Carassius auratus (goldfish): 113044991
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Entry
113044991 CDS
T07313
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113044991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
caua03036
]
113044991
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113044991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
Chromo_MIT1
HTH_Hrp3
MUN
Motif
Other DBs
NCBI-GeneID:
113044991
NCBI-ProteinID:
XP_026060839
Ensembl:
ENSCARG00000036983
UniProt:
A0A6P6JM07
LinkDB
All DBs
Position
27:1121059..1140215
Genome browser
AA seq
2567 aa
AA seq
DB search
MADPIMDLFDDTPLFNLDSLPEDAFSQGSSDPVEEALKLALGHVDAPMDPTLDPGVPILS
DVVTDPAIIPTPLTAPVSVPLQTLQTQQPPQMSHEVSVAPASISVQPSLSVASNSSGAAT
VLLSSPLGVPVSGAQVATQQLQTQQIALTQQAAGQSVPKIVILKGPQGQTQVLQGVTGAT
GSPGKVTFTRVLTGTPLRPGMTVVSGGTMLNATSTGQGQVKVGTGVQRLIQTPNGPMKQV
LLTSVPQTQSQVQTQPVQVQIPAQTQLQSPSQPAQVQAQVQVQPQTQVALQTQDQAPATT
SPGTSAAAGRPQSVTLSAVPQQGEAKRFTLVLQQQPSQGGGQAGTVTVGGTAAAGAGQQG
QQHRLVLGSLPGKLVLQGGQLAAFAQAKAGQTGAQPKVLTIQLQVQQQPNQQGAKFQLVS
GAANAGGSPQVVQISQGQGGQRLAVPLKLLLQPQSSTASSAGGAISVVKVINTSAAGSSS
GTTTTAASSGVRLAKVQEPVRKVETLCKQEKANRIVAEAIARAKARGERNIPRVLNQDEL
PAGQTSADLEGAAGAGGAKKKGGGGGSGGGGSKKKSPSAGGGKVVAGGDKKSKAKFPGVV
SGGGGSKSKSKTKLNTITLVGGKKRKRNASSDHSDIDLSPPVSPRTLEEEMSQKRRSNRQ
VKRKKYTEDLDIKITDDEDEVDADVDVTTTPVSSAGHLQSMGAELHQELDGDGLPSMQFF
VENPSEEDAAIVDKILSMRVTKKEVSPGQYTNVEEFFVKYKNYSYMHCEWASLEQLERDK
RIHQKLKRFKTKQAQMRNIFQEDEEPFNPDYVEVDRILDESHSVDKDNGEPVVYYLVKWS
SLPYEDATWELKEDVDEAKVEEFRKIESRPARLKRTPRPAASAWKKLDESREYKNGNQLR
EYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEMFAVGVQGPFLIIAPLSTIT
NWEREFSNWTDMNAIVYHGSLGSRQMIQQYEMYCKDDKGHLIPGAYKFDALITTFEMILS
DCPELREISWRCVVIDEAHRLKNRNCKLLDSLKMLDPEHKVLLTGTPLQNTVEELFSLLH
FLEPAQFPSEIEFLREFGDLKTEEQVQKLQSILKPMMLRRLKEDVEKNLAPKQETIIEVE
LTDVQKKYYRAILERNFSFLSMGATHNSNVPNLLNTMMELRKCCNHPYLITGAEEKIVAE
LREVYNPLAPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIH
KRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDW
NPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKDS
SVNGIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDIDQILQRRATTITIESEGKGS
TFSKASFVASENRTDIALDDPEFWQKWAKKADLDMDSLNRKNTLVIDTPRIRKQTRQYSS
LRGEGGDLSDMDSDDDYPPHNSRQSRASRRSDRHSGSGYGRTDCFRVEKHLLVYGWGRWR
DILSHARCKRRLSERDVETICRVILVFCLIHYRGDENIKSFIWELITPPENGREPQALLN
HSGLSIPVPRGRKGKRVKAQSSFDVQKVEWIRKYNPDSLLLDDSYRKHLKHQCNKVLLRV
RMLYYLKQEVIGEHADSVLRGADARDIDIWLPEMEQQDVPSGWWDAEADRCLLIGVYKHG
YEMYTTMRADPCLCFVERCGRPNEQDINAEQQAADPELGEGGDYDKYSEDPEFKPASRHT
KEAYEEADSLNADGEICVEDRSAPVQVEGPSSGSSDLCYWPTSSSLTARLRRLITAYQRS
YRREQLKIEAAEKGDRRRRRCEQATKLKEIARQERQQRWTRREECDFYRVVSTFGVERIK
KEADAPEGDEHHMDWTRFRSFARLDKKTDESLTRYFKCFMSMCQRVCHFRPARGEESQDL
SQSLAPITEERASRTLYRVSLMCRLRERVLPHPSLEERLSLAPLSSDLPNWWSIPQHDHE
LLLAAARHGVSRTELSIFPDPQYSFSQARLDYLQNQAQAASQIHALSQSQGPTSIKEESL
