Carassius auratus (goldfish): 113045561
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Entry
113045561 CDS
T07313
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113045561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113045561
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113045561
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
HECT type E3
113045561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
113045561
NCBI-ProteinID:
XP_026061815
Ensembl:
ENSCARG00000001667
UniProt:
A0A6P6JQD1
LinkDB
All DBs
Position
1:6194938..6216145
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AA seq
1047 aa
AA seq
DB search
MMLCWGSSGSGQLGIGASEASVFEPRSCCMFDGRGLKEVACGSQHSLFLLHDGSVYASGS
NSFGQLGHDKGGWRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGEGGQLGLGA
AEEVVRVPRLIKKLCEHRISQVMCGNQHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLS
PQPLKSLSGIPLALISAGGDHSFALSLSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLR
SQKVVYISCGEEHTAALTKDGGLFTFGNGSRGQLGHDSTRNEPLPRRVMELMGTEVSQIA
CGRHHTLAFVPSTGLVYAFGSNTQGQLGTGLRGNAKSPLPVRNIQPLCIGYTHTKAECYT
VGKIHSGGDHSFLLLSTTKAGSSCPEDFRIMNTTKSIAVINSESLDSWRMKLHDNSDSSI
TNDIILLFSSTACWNASFLDQSDDGHFKTNPKVPGIDFNAVRLLFETLMKPAFARLLEQA
TKSFESLLIPQLPCSPPDVEAMRIYLILSECPALHDSKNYISLTIPLAMAILRLDANPSK
VLDNWWSLMDCEVFSRLVEMYKSIVVFLLTGGKALLMPVFLESYTSAALRLLEKLHKVNL
KAQRVEYNHFYIPDISRLVDIQEDYLKWFLRKADIKMRCPPVQGSVTLCAYPFILNAQAK
TTVLQTDAELQMQMAVSGANLHNVFMLLTMEPLLARNPFLVLHVRRNLLVSDALRELTVY
SDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPIYGMFTQYSESNLLWFSDKCF
VEHNWFHLIGIICGLAIYNSTVVDLHFPLVLYKKLLNVSPTLDDLKELSPTEGRSLQQLL
EYEGDVEETFCLNFAITREYYGITEVKELVQGGKTIAVDKTNRKEFVHAYLQYVFSDSVQ
EQYLAFSSGFLKVCGGEILSLFQPSELMAMVVGNSNYNWEEMEKNASYKGEFSASHPTVK
MFWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMASLRIVIQSTAAEEHYLPVAHTCYNLLD
MPCYQTKETLRHRLTQAVEQYEGFSLV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgctggggaagcagtggctcgggtcagctgggcatcggtgcctcggaggcg
tctgtctttgagccgaggagctgttgcatgttcgacgggaggggtcttaaagaagttgcc
tgcggcagccaacactcgctcttcctgttgcatgatgggagcgtttacgcctctggctcc
aacagctttggtcagctgggccatgacaagggaggatggaggccagagctggttggagct
ctggatgctcagaagatttccggtgtgtcgtgtgggcaagctcactctctggcggtgaac
gagcaggggcaggtgtttgcctggggggctggagaaggagggcagctcggtctgggtgca
gctgaagaggtggtccgtgtgcccaggttgattaaaaaattgtgcgagcatcgaatctca
caagtaatgtgtggaaaccaacactgcatagcactttccaaagatggtcagttgtttgta
tggggagagaactccagcggtcagctgggtttagggaagggagagcccagcactctgtct
cctcaaccgctcaaatctctgagcgggatccctctggctctgatcagcgctggaggagac
cacagcttcgccctgtcactctctggagccgtgttcggctgggggaagaacagcgccggg
