMEPSSPGRDIDMKTVTPSDTLIRRSISQQKSGVSITIDDPVRTAKQPSP
PRGKLSNIVHVCNLVRPFTLGQLKELLNRTGTVVEEGFWIDKIKSHCYVTYSSVEEAMST
RTALHGVKWPQSNPKFLSVDFCMQEELDFHRGLGPAGEKPTEEPHGAAAAGPGRPIPPPL
LPERDQWAEREREMERRERARAEREWDRDKVRDFSKLGEEREAGARRSRSRDRERRRKER
GKSKEKKTDKKEKLEDPPAKLLDDLFRKTKAAPCIYWLPLTEELAAQRAAARAERMRERE
KRRKEMEEEDKKRDEERRERMKTGGATGGEGERDRDRDRDRGREREREGDKRKEGYRRPG
GNSASGSRRSRSHSDPPLRDRRH
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttacgctggacgggaggccgctccattcgctccgggtagcg
gatttgaaggcggcattggaagagagagggcttccgaaaagcggacagaagaatgctctc
atcaagaggctcaaaggggctcttatgttggagaaccttcagaaaacctccactcaacac
attggcctgcaacctaactcccggattggggaggaaatgagtcagaacagcttcattaaa
cagtacttggccaaacagcaagagcttctgaggcagcgtttggagaaggaagcacgagaa
gcagctgaaactgatggaacagaccatgaagaccacacagaggctaacgcccctaaccag
ggtgttgctccctccttagttgaccaacacaaaggaggaacagcagtggctgggggattt
ggggtgaatgtgagtgagagtgaagggctcagagaaaaagaaacgcctgggcagccgtcc
ccctctgcacctgcccagcctggcgcaatagcctctttgtcggtgcaggttgttcgtgaa
agaggaccaacatcaagccatgtagcggctgacagtgatgatgacagtgaaggcggggat
gacaatgatgaagaggaggaggagtggaatgccagtgctcaacggagtcgtcgagcacag
cctccaaaaagccagctggtgagggaaagatctggtggctcgcagcaacagcagcagccg
ccccctcaacacatacctttactatcacagcagctcagacagcccactcctcccccatcc
cctcctcctgaactctcttttccactcccagacacccctaaacagagcccgcctagtccc
ggagagcccccatctaggcagcgtatgtctagctcttcgagctctggtagttccagtagt
gacagtcgtagcagtagccctgaaccagcaggtgattccacagaacgcagaccaggccca
ctgaccttactggcacgaaagatggcatctgagggagctttctctggtgcaggaaagcat
gatagggagggaatggatggacagagaagccaccatgagggagttgtgtctgcaattacc
cacacagctaatgcggcatcagttttgtcataccccagttcagttatctccaaccaagcg
gttagtgtcgttagaaccgcggcagtggaagcgagtgatggtatgaagcagaatgagggt
ggccatcttttatgggagcaagaaaacaaaaagagggaaaggcaaagagatcaagagaga
cagaaagccctagaaaaggagagagagggaaaggagaaggcattggaagaagagcgagca
cgggttttgcaacaggaaagacaggaaagagaagaagctctaaaacgggagagagcttta
cagcgagaaagggaagagaaagaaaaggccttaaagcgggagagggaagagagggagaag
cttgaaagagaacaagcattggaaagagaacaacttgagagaaaacaagctctggaacgt
gagatgcaagaaaaggagagactggaaagagagaggcaggaagctttagagcgggaaaga
ttggagagagagagacttgaaaaagaaagacaagaacgagaaaaagccttagaaagggaa
agacttgagagagagagactcgagaaagaaagaaaagaacgagaacgagctctagagagg
gaaaggttggagagagagcggcttgagaaagaacgactagaacgagaacaagcactagag
agagaaaggttggagagagagaggcttgagaaggaaagacaagaacgagaacaagctcta
gagagggagagattggagaaagagcggcttgagaaggaaagacaagaacgagaacaagct
ctagagagggagagattggagaaagagcggcttgagaaggaaagacaagaacgagaacaa
gctctagagagggagagattggagaaagagcggcttgagaaggaaagacaagaacgagaa
caagctctagagagggagagattggaaaaagagcggcttgagaaggaaagacaagaacaa
aaacaagctctagagagggagagattggagaaagagcggcttgagaaagaaagacaagaa
cgagaacaagctctagagagggagagattggagaaagagcagcttgagaagaaaagacaa
gaacaagagaggcaagaaaaagaacaagttctagagagggagaggcaggagaaagaaagg
ctagaaagagaacaagcttttgagagagagagactggaaagagaagctgcattggagaaa
gagagacaagaaatggaaagggcaaaagaacagcaaaggctggagaaagagaaggctgaa
aaagaaagacatgaaagagaagctgctctgaaacgcaagaggcaagagcaagaaaggctt
gagaaagagaaagctttggaagaggaacagttgcagaaagaacaagttcttgagcgtgag