DDESRLLGVEALCPSDSPAMLLTHSEGKVGVQAGWGWKKSKNNGPSERKEGRERGEGPSD
SDSDSDSGSSSSSRHSGSSDDSGDSDAEREQAAGLKMCDGDEENSILSLTPSQEGAPPES
LTDPLRVDWPKDRVLINRINNLCSLVLTGHWPSGRRYISDIQLNSTSEEHDLGGDLGYPK
LPRKSNSAMSAETLEGRESEFTVKLLKEEGLKLTFSKQALMPNGEGSARKKRKDHELVDT
EGVLHAPRRRDLPNWLKENPDYEVEGDMLELLVNRTKRKRRRKRVEKGAALTGSERVKVI
DIRTGKKFSGIYGPLLQDLREHLEENPDHVVAPEWSETVRSSGFLPESLFHRLLSPHASI
PKKNRHYLSTPSIQTDDPLLGGGEGETLVSDGAYMMDDEDLEDGGHLASSHHFLTPAYDV
KMEPSALDMDGGDSLSQGGYDSSDREAILDDVIMAPKNSDSSSSSED
NT seq
7704 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccattatggacctctttgatgacaccccactgttcaatttggattcccta
ccggaggatgcgttctcccagggatcctcagacccagtcgaggaggcgctgaagttggca
ctgggccatgtggatgcacctatggacccaacactggatcctggtgtccccattctcagt
gatgttgtcacagatccagctataatcccaacacccctcacagctcctgtctctgtccca
ctgcagacccttcaaacacagcagcccccccagatgtcccatgaggtttctgttgccccg
gcttcaatttccgttcagccctctctctcggtggccagtaatagcagtggggcggcgacg
gtcctgctgagctcccctcttggagtacctgtgtccggggctcaagttgccacccagcag
ctgcagactcagcaaatcgcccttacgcaacaggcagcagggcagtcggtcccaaaaatt
gtaatactcaaaggccctcagggtcagactcaagtgctacagggtgtcacaggagccaca
ggctctccaggaaaagtcactttcactagagttctgacagggaccccacttaggccaggg
atgacagttgtttctgggggaacaatgttaaatgcgacatctactgggcagggacaggtc
aaagtaggcactggagttcaaaggctgattcagacaccaaatggcccgatgaagcaggtg
ttactgacctcggtgcctcagactcaatcgcaggttcagacgcagccggtccaggtgcag
atacctgcgcagacgcagctccagtcaccgtcacagccagcacaggtacaggcgcaggtc
caggtgcagcctcagacacaggtggcattacaaacacaggaccaagcgccggctactaca
tcccctggaacgtcagcagcggccggccgacctcaaagtgtcacactttcagctgtgcca
cagcagggggaagcaaagaggttcactctggtgctacagcagcagccctcgcaaggtgga
ggccaggctgggacagtgacagtagggggaacggcagctgcaggggcggggcagcagggc
cagcagcacaggctggtgttgggctctctgccagggaagttagtcctgcagggaggccag
ctggctgctttcgcccaagccaaggcgggtcaaacgggtgcacagccgaaagtgcttacc
attcagctgcaagttcaacagcagcccaaccaacagggagccaagtttcaattggtttct
ggggcagctaatgctggtggcagccctcaggtggtgcagatttctcaaggccaaggagga
caaagactagcagtgcctcttaaactactgctgcagccacagtcaagcactgcttccagt
gctggtggggccatttctgtggttaaagttattaatacctcagctgccggctcttcgtcc
ggcaccactactacagccgcgtcttccggtgtgcgtttggcgaaggtccaggagcccgtg
cgaaaagtggagaccttgtgcaaacaggagaaagcaaatcgcattgttgctgaggccatc
gcacgggccaaagccaggggtgaaaggaacatcccccgtgtgctcaaccaggatgaactg
cctgctggacagacttctgcagacctagaaggtgccgcaggagcgggaggagccaaaaag
aaaggaggaggtggaggtagtggtggtggagggagcaagaaaaaaagcccaagtgcgggc
ggagggaaagtggtggcgggaggagacaagaaatccaaggcgaagtttccaggagtggtt
tctggagggggaggcagtaaaagtaaatccaagactaaactcaacaccatcactctagtg
ggtggtaagaaaagaaaaagaaatgcatcctctgaccattcagatatagatctaagccca
cctgtttcaccccgcacactggaggaggaaatgtcgcagaagcgacgttctaaccgtcag
gtgaagcggaagaagtacacagaggatttggacattaaaatcactgatgacgaagatgaa
gtcgatgcagatgttgatgtaaccacaactcctgtgtctagtgcagggcatctgcagtct
atgggagcagaactccatcaggaactggatggggatggtcttcccagcatgcagtttttt
gtggagaacccaagtgaggaggatgctgctattgtggataaaatattgtctatgcgggtg
