KEGG   Carassius auratus (goldfish): 113045365
Entry
113045365         CDS       T07313                                 
Name
(RefSeq) integrin beta-1-like isoform X1
  KO
K05719  integrin beta 1
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03271  Virion - Rotavirus
caua04145  Phagocytosis
caua04510  Focal adhesion
caua04512  ECM-receptor interaction
caua04514  Cell adhesion molecule (CAM) interaction
caua04517  IgSF CAM signaling
caua04518  Integrin signaling
caua04530  Tight junction
caua04810  Regulation of actin cytoskeleton
caua04820  Cytoskeleton in muscle cells
caua05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    113045365
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113045365
   04514 Cell adhesion molecule (CAM) interaction
    113045365
   04517 IgSF CAM signaling
    113045365
   04518 Integrin signaling
    113045365
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    113045365
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113045365
   04530 Tight junction
    113045365
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113045365
   04810 Regulation of actin cytoskeleton
    113045365
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    113045365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:caua04131]
    113045365
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:caua04147]
    113045365
   04515 Cell adhesion molecules [BR:caua04515]
    113045365
   04090 CD molecules [BR:caua04090]
    113045365
Membrane trafficking [BR:caua04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    113045365
Exosome [BR:caua04147]
 Exosomal proteins
  Proteins found in most exosomes
   113045365
Cell adhesion molecules [BR:caua04515]
 Integrins
  Integrin beta subunits
   113045365
CD molecules [BR:caua04090]
 Proteins
  113045365
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 113045365
NCBI-ProteinID: XP_026061499
Ensembl: ENSCARG00000004916
UniProt: A0A6P6JNV9
LinkDB
Position
27:complement(8903909..8922638)
AA seq 802 aa
MDVRLLLISVLLGLSRAQLDGNECTKASAQSCGECIQVGEKCGWCTDENFLKQGEQKSTR
CDEIEALIKKGCNKSSIENPRGNVTVSKNQSLTEHTNSTKDGAKLKPDQITQIQPQKLTL
DLRSGEAQKFVLTFRRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTKLMTEMQKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTSDQNCTSPFSYKNVLSLTSDGSQFNTLVSKQQI
SGNLDSPEGGFDAIMQVAVCANQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLQDNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTKEFQPVYQELKNLIPKSAVGTLS
SDSGNVINLIIDAYNSLSSEIILENSRLPEGVSISYISHCKNGVSQEGENGRKCSNIAIG
DQVTFEVAVTAKGCPSNGKSETLKIKPLGFTEEVEIVLNFICECECHKEGIPNSPNCSDG
NGTLECGACRCNEGRIGRVCECSKDEVRTEDLDANCRMDNGTDICSNNGDCVCGTCECKK
RDNPEERYSGKFCECDNFNCDRSNNKLCGGHGRCECRKCICDANYTGSACDCSLDTSTCM
ASNKQICNGRGTCECGTCKCIDTKFQGQTCEICPTCPGVCTEHKDCVQCRAFGSGDKKDT
CEKECTNFDLKMVKKKEELPQPNDQPYINHCKERDANDCWFFFTYATRNDSTVVVHVAEE
LECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDAQEN
PIYKSPINKFQNPSYGNKGVTL
NT seq 2409 nt   +upstreamnt  +downstreamnt
atggacgtgaggctgctcctgatttctgttcttctgggactcagcagggctcaactagat
ggtaacgaatgcaccaaagcctcggcccagtcctgtggagaatgcattcaggtcggagaa
aagtgtggctggtgtacagacgagaactttttgaagcaaggcgagcagaagtccacacgg
tgtgatgagattgaagctctgattaagaagggctgtaataagtccagtatagaaaatcct
cggggaaatgttaccgtcagcaagaaccaatctttaacagagcacacaaacagcactaag
gatggagcaaaactaaagccagaccagatcacccagattcaaccgcagaaactcacccta
gacctccgatcaggtgaagctcagaagttcgttttgacattcaggagggctgaggattat
cccatagatctctactacctgatggacctcagctactcaatgaaagatgatttagagaac
gtcaaaaacctgggaaccaaactgatgactgaaatgcaaaagatcacatctgacttcagg
atcggctttggctcctttgtggaaaaaactgtcatgccatacatcagcacaacgccagcc
aagctgctaaacccctgcacatcagaccagaactgcacaagcccgttcagctataaaaac
gtgctgagtttgacttccgatggatctcagtttaatacccttgtgagcaaacagcagatc
tcaggaaacctggactcaccagaaggagggttcgacgccatcatgcaagtggctgtctgt
gcgaaccaaattggctggaggaatgtgacccgtctgcttgtgttttccacggatgctgga
ttccactttgctggagacggaaaactgggcggcatcgtgcttcctaatgatgggaaatgc
catctgcaggataacatgtacactatgagccattactatgactatccttcgatcgcacat
ctggttcagaaattaagcgaaaacaacattcagaccatttttgctgtaactaaagagttc
cagcctgtttaccaggagctgaaaaacctcattccaaagtcagctgtgggaacgctgtct
tccgactccggcaatgtgatcaatctcattattgatgcatataattctctgtcttctgag
atcattctggagaacagtaggctccccgaaggtgtgtccatttcctacatctcccactgc
aagaatggagtgagtcaagaaggagaaaatgggagaaagtgctccaacatcgccattggg
gatcaggtgacgtttgaggtagcggtcacggctaagggctgtccatctaatggcaaatca
gagactttaaagatcaagccgctgggtttcactgaggaggtggagatcgtcctcaacttc
atctgtgaatgtgagtgtcataaagaaggaatccctaacagtccaaactgtagcgacggc
aatggcactctggagtgtggagcatgcaggtgcaatgagggacgtattggcagggtttgt
gaatgtagtaaagatgaggtcagaacagaagatctggatgcaaactgccgcatggataac
ggcacggacatctgcagcaacaatggagactgcgtttgtggaacgtgcgagtgcaaaaaa
agagacaacccagaggagagatacagcggaaagttctgcgagtgcgacaacttcaactgt
gaccgctccaacaacaagctctgcggaggtcacggtcgttgtgaatgcaggaagtgtatc
tgtgacgctaactacacaggaagtgcttgcgactgctcattggacacctcaacctgtatg
gccagtaacaaacagatctgtaacggtcggggcacctgcgagtgcggcacgtgtaaatgt
atagacacaaagtttcagggtcaaacctgtgagatctgcccaacctgtcctggagtttgc
actgaacacaaggattgtgtccagtgccgagcatttggttctggtgataagaaagacaca
tgtgagaaagagtgtactaacttcgatcttaaaatggtgaagaagaaggaggaacttcct
cagcccaacgaccagccctacatcaatcactgcaaagagcgtgatgctaacgattgttgg
ttcttcttcacctacgctaccaggaatgacagcaccgttgtggtccatgtggcagaggag
cttgagtgtccctctggccctgacatcatccccattgtagctggtgtggtcgcaggaatc
gttctgattggtttagcacttctgctcatctggaagctgctcatgattattcatgaccgc
agagagttcgccaagttcgagaaagagaagatgaatgccaagtgggatgcgcaagagaac
ccaatatacaagagccccattaataaattccagaatccaagttatggaaataaaggcgtc
acactctga

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