Carassius auratus (goldfish): 113045757
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Entry
113045757 CDS
T07313
Symbol
wdr33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113045757 (wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113045757 (wdr33)
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113045757 (wdr33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_Vps41
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_DCAF4
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
113045757
NCBI-ProteinID:
XP_026062178
Ensembl:
ENSCARG00000025722
UniProt:
A0A6P6JRF0
LinkDB
All DBs
Position
27:complement(18827886..18864324)
Genome browser
AA seq
1134 aa
AA seq
DB search
MATDIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRYLENRLWQRDHRDFRAIQPDAGCYNDLVPPVGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
AGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDIETNSVAAIPGMGIPEQLKAAMEQEQTGKEMVAEPEMSIPGLDWGMEE
VMLKDQKKPPTKKVPYAKPIPAQFQQAWAENKVPALPPGEVPKERKDEKTVDCKKKTQAE
IEQEMAALQYTNPMLLEQLKIERMAQLQEQGMPPPAGQSGPMPPFPGQGCPMPPTTQGFP
QSMPQQQMPHNMPPMGPGGMPGPFIPPGQMGPPGPPMHQGPPPQGMMGPDMHGPPRHPGA
HRNMGPQGPPGMPPGPRGMQGPPPTVMPPGPGGPPAGMMGPPPRGQGPPQGGMMHQDMRG
PVPHGNMMGPQGPMPGSMMGPPSRSHGNMQGMGSMHGMGPPPGGMHGPPNNMQGPAGNMQ
GPPPYMQGKPPHMGEGNRGQFNQGQNPGPQSMMHGIGQQGPNGKGDGPRGLPNHQMGPPP
ERQGPCQSSDGGQYWGDDGGYQEGWRRGPGGPGQEYSVGHRGISGGPWEGQERFSSHDGE
YMEHDRYDGYEDSGEEFDQRQRRSSHGDDSYRRGGPSGRGGMGGFQDEYGGDESFDSQDD
ISQGWGGRGRPRGGPPRGGGVGRKGLLPTPDDYPCHYEGGRNQEGWEGGRDSGHESYRDG
QRPDHNMHDSPSPASRERSSSLQGMDMASLPPRKRPWHDGPGTGDMDSPGAGPDDRGAGR
LPPRDESGYGPPTRGGRGGWGRGGPPNPGGPGPNLGPNIRRGAPRGVIRGGRGR
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagatattggttcacctccccggtttttccatatgcctcggttccagcaccag
gcacctcgtcagctgttctacaagaggccagactttgcccagcagcaggctatgcagcag
ctcacttttgatggcaagcgcatgaggaaagctgtgaaccgcaagaccattgattacaat
ccatctgtcatcagatatcttgagaatcgattgtggcaacgagatcatcgagatttccgt
gctattcaaccagatgcaggctgctacaatgatcttgttcctccagttggtatgcttaat
aaccctatgaatgctgtgacaacaaagtttgtcagaacctccaccaacaaagtcaaatgc
cctgtgtttgttgtacggtggactcctgaaggcaggcgacttgtaacaggtgcatccagt
ggggagtttactttatggaatgggctcacatttaactttgagacaattcttcaggctcat
gatagccctgtcagggcaatgacctggtctcacaatgacatgtggatgttgactgctgac
catggaggttacgtgaagtactggcagtccaacatgaacaacgtcaagatgttccaggct
cacaaggaggcgattagagaggccagtttctctcctacggataataaatttgccacttgc
tctgatgatggaactgtacgcatctgggactttctccgatgtcatgaggaaagaattcta
agaggtcatggagcagatgtgaagtgtgtagattggcatcccacaaagggcttggtagtg
tccggcagcaaagacagccagcaacctatcaaattttgggacccaaagactggacaaagt
ttggcaacactacatgcgcataaaaacacagtcatggaggtgaagtggaaccttaacggc
