Carassius auratus (goldfish): 113045100
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Entry
113045100 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: protein strawberry notch homolog 2-like
KO
K26273
protein strawberry notch
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
caua03036
]
113045100
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113045100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Motif
Other DBs
NCBI-GeneID:
113045100
NCBI-ProteinID:
XP_026061056
Ensembl:
ENSCARG00000014032
UniProt:
A0A6P6JML7
LinkDB
All DBs
Position
27:complement(3114587..3144513)
Genome browser
AA seq
1591 aa
AA seq
DB search
MPILAASVVMETEDYLHPEGPQLGSPRFSAPSPPLTSSMESQLYPSSSWTYPQQTPYSQH
YPMQSGRQLQPNPSSVSLDLPDIDFHDLVQNGDFSQDLPCIDDLSNQSLFSSPSDSLSEY
PDPSGFAVNGLAQLSTEGPAAPMYWDTPGHSQRPQNLSAFSGRLDDLSALLSASVAGFKT
AAPPPLEEEEEADEEETEELGHADTYAEYKPSKSTIGNSHPDFVVETNTLSSVPPPDITY
TLSIPDSTISSSRLSALQLEAIIYACQQHEVILQNGQRAGFLIGDGAGVGKGRTVAGIIL
ENFLKGRKRALWFSVSNDLKYDAERDLKDIDAPNIPVFALNKIKYGDTATSEGVLFATYS
ALIGESQAGGQHRTRLKQILDWCKPNFDGVIVFDECHKAKNATSTKMGKAVLDLQSKLPR
ARVVYASATGASEPKNMIYMSRLGIWGQGTPFKTFEDFLHAIEKRGVGAMEIVAMDMKVS
GMYIARQLSFSGVSFRIEEITLDQEFKLVYNKAARLWAEALELFSRAADTLGLASRKSLW
GQFWASHQRFFKYLCIAAKVRRLVELAHTELQYGKCIVIGLQSTGEARTREVLDENDGHL
DRFVSAAEGVFQSLVQKHFPTQKPKREKSAASKRKRKPRGRTAKFPKHCMEVGEVIKISD
DSDSDSDEIDSDSNSSPDSLQDSDDVIFVNHINGPAAKLEELKLRLLGKIAELGKELPLN
TLDELIDRFGGPEKVSEMTGRKGRVVRRPDGSVRYETRAEQGLTIDHVNIREKERFMTGE
KLIAIISEAASSGISLQADRRVPNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEY
IFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSQYNFENKYGTKALDKITKA
ILGYIDNKVPPPKGYPGGDIMFFRDMKKGMIDVGIFCKEPRLGLNTEKDCSITKFLNRIL
GLEVHQQNSLFQYFTDNFDYLINKDKKEGKYDMGILDLAPGNDEIHEETQEKFLTPGNPQ
EGQVILYKISVDRGMHWKEACSKAEKLTGVYEGFYLSNKLRGSQPCVLLAEQGRGRNLVL
YKPNIGKQAHPENLDNLLLRYYKVTPDEAEDFWKSQFDFSFTKCTHANWNGKCKLIEQGQ
ECFLGMRLRQYHMLCGALLRVWKRVSDIVSDITNSSILQIVRLKTKLNSKQVGIKIPESC
VSRVRAELSRMDGEVKKARLERERFANDQRLRQQMLAKMINARKLIANPPHLLQNHPHFP
RSLAAKPKSEAISEVLDLTISPCPSPDIKTPAPDLNGMSLNGGMLGGRGRSCAAVPETFN
LEDLISQEQQRHRQVALTPNMRMLSSSSHATTNVSQPHVPTLKQSHSFGVLTQQQQQQSG
SRAILSQMHRGQDKSLMLQLFMQMQQQPGVSTQSPHIALHQNSQHMAHTSNTHLLSKPHA
NEHAQSQSFQSQSLPSQPQAMQSHATQPTTTTTERTNDEFDFDDLDFGYPSPDSQLQYPF
TSQALPSSTPPPPPYSSSLFASAPTNSSLSDSSSSSSHFTPSSSSSEQTHLLPNGHSSID
ALETLDHMIHGAPSDHRQSVIQFKTLDWDAT
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgcccattcttgccgcgtctgttgtgatggaaacggaggactatctgcaccccgagggc
