Carassius auratus (goldfish): 113045365
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Entry
113045365 CDS
T07313
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K05719
integrin beta 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03271
Virion - Rotavirus
caua04145
Phagocytosis
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
caua04514
Cell adhesion molecule (CAM) interaction
caua04517
IgSF CAM signaling
caua04518
Integrin signaling
caua04530
Tight junction
caua04810
Regulation of actin cytoskeleton
caua04820
Cytoskeleton in muscle cells
caua05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
113045365
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113045365
04514 Cell adhesion molecule (CAM) interaction
113045365
04517 IgSF CAM signaling
113045365
04518 Integrin signaling
113045365
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
113045365
09144 Cellular community - eukaryotes
04510 Focal adhesion
113045365
04530 Tight junction
113045365
09142 Cell motility
04820 Cytoskeleton in muscle cells
113045365
04810 Regulation of actin cytoskeleton
113045365
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
113045365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113045365
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113045365
04515 Cell adhesion molecules [BR:
caua04515
]
113045365
04090 CD molecules [BR:
caua04090
]
113045365
Membrane trafficking [BR:
caua04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
113045365
Exosome [BR:
caua04147
]
Exosomal proteins
Proteins found in most exosomes
113045365
Cell adhesion molecules [BR:
caua04515
]
Integrins
Integrin beta subunits
113045365
CD molecules [BR:
caua04090
]
Proteins
113045365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
113045365
NCBI-ProteinID:
XP_026061499
Ensembl:
ENSCARG00000004916
UniProt:
A0A6P6JNV9
LinkDB
All DBs
Position
27:complement(8903909..8922638)
Genome browser
AA seq
802 aa
AA seq
DB search
MDVRLLLISVLLGLSRAQLDGNECTKASAQSCGECIQVGEKCGWCTDENFLKQGEQKSTR
CDEIEALIKKGCNKSSIENPRGNVTVSKNQSLTEHTNSTKDGAKLKPDQITQIQPQKLTL
DLRSGEAQKFVLTFRRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTKLMTEMQKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTSDQNCTSPFSYKNVLSLTSDGSQFNTLVSKQQI
SGNLDSPEGGFDAIMQVAVCANQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLQDNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTKEFQPVYQELKNLIPKSAVGTLS
SDSGNVINLIIDAYNSLSSEIILENSRLPEGVSISYISHCKNGVSQEGENGRKCSNIAIG
DQVTFEVAVTAKGCPSNGKSETLKIKPLGFTEEVEIVLNFICECECHKEGIPNSPNCSDG
NGTLECGACRCNEGRIGRVCECSKDEVRTEDLDANCRMDNGTDICSNNGDCVCGTCECKK
RDNPEERYSGKFCECDNFNCDRSNNKLCGGHGRCECRKCICDANYTGSACDCSLDTSTCM
ASNKQICNGRGTCECGTCKCIDTKFQGQTCEICPTCPGVCTEHKDCVQCRAFGSGDKKDT
CEKECTNFDLKMVKKKEELPQPNDQPYINHCKERDANDCWFFFTYATRNDSTVVVHVAEE
LECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDAQEN
PIYKSPINKFQNPSYGNKGVTL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgaggctgctcctgatttctgttcttctgggactcagcagggctcaactagat
ggtaacgaatgcaccaaagcctcggcccagtcctgtggagaatgcattcaggtcggagaa
aagtgtggctggtgtacagacgagaactttttgaagcaaggcgagcagaagtccacacgg
tgtgatgagattgaagctctgattaagaagggctgtaataagtccagtatagaaaatcct
cggggaaatgttaccgtcagcaagaaccaatctttaacagagcacacaaacagcactaag
gatggagcaaaactaaagccagaccagatcacccagattcaaccgcagaaactcacccta
gacctccgatcaggtgaagctcagaagttcgttttgacattcaggagggctgaggattat
cccatagatctctactacctgatggacctcagctactcaatgaaagatgatttagagaac
gtcaaaaacctgggaaccaaactgatgactgaaatgcaaaagatcacatctgacttcagg
atcggctttggctcctttgtggaaaaaactgtcatgccatacatcagcacaacgccagcc
aagctgctaaacccctgcacatcagaccagaactgcacaagcccgttcagctataaaaac
gtgctgagtttgacttccgatggatctcagtttaatacccttgtgagcaaacagcagatc
tcaggaaacctggactcaccagaaggagggttcgacgccatcatgcaagtggctgtctgt
gcgaaccaaattggctggaggaatgtgacccgtctgcttgtgttttccacggatgctgga
ttccactttgctggagacggaaaactgggcggcatcgtgcttcctaatgatgggaaatgc
catctgcaggataacatgtacactatgagccattactatgactatccttcgatcgcacat
ctggttcagaaattaagcgaaaacaacattcagaccatttttgctgtaactaaagagttc
cagcctgtttaccaggagctgaaaaacctcattccaaagtcagctgtgggaacgctgtct
tccgactccggcaatgtgatcaatctcattattgatgcatataattctctgtcttctgag
atcattctggagaacagtaggctccccgaaggtgtgtccatttcctacatctcccactgc
aagaatggagtgagtcaagaaggagaaaatgggagaaagtgctccaacatcgccattggg
gatcaggtgacgtttgaggtagcggtcacggctaagggctgtccatctaatggcaaatca
gagactttaaagatcaagccgctgggtttcactgaggaggtggagatcgtcctcaacttc
atctgtgaatgtgagtgtcataaagaaggaatccctaacagtccaaactgtagcgacggc
aatggcactctggagtgtggagcatgcaggtgcaatgagggacgtattggcagggtttgt
gaatgtagtaaagatgaggtcagaacagaagatctggatgcaaactgccgcatggataac
ggcacggacatctgcagcaacaatggagactgcgtttgtggaacgtgcgagtgcaaaaaa
agagacaacccagaggagagatacagcggaaagttctgcgagtgcgacaacttcaactgt
gaccgctccaacaacaagctctgcggaggtcacggtcgttgtgaatgcaggaagtgtatc
tgtgacgctaactacacaggaagtgcttgcgactgctcattggacacctcaacctgtatg
gccagtaacaaacagatctgtaacggtcggggcacctgcgagtgcggcacgtgtaaatgt
atagacacaaagtttcagggtcaaacctgtgagatctgcccaacctgtcctggagtttgc
actgaacacaaggattgtgtccagtgccgagcatttggttctggtgataagaaagacaca
tgtgagaaagagtgtactaacttcgatcttaaaatggtgaagaagaaggaggaacttcct
cagcccaacgaccagccctacatcaatcactgcaaagagcgtgatgctaacgattgttgg
ttcttcttcacctacgctaccaggaatgacagcaccgttgtggtccatgtggcagaggag
cttgagtgtccctctggccctgacatcatccccattgtagctggtgtggtcgcaggaatc
gttctgattggtttagcacttctgctcatctggaagctgctcatgattattcatgaccgc
agagagttcgccaagttcgagaaagagaagatgaatgccaagtgggatgcgcaagagaac
ccaatatacaagagccccattaataaattccagaatccaagttatggaaataaaggcgtc
acactctga
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integrated database retrieval system