Carassius auratus (goldfish): 113045149
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Entry
113045149 CDS
T07313
Name
(RefSeq) deubiquitinating protein VCIP135-like
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
caua01002
]
113045149
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113045149
Enzymes [BR:
caua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113045149
Peptidases and inhibitors [BR:
caua01002
]
Cysteine peptidases
Family C64
113045149
Ubiquitin system [BR:
caua04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
113045149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
DUF5817
Gla
Motif
Other DBs
NCBI-GeneID:
113045149
NCBI-ProteinID:
XP_026061129
Ensembl:
ENSCARG00000017241
UniProt:
A0A6P6JMT1
LinkDB
All DBs
Position
27:4732133..4738837
Genome browser
AA seq
1108 aa
AA seq
DB search
MSLIPGSKQKDRRILCGMCPDPQCQAKLFFPAHTSMSIECTECGQRHEQKNLANVEEVTD
PDVVLHNLLRNALLGVSGPPKKGSELVKVMGLSNYHCKLLSPILTRYGMDKQTGTAKLLK
EMNQGEIFDCSLLGDRAFLIEQEHVSTVGYGRDRSGSLIYLHDTLEEIKKANLNRECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKLNFKQNLDRYKALFQDFIDAAEWEDII
NECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVPEE
QCRGKDGTLNKPICIAWSSSGRNHYLPLVGIKGLPLPRLPAALLPKAWGVPQELIRKYVS
LDSNGSCVIGGERSLQDKYLLRLVGVMEDVFMDKHGIHPALVADVHQYIYRRTGVIGVQP
EEVTEAAKKSVQEGRLHRCLVCNALSELHVPAEWLIPGGKLYNLAKSTHGTLRADKNYSF
PLNSLVCSYNPEKDVLVPDYKLGSLTACTWCHGTSVRRVHGDGSVVYLDGDRTNTHSQGG
KCGCGFKHFWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYETDPTLNSNVYDVTMRLV
TKHFPGEFGSEILVQKVVNTILHHTAKRSQDEYNPVAIEGAHVQDGRDGSESTTHPPTKI
ILTGQKGKTLHKEELVMSKTERVLQHSISEQAALSQRRSTDRLRQQDPRPPSPSSSSSSA
PPTPTKVPPPSGEKKIRVTTSDGRQAMLTLQPHTTYGELQNSIVQVFNLLPGQLCIRHGF
PPRELPPPRPEDQNQPVALQHGDRISVEALKESSPDTHMTQTHSHTPQTHAHSDPRLSRT
SSREIQDNIDLEMSSLCLLAALMGEDVWSYAKKLPHLFQQGGVFYNIVKKDMGLLDGKHC
TLPHLSGKTFVFSAAEERLELCVDTAGHFPVGPDVEELVQEALSQLRSDAASHSREGSPA
HGLRLGAGGAVRKKEQTVTAFQGKGHSLGSAPPEHPPIRRQHSSGVDLSNSARGEEITLS
GEELVRVAPGMLTLREGRGLGLEPAVIEAQRQRLQEMVSNIQASMDKHLRQHAVARHDVK
EEEAPDKQEDMESHGAEPPSTFEPMDQS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgattccgggctcaaagcagaaggacaggcgcattttatgcgggatgtgcccg
gacccgcagtgccaggcgaagctcttcttccccgcacacacctccatgagcatcgagtgc
actgaatgcggccagagacacgagcagaagaacctcgcgaatgtggaggaagtaactgac
ccagatgtagttcttcataatttgctgagaaatgctttgctgggtgtgtcaggccctcct
aaaaagggctccgagctggtgaaagtgatgggactgtccaactatcactgcaagctgctg
tctcccatcctcacccgctatggcatggacaaacagacaggcacggccaaactcttgaag
gaaatgaaccagggagagatcttcgactgctcgcttcttggggaccgtgcttttctcatc
gagcaagagcatgtgtccactgttgggtatggacgggacaggtcagggagcttgatctac
cttcatgatactttggaggaaatcaagaaagcaaacttgaatagagagtgtcttattccc
gtgcatgtggatggagacggacactgcttggtgcacgccgtgtccagagcactagttgga
cgtgagctcttctggcatgcccttcgagaaaacctaaaactcaatttcaagcagaacctc
gaccgctacaaagcccttttccaggactttatagatgctgcagaatgggaagatatcatt
