Carassius auratus (goldfish): 113045579
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Entry
113045579 CDS
T07313
Name
(RefSeq) tiggy-winkle hedgehog protein
KO
K11988
sonic hedgehog
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
113045579
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
caua01002
]
113045579
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113045579
Peptidases and inhibitors [BR:
caua01002
]
Cysteine peptidases
Family C46: hedgehog family
113045579
Glycosaminoglycan binding proteins [BR:
caua00536
]
Heparan sulfate / Heparin
Morphogens
113045579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Ribosomal_S6e
Hom_end_hint
DUF7467
PT-HINT
Motif
Other DBs
NCBI-GeneID:
113045579
NCBI-ProteinID:
XP_026061796
Ensembl:
ENSCARG00000020413
UniProt:
A0A6P6JPK1
LinkDB
All DBs
Position
27:complement(14098050..14102441)
Genome browser
AA seq
416 aa
AA seq
DB search
MDVRLHLKQIAFLCFISLLLTPCGLACGPGRGYGKRRHPKKLTPLSYKQFIPNVAEKTLG
ASGKYEGKITRNSERFKELIPNYNPDIIFKDEENTNADRLMTKRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVHYES
KAHIHCSVKAENSVAAKSGGCFPGSGTVTLADGRRKHIKDLKAGDRVLAADDEGNVFLSD
FIMFMDHDPTTRRQFIVIETSEPFTKLTLTAAHLVFVGNASASFGTTATFASNVKPGDTV
LVSEGTGKSLKSVTVKRIYTEEHEGSYAPVTEHGTIIVDRVLASCYAVIESHKWAHWAFA
PVRLSHKLMTWLFPARDSNVTFQEDGIHWYSEMLFHIGSWLLDRDSFHPLGISHLS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaagactgcatctgaagcaaattgcttttctgtgttttatcagcctgcttctg
acgccttgtggattagcctgtggtcccggtagaggttatggaaaacgaagacatccaaag
aaattaacccctttgtcttacaagcaattcattcccaacgttgccgagaaaacgctcggg
gcaagcggcaaatacgaaggcaaaatcacaaggaattcagagcgatttaaagagctgatt
cctaattataatcccgatatcatctttaaagacgaggaaaacacaaacgctgacagactg
atgaccaagaggtgtaaggacaagttaaattcgttggcgatatccgtcatgaaccagtgg
ccaggtgtgaaactgcgcgtcactgaaggctgggatgaggatggtcaccatttcgaagaa
tctttgcactacgagggacgggcggtggacataactacctcggacagggataaaagcaag
tatgggatgctatctaggcttgcagtggaggcaggattcgactgggtccattacgaatcc
aaagcccatatacactgctctgtcaaagcagaaaattcagtcgctgctaaatcgggggga
tgctttcctggatctggtacggtgacactcgcagacgggaggaggaaacacatcaaagat
ctaaaagcgggcgaccgggttttagctgcggacgatgagggaaatgtcttcttgagcgac
ttcatcatgttcatggaccacgatccgacaacgagaaggcaattcatcgtcatcgagacg
tcagagccttttacgaagctcaccctcacagccgcgcacctcgtcttcgttggaaacgcc
tcggctagttttgggaccacagcaacgtttgccagcaacgtgaagcctggagatacagtt
ctggtgtcggaaggaacaggcaagagcctcaagagcgttacagtgaagaggatttacact
gaagagcacgagggctcttacgcgccagtcaccgagcacggaaccataatagtggatcgg
gtgctggcttcgtgttacgcggtcattgagagtcacaagtgggcgcactgggcttttgca
ccggtcaggttaagtcacaagctgatgacgtggcttttcccggctcgtgattcaaacgtc
acttttcaggaggacggcatccactggtactcagagatgctgtttcacatcggctcgtgg
ctgctggacagagactctttccatccactcgggatttcacacttgagttga
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