aactggctgttgacagcatcacgtgatcatttgtgcaaactgtttgacattcgcaacctc
aaagaggagctgcaggtttttagaggacataagaaagaagccacagctgtagcttggcac
ccagttcatgaaggcttgtttgccagtggaggctctgatggatcactgcttttttggcat
gcaggagtggagaaagaggtgggaggaatggagatggctcatgaaggaatgatctggagt
ttagcctggcatccactgggccacatcttgtgttctgggtctaatgaccataccagcaaa
ttttggacgagaaatcggccgggggataagatgcgggacagatacaatctgaacttgctg
cctggaatgtcagaagatggagtagagtatgatgacatagagacaaatagtgttgcagcc
attcctggcatggggatcccggaacaactgaaggctgccatggaacaagaacaaactggc
aaagagatggtggcagagcctgagatgagcattccggggctggactggggaatggaagag
gtcatgctgaaggaccaaaaaaagcctccgactaaaaaggttccttatgcaaagccaatt
ccagctcagtttcaacaggcctgggcagagaataaggttccagcgttgcctcctggagag
gttccaaaggaaaggaaggatgagaagacagtagattgcaaaaagaagacccaagcagag
attgagcaggaaatggctgcccttcagtatacaaatccaatgttgctcgagcaactgaag
attgagcgaatggcacagttacaagagcagggaatgcctccccctgctggacagtcaggg
ccaatgccaccctttccagggcagggttgtccgatgccccctacaacacaagggttccct
cagtctatgcctcaacaacaaatgccacacaacatgcctccaatgggacccggtgggatg
cctggtcctttcatacctccaggccagatgggtccaccaggacctcccatgcaccagggt
ccccctcctcagggcatgatgggtccagatatgcatggacctccacgtcatccaggcgct
cataggaacatgggtccccagggtcctcctggcatgccacctggccccagaggcatgcaa
ggacctcccccaacagtaatgcccccaggtcctggtggacctccagcaggtatgatggga
ccaccaccacgtggacaagggccaccacagggaggtatgatgcatcaggacatgaggggg
cctgtgcctcatggaaacatgatgggccctcagggacccatgccagggagtatgatggga
cctccatccaggtcgcatggtaatatgcagggtatgggaagtatgcatggaatggggcct
cctccagggggtatgcatgggccaccaaacaatatgcaagggccagcgggaaacatgcag
ggccctccaccatatatgcaaggcaaaccaccacacatgggtgaaggaaaccgtggacag
ttcaaccagggacagaatcctgggcctcagtcaatgatgcatggaataggacagcagggt
cctaatggaaaaggagatggtcctcgaggactacctaaccaccaaatgggacccccaccg
gagcgacaaggcccttgtcagagctcagatggaggccagtactggggtgatgatggaggt
tatcaagagggatggagaagaggccctggaggtcctgggcaggaatactctgtaggtcac
agaggaatctctggaggcccatgggagggccaggaaaggttttcctcgcatgatggagag
tatatggaacatgaccgatatgatgggtatgaggactctggtgaggagtttgaccagagg
cagagacggtcatcacatggagatgactcataccggaggggtggcccaagtggtcgtggt
ggtatgggtggcttccaagatgagtatggtggagatgaaagctttgattctcaagacgac
attagccaaggttggggaggaagaggaagaccgcgtggtgggccaccaagaggaggtggt
gtaggaagaaaggggcttctcccaactcctgatgattatccctgtcactatgaaggagga
agaaaccaggagggctgggagggagggcgagattcaggtcatgagagttatcgggatggt
cagcggccagaccacaatatgcatgacagtccttctccagccagtagagagcgttcctcc
tctctacagggcatggatatggcctcgctgccaccacgcaaacggccatggcatgacgga
ccaggcactggtgacatggactcccctggtgcagggcctgatgacagaggagcaggtcga
ctaccaccaagagacgaaagtgggtatgggcctccaacacggggaggaagaggtggttgg
ggccgtggtgggccgcccaacccaggtggtcctggtcctaatctgggtccaaatattagg
cgaggggctccacgtggtgttataaggggaggtcgcggacggtag
DBGET
integrated database retrieval system