aatgagtgtgacccattgtttgttcctccagaaggcgttcccctggggcttaggaacatt
cacatattcggcctggcgaatgtactgcacagacccataatcctgttggactccctgagt
ggcatgcgcagctcgggcgattactccgccactttcctgccaggcctggttccagaggag
cagtgccgaggaaaagatggcactctgaacaagcccatctgcatcgcctggagtagctct
ggcagaaatcactatctacccctcgtgggcatcaagggcttgcctttgccccgtctacca
gctgcattgctcccgaaagcttggggtgttcctcaagagctgattcgcaaatacgtgagc
ttggactccaatggaagctgtgtgatcggtggcgaacggagcctgcaggataagtacctg
ctgcggctcgtaggcgtgatggaggatgtcttcatggacaagcacggcatccaccccgct
ctagtcgccgatgtccaccagtatatataccgacgcactggagtgatcggcgtgcagccg
gaggaggtgacagaagcggctaagaaatctgttcaggagggtcgtctccatcgctgcctt
gtctgcaatgctctttcagagctccacgtcccagcagagtggctcataccgggagggaaa
ctctacaacttggccaagtcgactcacgggactctgcgggcggacaagaactacagcttt
cctttaaatagtttggtttgttcctataacccagaaaaagatgtgctggtgcccgactac
aagcttggctcactcacggcttgcacctggtgtcacggtacttcagtgcgacgcgttcat
ggcgacggctctgtcgtctatttggatggagaccgtaccaacactcactcacaaggtggg
aagtgtgggtgcgggttcaaacacttctgggaggggaaggagtacgataatcttcccgaa
gctttccctatcactctggagtggggcggccgtgtggtgcgagagaccgtttattggttc
cagtatgaaacggatccgactctcaacagcaatgtttatgacgtgacgatgcgacttgtc
acgaagcactttcccggagagttcggaagtgagattctagtccaaaaagtggtgaacacc
atcttgcatcacactgccaagaggagccaagatgaatacaatccagttgccatcgaaggt
gctcatgttcaggatgggagagatgggagcgaatcaaccactcaccctcctactaaaatc
atcttgacgggacagaaaggcaaaaccctgcataaagaagagctggtgatgagtaaaacc
gagagggtcttgcaacatagcatcagcgagcaggcggccttgtcccagcggcgtagcaca
gaccgcttgcgccagcaggatccccgcccaccatctccttcctcttcatcatcctctgct
cctcccacacccactaaagtgccaccccccagtggagagaagaagatacgtgtaacgacc
agcgatgggcggcaggccatgcttacactgcaaccgcacaccacctacggtgagctccaa
aactccattgtccaggtcttcaacttattgcccggacagctgtgcatccgacacggcttc
ccacccagagagctgcccccaccgcgtcctgaggaccagaaccaacccgtggcgcttcag
catggcgaccgcatatctgtggaagcgctaaaagagagctcgcccgatactcacatgacc
cagacgcactctcacacacctcaaacgcatgctcactctgacccacgactcagccgcacc
agtagcagggaaattcaggacaacattgaccttgagatgtcatcactttgtctcctggca
gcacttatgggtgaagatgtctggtcatatgccaagaaactgcctcacctgttccaacaa
ggaggagtcttctacaatattgtgaagaaagacatgggtctgttagatgggaagcactgc
acactgccccatttgtcgggtaagacgtttgtgttcagtgctgcagaggagcgtttggag
ctgtgtgtggacacagccggtcattttccagtgggccctgatgtggaggagctcgtccag
gaggccctttcccaactccgctcagacgcagcctctcatagccgtgagggaagccccgct
cacggcctgcgattgggcgccggcggtgcagtgcgcaagaaagagcagactgtcacggcc
ttccagggcaaaggtcactcactgggttccgcccctccagaacacccaccaatcaggcgg
cagcacagcagtggcgtggatctcagcaacagcgctcgcggtgaagagataacattgtca
ggggaagagttggtgcgcgtggccccgggcatgctcactttacgcgagggccgcggtttg
gggctggagcctgccgttatcgaggcccaacggcagcgtctgcaggagatggtctcaaac
atacaagcgtctatggacaaacacttgcgccagcacgctgtagcaaggcatgatgtgaag
gaagaagaggctcctgacaaacaagaggatatggaaagtcacggtgcggagccacccagc
acctttgaacccatggaccaatcttga
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integrated database retrieval system