accaaaaaggaggtgtctccagggcagtatactaatgtggaagaattttttgtcaaatat
aaaaactactcgtacatgcactgtgaatgggccagtcttgagcagctggaaagagacaag
agaatccatcagaagctgaagagattcaagacaaaacaggcacagatgaggaacatattc
caggaggatgaggaacctttcaatccagactatgtggaggttgatcgtattttggatgag
tcacatagtgtggataaagacaatggggagccagtagtgtactacctagtgaagtggtcc
tctctgccctatgaagatgctacctgggagctgaaggaggatgttgatgaagcaaaggtg
gaagaattcaggaagattgaaagccgcccagcccgactcaagagaactcctcgacctgct
gcaagtgcctggaagaagcttgatgagtccagagagtataagaatgggaaccagctccga
gagtaccagctggaaggagtcaactggctgctcttcaactggtacaacaggcaaaactgc
atcctggcagatgaaatgggtctggggaagaccattcagtccatagccctgctctcagag
atgtttgctgtaggggtccaggggccgttcctcatcattgctcctctatccactatcaca
aactgggagagagagttttccaactggacagatatgaatgctattgtttaccacggcagt
ctgggcagtagacagatgatccaacagtatgaaatgtactgcaaagatgacaagggacac
ttgataccaggggcctataaatttgatgctctgatcacaacctttgagatgattctatca
gattgccccgagctgagggagatttcttggcgttgtgtagttattgatgaagctcaccgt
ttgaagaatagaaactgcaaactgcttgacagcctcaagatgcttgaccctgagcataaa
gtgttgttaacaggcactccacttcaaaacactgtagaggagctgttcagtttgctgcac
tttctggagccggctcagttcccctcagagatagagtttttgcgcgagtttggagatctt
aaaacagaggagcaggtccagaaactacagtccattctaaagcccatgatgctgcgtaga
ctgaaagaagatgtagaaaagaaccttgctccaaaacaagagaccattattgaggtggag
ttgactgatgtacagaagaagtattaccgtgctattctagaacgtaacttcagcttcctt
agcatgggagccacacataacagcaatgttcccaatctcctcaacacaatgatggaactt
cgaaagtgttgcaaccacccatacctcattacaggggctgaggagaagatagtggccgag
ctgagagaggtgtataatcctctggctccagactttcatctccaggctctggtgcgctct
gcagggaaactggtcttgctggataagctgcttcctcgccttaaggctggcgggcacaag
gtgctcatcttctcacagatggtgcgatgcctcgacatccttgaggactacctcatacac
aagagatacctgtatgagcgcattgacgggcgggtcagaggaaacctgcgacaagcggcc
attgatcgctttagtaaacccgattcagaccggtttgtcttcctgctttgtacccgggct
gggggtttgggcattaatctgactgctgctgacacttgtgtcattttcgactctgactgg
aatccacagaatgatcttcaagctcaggcacgttgtcatcgtattggtcaatctaaagca
gtgaaggtttatcgtctcattactagaaactcctatgagagggagatgttggacaaagcg
agtcttaaactgggacttgatcgagctgttctgcaaagcatgagtggaaataaggacagc
agtgttaacgggatccagcagttctcaaagaaggagatagaggatttgcttcgtaaaggt
gcttatgcagccattatggatgagaacgacgagggaagccgtttctgtgaggaggacatc
gatcagatacttcagagaagagcaactaccatcactattgagagtgaaggcaaaggatcc
accttttccaaggccagctttgtggcgtctgaaaaccgcacggatattgctctggatgat
cctgagttctggcaaaagtgggccaagaaagctgacttagacatggactctctcaacagg
aagaatactcttgtgattgacacacccagaataagaaagcaaacacgtcagtattccagc
ttgcgtggagagggtggggatctgtctgacatggacagtgatgatgactacccaccccat
aattcccgacaatctcgggcctctcgacgctcagaccggcattctggtagtggttatggg
cgcacagactgcttcagagtggaaaaacacctacttgtttatggatggggccgttggcgg
gatatcctgtctcatgctcgctgtaagcggcgtcttagtgaacgggacgtggaaaccatc
tgccgtgtcatcctggttttctgtctgatacattaccgtggagatgagaacatcaagagc
ttcatctgggagctaatcacccctccagagaatggacgagaaccacaggctctgcttaat
cactctggtctgtccatccctgtacctcgtggcaggaaagggaaacgagtcaaggctcag
agctcttttgatgtgcagaaagttgagtggatccgaaagtataatcctgatagtcttctg