agagaagcacagaggaaagcagaggaggaacgagagcaaactttggaaaaagagaaagag
gagcaggagaggggtttaaaagaagagcagcagagagccttggaggaaagggaaagacat
ttggagcaaaaaagagtgcaggaggaaaaagaaaaggctttgaacattgaaaaagaggaa
gaacatgagaaagaaagagaaagctgtcttcctccgtggaagcgtggtcgtgatatcagt
ggtctctcctatctagcggccgaacctgcttctcagaagagtccaatggagaagccagac
gagagtgagactggtgaatttcagagcgctggcaaagatgctcaatatacagagcctgtc
ccacgaaagtcacccacacttgcaacaccactatccccccaatcgtcttcaaagaagtcc
cgctttctcagagatgctcctgtgacaacttctctaacttcatctccgacttctgtgctg
aagagacctcgtactttctcagacagccccatgccacaaaccccctcagttccattagca
tctaagcctgagggaaaagatgcctcccaggctcatcaaacatcagtccttgcttcagcc
tccaatgagcttgagaacaagacccctgaggtgcctgccaaacaacatgcacaacaagag
gaaaagatggagacatcagagaatagtgaggcaagcaaagatactaaacaaaagccactc
agaagagagaaggatgaggagaaacctctttcagatgagaagaaaagaggaagagagagg
gaaaagaagcaggtggagaagaaaagaagaaaatcatcatcctccagtgagtcctcctca
tcaaactcggattctgggtcttcatcctcctcctcacggtcctccagttcatcgtcatca
tcatcggaggaggagaaaattaattgctcttcaggtgataggaagtctaaagaagtacag
aaagagtcttcatctcaggccacagaaaaagttgtggctgaaaagcctcctacagcccaa
tgcaaaaaacgagtcttcacaaggcaggagggaaaagacacgggcaaagaggaagtaatc
caaaccaaaaaaccctgccttgaactacaagatgagaaggtaacaaggggaagaaaggca
gagattgaagatgatgacactaacaaagacactgccagtgaggtgaaggaggctgtcatg
gcggagcctgagaaggttccagagagcagtgaggagagcaccacggcaaagaccttctct
gcccgaaggatttctctcggcagcagcaaacaatctcctggggtggtgagttcggagggg
gaagcagaagctgcaagcagtgctatcgctggcaggaagaggagatggggctccagtaca
gctgtcactgccaagaaaccctccatcagtatcaccacagactctttgaagtctttaata
ccagacatcaagcctgccttgggtcaggaggctgtgttagacctgcatccagaggagatg
catctctctggggaggaggaaggaggagagaggggcgaccaagacctgaaaattagaaga
actgtaacacaggttgtgccctctgacacccaagagaatggacagaaagaatctaaaaga
agtgaacatgaggatgaggaagaaagaagtgaagggcaggatagacttagccaggaggaa
aaaattgaaggctcgattcaggtttccatggagatggagccatcatcccctgggcgagac
attgatatgaagacggtcactcccagtgacacactcattcgccgttccattagccagcag
aagtcgggtgtgagtatcaccattgatgacccggtccgcacagccaaacagccctctcca
cctcgtggcaagctgtctaacattgtccatgtctgcaacctggtgaggccgtttaccctg
gggcagttgaaggagctgttgaaccgcacggggactgtagtggaggaaggtttctggatt
gataagattaaatctcactgttatgtcacatactctagtgtggaagaggcgatgtccact
cgtacagcactacatggggttaagtggccccagagtaaccctaagttcctcagtgttgat
ttctgcatgcaagaggagttggacttccacaggggtttgggtccagctggagaaaagcca
acagaggagcctcatggggcggcagccgctgggcctggccgtccaatacccccgcctctc
cttccagagcgtgatcagtgggcagaacgagaaagggaaatggaaaggagggagagagca
cgtgcagagagggaatgggaccgagataaagtgagagacttcagcaaacttggagaggag
cgggaagctggggccagaagatcgcgttcacgagatcgcgaaaggcggcgcaaagaacgg
ggaaagagcaaagagaagaaaacggataaaaaggaaaaactagaggatccacctgctaaa
ctgctggatgacctcttccgcaaaaccaaagcggctccgtgcatatactggcttcccctg
actgaggagctggcggcacagagggctgcggctcgtgccgagcgcatgagggaaagagag
aagaggaggaaggagatggaagaggaggataaaaaacgtgatgaggagcgacgagagagg
atgaagaccggcggggccacgggaggggaaggtgagagagaccgagacagagaccgagac
cgaggtcgagaaagggagcgagagggggataaaaggaaggaaggataccgcaggcctggt
ggaaacagtgcaagcgggagcaggaggtcacgaagccacagcgaccctccgctcagagat
cgacgacactaa
DBGET
integrated database retrieval system