cagctgggcctcaatgacgagcaagatcgggctgttccctgtcacatcaagttcctgcgc
tcacagaaggtggtgtacatcagctgtggagaggagcacaccgctgccttgacaaaggac
gggggtctgttcacatttggaaatggttcaagaggacagctgggccacgattccaccaga
aacgagcctcttccacgcagagtcatggagctcatgggcactgaggtgtctcagatcgct
tgtgggcggcaccacaccctggcattcgtgccctccactggtctggtttacgctttcggc
tccaacactcagggccagctgggtacaggcctcagaggaaatgctaagagcccacttcct
gtcagaaacatccagcccctgtgcattggatacacacacacaaaagccgagtgctacacc
gttggtaaaattcacagtggaggcgaccacagtttcctgttgttgtcgactacaaaggcg
ggttcatcttgtccagaggattttcgcattatgaataccaccaaaagcatcgctgtgatt
aattctgagagtctggacagctggaggatgaagctccatgacaacagcgattcaagcatc
accaatgacatcatactcctgttttcctcaactgcatgttggaacgccagctttttagac
caaagtgatgatgggcatttcaaaaccaaccccaaagtcccaggcatcgatttcaatgct
gttaggctgctttttgagacgctgatgaaaccggccttcgcaagacttttggagcaggcc
accaagagctttgagagtctcctgatcccccagctgccctgctctcctcctgacgtggaa
gccatgcggatctacctgatcctgtctgaatgtcccgctctccacgactccaaaaactac
atctctctcaccatccctctagccatggccatcctcagactggacgccaaccccagcaaa
gtcctcgataactggtggtctctgatggattgcgaggtcttctccagactcgtggagatg
tacaaaagcattgtggtgtttctgttgactggcgggaaggcgctcctgatgcctgtgttt
ctggagagctacaccagtgctgccctgcgactgctggagaaacttcacaaggtcaatctg
aaagcccaacgcgtggaatacaaccacttctacatccctgatatctccaggctggtggac
atccaagaagactacctcaaatggtttctacgcaaagctgatattaaaatgcgatgccct
ccagtgcagggttctgtcacgttatgtgcctatccgttcatattgaacgcgcaagccaag
acaaccgtgctgcaaacagatgccgagctgcaaatgcagatggcagtaagcggcgctaac
ttgcacaacgtcttcatgctgttgactatggaacctttgctggcaagaaaccctttcctg
gtgctccacgtacgaaggaacctcttagtcagcgatgctctccgggaactcacagtctac
agtgacgtagacttgaagaagccacttaaggtgatctttgatggagaggaagctgtggat
gctggaggagtcactaaggagttcttcctgctcctgctgaaggagctgatggatcccatc
tatggcatgttcacccaatattctgagtccaatctgctgtggttctccgacaaatgtttt
gtggagcacaattggttccacttgattgggatcatttgtggcttggccatctataactcc
actgtggtggacttgcactttcccctggtgctctacaagaagcttctgaacgtttcgcct
acactggatgacctgaaagagctttcgcctacagagggaaggagtcttcagcagctgttg
gagtatgagggcgatgtggaggagaccttctgtctgaactttgcaattacgagagagtat
tatgggatcacagaagttaaagagctggtacaaggagggaagaccatcgccgtagacaag
acgaacaggaaggagtttgttcatgcgtatctgcagtatgtgttcagcgactctgtgcag
gagcagtatttggccttctccagcggtttcctgaaggtctgtggtggggagatcctctct
ctcttccagccctctgagctcatggccatggtggtgggcaacagcaactacaactgggag
gagatggagaagaatgcatcctacaagggcgagttctctgcatcccacccaacagttaag
atgttttgggaggtgtttcatgaatttcccttggagaaaaagaaacagtttttattattt
ttgacaggcagtgaccgtatccccatccacggcatggccagtctacgcatcgtcatccag
tcgactgctgcggaagagcactaccttcctgtggcccacacctgctataacctgttggac
atgccctgctaccagaccaaagagaccctgcggcaccggctcacgcaagccgtggagcag
tacgagggcttcagtctggtctga
DBGET
integrated database retrieval system