cttgatgacagttaccgaaaacacctgaagcaccagtgcaataaagtgttgctgagagtg
cgtatgctgtattacctgaaacaggaggtcattggagaacatgctgattctgtattgaga
ggagctgatgcaagggatattgatatctggttgcctgaaatggagcagcaggacgttccg
tctggatggtgggatgcagaagccgaccgatgcttgcttatcggcgtctataagcatgga
tatgagatgtacaccactatgcgtgccgacccctgcttgtgttttgttgagcgatgtggc
cgtccaaatgagcaggacataaatgcggagcagcaagcagcagacccagagcttggggag
ggaggggactatgacaagtactcagaagatcctgaattcaaacctgcgtcaagacacacc
aaggaggcatatgaagaggctgattcgttgaatgcagatggagagatttgtgtggaggat
cgctctgcccctgtgcaggttgaggggccatcttctggatcgtcagatttgtgttactgg
ccaacaagctcatcgctcacagccagactacgccgtcttattacagcctaccaacgcagt
tacagacgagagcagcttaagatagaggcagcagagaagggcgaccgtagacgtagacgc
tgtgaacaagccacaaagctgaaagagatagcccgacaagaacgacaacaaaggtggact
cgtagggaggagtgtgatttttacagggtggtatcaacctttggggtcgaaagaataaag
aaagaagcagatgctccggaaggggatgagcatcatatggactggactcgcttccgttct
tttgctcgccttgataagaaaaccgacgagagtttgacgcgttacttcaaatgctttatg
tccatgtgtcagagagtgtgtcactttcggccagctcgtggagaagaatctcaagatttg
tcccagtctctggcccccatcacagaagaacgagcctcgcgcacgctctacagggtcagc
ttgatgtgtcggttacgtgagcgtgttcttccccacccctcattggaggaacgcctcagt
ctggcaccactctcctctgaccttcccaactggtggagcatcccacagcacgaccacgag
ctgctcttggctgccgctagacatggcgtcagccgcactgaactctcaatcttccctgac
ccacagtactcattcagtcaggcccgcctcgactacctccagaaccaagcccaagccgct
tcgcagattcacgcgttaagtcagtcacagggtccaaccagtatcaaagaggagagccta
gatgatgagtctcggctgctgggggtggaggccctctgtccgtcagactctccagccatg
ctcctcacccattctgaggggaaagtgggagttcaggctggatggggctggaagaagagc
aaaaacaatgggcctagtgagagaaaagaaggaagagagagaggtgaagggccttcggac
tccgattctgattcagactcgggctcgtcttcctcctcccgtcattctggcagctcagat
gatagcggagacagtgatgccgagagagaacaagcagcaggtcttaagatgtgcgacggc
gatgaagaaaacagcatcctctccctcactccatctcaagaaggcgccccacccgaatcc
ctcactgaccctctgagagttgattggcccaaagaccgcgtgttaataaaccgaataaac
aacctctgctcgctagttctaacggggcactggccgtcaggtcgacgctacatctctgac
atacagctcaattctacatctgaagagcatgacctcggaggggaccttggttaccccaaa
ttgccacggaaaagcaacagtgccatgtctgcagaaactcttgaaggccgagaatcagag
ttcacagtaaaactcctaaaggaggaggggctgaagctgacattttctaagcaggctctc
atgccaaacggtgaagggagtgcacgcaaaaagagaaaggaccacgagctggtagatacg
gaaggggttctccatgctccccgcagaagggaccttcctaactggctcaaagaaaaccca
gattatgaagtggagggagacatgttagaattactggtgaaccgaaccaaaagaaagagg
aggaggaagagggtagagaaaggagcagcacttaccggaagtgagagagtgaaggtcata
gacataaggacaggcaagaagtttagtggaatatacgggcctttactacaggacctgaga
gagcacctggaggagaaccctgaccacgttgtagcaccagaatggtctgagactgttcgc
agttcgggcttcttgcctgagagtttattccacagactgttgagtcctcacgcttcaatc
cccaaaaagaatcgacattacctctccaccccttcgatccagactgatgaccctctcctg
ggaggcggcgaaggcgagacgttagtttctgacggcgcatacatgatggacgacgaggac
ttagaggacggcggtcacctcgcgtcatcgcaccacttccttactccagcctacgatgtg
aagatggagccgagcgctcttgatatggacggaggcgacagtttatcacaaggtggctat
gatagctctgacagagaggccattttggatgatgtcatcatggcaccgaagaattcagac
tcttcctcaagctccgaggattga
DBGET
integrated database retrieval system