cctcagctggggagcccgaggttcagcgcacccagtcctcctctcacaagttccatggag
agtcagctgtatccgtcaagctcatggacgtaccctcagcaaactccctacagccagcac
tatcctatgcaatctgggaggcagctccagccaaacccgtcctccgtgtctctggacctg
cctgacatagactttcatgacctcgtgcagaacggagatttctcccaggatctgccgtgc
atagatgacctgtccaaccagtcactgttctcctctccgtctgattctctgtccgagtat
cctgacccttcaggatttgcggtcaatggcctagcacagttatccaccgaaggccccgcg
gcacccatgtactgggatacacccggacacagtcagagaccgcagaacctgagcgcgttt
tctggtaggttggatgatcttagcgctctcctgtctgcatcagttgcaggatttaagact
gctgctcctccgccgctggaggaagaggaggaggcagacgaggaagagacggaggagttg
gggcacgcagacacatacgccgaatacaaaccatccaaatctactataggaaactctcat
cctgatttcgtggtggagaccaacacactgtccagcgttcctcctcctgacatcacctac
acactgtccattcccgacagcaccattagctccagccggctgtctgccctgcagctggag
gccatcatctacgcctgccagcaacacgaggtgattcttcagaacggtcagagggcaggg
tttctgatcggagacggagccggagtcgggaagggccgcactgtggccggaatcatattg
gagaatttcttaaagggacggaagagagcgctgtggttcagtgtgtcaaatgacctgaag
tacgatgctgagagagatctcaaagacatagacgctcccaacatccctgtgtttgcttta
aataagattaaatacggcgatacggctacctcagaaggcgttttattcgccacatactca
gctctgattggagagagccaagccggcggtcagcaccgcaccagactcaaacagatcctg
gactggtgcaaacccaactttgacggagtcattgtgtttgacgagtgccataaggctaaa
aatgcgacctctactaagatgggtaaagcagtcctggacttgcagagcaaacttccccgg
gcgagagtggtgtacgctagtgccacaggtgcttctgagccaaagaatatgatctacatg
agccgactggggatctgggggcaaggaacgccgttcaagacgtttgaagacttcctgcat
gctattgagaagaggggtgtcggagcgatggagattgtggctatggatatgaaagtgagt
ggcatgtacatcgcacgccagctgagcttttccggcgtgtcgttccgtatagaagagatc
acactggaccaagagttcaaactggtctacaacaaagccgccagactgtgggccgaggct
ctcgagctgttctccagagctgctgatacactgggtctggcgtcccgtaagtctctgtgg
ggtcagttctgggcgtcacaccagaggttttttaagtatctgtgcatcgccgctaaagtc
cgtcgtctggtcgaactcgctcatactgaattgcagtacggcaagtgcatcgtgattggc
ctgcagtccaccggagaggctcgtactcgagaggtgctggacgagaacgacggacacctg
gacagattcgtctccgctgctgagggtgttttccagtcattagttcagaaacacttccca
acacagaaacccaaaagagagaaaagcgccgcaagcaagaggaaacgaaaacccagaggc
cggactgcaaaatttccaaagcactgcatggaagtgggcgaggttattaaaatcagcgac
gactcggactccgactcggacgagattgacagcgactctaactcctcgcctgattcacta
caggacagtgatgatgtgattttcgtcaaccacatcaatggacctgctgctaaactagaa
gaactcaagctgaggctgctgggtaaaatagcagagctggggaaagagctgccgctcaac
actcttgatgagctgattgacaggtttggaggaccagagaaagtgtccgagatgacgggt
cgtaaggggcgtgtggtgcggcgtcctgatggcagcgttcggtatgagaccagagcggag
cagggcctgaccatcgaccatgtcaacatcagagagaaagagcgcttcatgaccggagag
aagctgatagccatcatctctgaagcagctagttcaggcatctctctacaggcggataga
cgtgtgccgaaccaaaggagacgagttcacatgaccctagagctgccgtggagcgcagac
