Carassius auratus (goldfish): 113045495
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Entry
113045495 CDS
T07313
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113045495
Spliceosome [BR:
caua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113045495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
113045495
NCBI-ProteinID:
XP_026061682
Ensembl:
ENSCARG00000004120
UniProt:
A0A6P6JQZ5
LinkDB
All DBs
Position
27:complement(11739045..11755788)
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AA seq
555 aa
AA seq
DB search
MLLCSCDRYHTVKNVFPAMDGIASDIAVGVKRSSDELLSGSLYNSPNSSVTANGSDSKKL
RVEDSMDSPPSRVIHIRKLPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAA
VTMVTYYTAVTPQVRNVPVFIQYSNHKELKTDSALNQRAQAVLQAVSAVQEGGSPSSAAG
ESVLTPAPSPVLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPV
NAQQAKLSLDGQNIYNSCCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPPVDPS
VAATLSKDSTSLLGTPSGMVTSYSSGGGFPSSLGAISPLSAAAAAAAAAGRVALSGHSGP
GGVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMSDGNQAQLAMSHLN
GQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFTSSPLHRFKKPGSKNFQNIFPPSAT
LHLSNIPENVTEEDLRLLFSNSGGTVKAFKFFQDRKMALLQTSTVEEAIQALIDLHNYDM
GRGHRLRVSFSKSTI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgctcctctgctcctgcgatcggtatcacaccgtgaagaacgttttccctgcaatggac
ggcattgcaagtgatattgcagttggtgtgaagagaagctcagatgaattgctgtctggc
agtctgtacaacagtccaaactcttcagtcactgctaatggaagtgacagtaagaaactg
agggtggaggacagcatggacagcccaccatccagagtcattcatatccggaaactcccc
aatgaggtttccgagactgaggtcatcgccctgggtttgccatttggaaaggtcactaat
atcctgatgcttaaaggcaaaaatcaggcatttttggagctaggaacagaggaagcagct
gttaccatggtgacgtactacacagctgttacacctcaagtgcgtaatgtcccagtgttc
attcagtactccaaccacaaagagctcaagactgacagtgcactcaaccagcgagctcag
gccgtgctacaggcggtgtccgcagtccaggagggtggctcaccaagctcagcggccggc
gagagtgtgttaacgcctgcccctagcccagtactgcgaataatcatcgacaacatgttc
tacccagtcaccctggacgtcctccaacagatcttctccaagtttgggaccgtcatgaag
ataatcacatttaccaaaaataatcagttccaggctcttctgcagttcagtgacccagta
aatgcccagcaggccaaactgtccttggatggccagaacatatacaactcctgctgcact
ttgcgcatcgacttctccaagctggtcaacctgaatgtaaaatacaacaacgacaaaagt
cgggattacacccggcctgatctgccctcaggagatggtcagccgcccgtggacccgtct
gtggcagccactctcagcaaagattccacctccctgctcggtactccctctggaatggta
acttcctactctagtggtggagggtttccatcttctctaggggccatcagtcctctgagt
gcagcagcagcagcggcggcagcagcagggagggtggcgttgtctggacattcgggacct
ggtggagtgctcctggtcagcaacctcaacgaagagatggttacgccccaaagtctgttt
accctcttcggtgtctacggtgacgtgcagcgcgtgaagatcctttacaataagaaggac
agtgctctaatacagatgtctgatggaaaccaagctcagttagccatgagccatctaaac
gggcagaagatgtatggcaagatcattcgtgtgaccctctccaagcaccagacagtacag
ctgcccagggagggtttagatgatcagggcctgaccaaggacttcaccagttctcctctg
catcgcttcaagaagcctgggtccaaaaacttccagaacatcttccccccttcagctact
ctccatctttctaacatacctgagaatgtgacagaggaggatttacgactgctcttctca
aactccggcggtacagtgaaagcgttcaagtttttccaagatcgcaaaatggctctgctg
cagacgtccacggtggaggaggcgattcaggcactcattgacctccacaactacgacatg
ggccgtggccaccgcctgagagtctctttctcaaagtccaccatctga
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