cgagccatccagcagttcggtcgaacgcatcgctctaatcaggttacagctccagagtac
atcttcctcatctctgaacttgctggagagagacgcttcgcctccatcgtcgccaagaga
ttggagagcctgggggcgctgacacacggggaccggcgagccaccgaatccagagacctg
agccagtacaactttgagaacaaatatggcaccaaagcgttggataagatcactaaagcc
atcctcgggtacatcgacaacaaagtccctccaccgaagggctacccaggaggagacatc
atgttcttcagagatatgaagaaaggcatgattgatgtgggaatcttctgtaaggagccg
cgtctgggtctgaatacagagaaagactgctccatcactaagtttctgaaccgtattttg
ggtttggaggtccatcagcagaactctctgttccagtacttcacagataacttcgactac
ctgatcaacaaggacaaaaaagagggcaaatatgacatggggatactggatcttgctcct
ggtaatgacgagattcatgaggagacacaggagaagtttttaactccaggaaaccctcag
gagggccaggtcatcctctataagatcagcgtggatcgtgggatgcactggaaggaggcc
tgcagtaaagcagagaaactcaccggagtctatgaaggcttttacctctcaaacaagctg
cgcgggagtcagccgtgtgtcctgctcgccgaacagggtcggggtcgcaatctcgttctg
tacaaacccaacatcggtaaacaagcgcatcctgagaacctggacaacctgctgctgaga
tactataaggtgacgcccgacgaagcagaggatttctggaagagtcagtttgacttttct
ttcaccaaatgcacgcatgccaactggaatggtaagtgtaagctgatcgagcagggccag
gagtgttttctggggatgcgtctcagacagtatcacatgttgtgtggagcgctgctcagg
gtctggaaacgagtgtctgacatcgtctcagacatcaccaactccagcatcctgcagatc
gtacggctcaaaaccaaactgaacagcaagcaagtcggtataaaaatcccagagagctgc
gtgtctcgtgtgcgcgctgagctctctcggatggacggggaggtgaagaaagcgcgactg
gagagagagaggttcgcaaatgaccagcgtctgcgtcaacagatgctagccaagatgatc
aacgcccgcaagctcatcgcaaatcctccacacttgcttcagaaccaccctcacttccca
cgatcccttgcggcgaagccaaagagcgaagccatcagcgaagtcctggatctgaccatc
agcccctgcccatcgccggacatcaaaacgcccgcaccagacctaaacggcatgtcgcta
aacggaggcatgctaggtggaagaggacgctcgtgcgcggctgtccccgagacattcaac
ctggaagatttgatttcccaggagcagcagagacacaggcaggtcgcgttaaccccaaac
atgcgcatgttgtcgtcgtcgtcgcatgccactacgaacgtttcgcaaccgcacgttccc
acactaaagcagagtcattcgtttggggtgctaacacagcagcagcagcaacagagcggc
tcgcgtgcgattttatcgcagatgcaccgaggccaagacaagtcgctcatgctgcagctt
ttcatgcaaatgcaacagcaacccggcgtgtcgacgcaatccccgcacattgcgctgcac
cagaacagtcaacacatggcgcacacttcaaacacacacttgctgtcgaaaccgcacgcg
aacgaacatgcacagtcgcaatcctttcagtcgcaatccctgccgtcgcaaccccaagcc
atgcaatcgcatgccactcagcctactactactactacagaaagaacgaacgatgagttt
gatttcgacgacttggacttcggttacccctcccccgattcgcaacttcaatacccgttc
acctcacaagccctgccatcctcgactccgccccctcctccttactcctcctccttattc
gcatcagcgcctacaaactcctccctctcagactctagctcctcctcctcacacttcaca
ccgtcatcctcttcctccgaacagacgcatctgttaccaaacggccacagcagtatagat
gccctggagacgctggatcacatgatccatggagcgccctcggatcaccgccagtccgtc
atccagttcaaaacattggactgggatgccacataa
DBGET
integrated database retrieval system
