Carassius auratus (goldfish): 113045920
Help
Entry
113045920 CDS
T07313
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03015
mRNA surveillance pathway
caua04261
Adrenergic signaling in cardiomyocytes
caua04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113045920
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
113045920
09158 Development and regeneration
04382 Cornified envelope formation
113045920
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113045920
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113045920
03036 Chromosome and associated proteins [BR:
caua03036
]
113045920
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
113045920
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
113045920
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
113045920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_5
DUF6407
EF-hand_6
EF-hand_1
EF-hand_8
DUF4116
Motif
Other DBs
NCBI-GeneID:
113045920
NCBI-ProteinID:
XP_026062464
Ensembl:
ENSCARG00000012019
UniProt:
A0A6P6JSA1
LinkDB
All DBs
Position
27:22162450..22241313
Genome browser
AA seq
1189 aa
AA seq
DB search
MAATYRIVVSSINCYNSVVIDRRVQHTVHYCNGPCGAIKHGLNCTVAHRSTCAELLDTPI
SRTCSDRPISLHESKTMEHGAFCDDYHQVVPKVKKGSAIQTSASLKDITGEAINLASGKI
KEFSFEKIKYSTSHVTFRKGRKVRPDSFSRRSTDLDIIYGQFAGNDENCPPFGLFQKSVL
EEHKLSRSASLEQNLNNVATLYLNSLTEENLITRILEKTKADSSASGEDIKACLDILLKC
SEDLKKCTDIIKQCIKRKSMGGSSDDAGNPEVIYKNVMARLSNYLKRLPLELEQGQSVRQ
EHSELAELVNSIHGLQQIPFSPIFGNEQPPRYEDVVQSPPPTKPRMKPSHPEPPEGSRDL
ASSLKPIQSPSGLPARTAPSTNGFPHGSLPSTSSSGSASYICHHTVSASRPDTFSSTNSL
LSNSSENLCKDAMEALYIEEEDLDLGRMPDRAVKGDGKHSCSISESRPFSKRPTGYSEPN
SVVSDKLHELSRNGTVFKPKNDSVVNQMYLPKSTDSRLFPRSTSHVNKGGSDDIDKLLMD
LECLSQNMQKEPPLPPKLKNCAQQTGSPQHLIGNSVANDLPVAGLSGPSMTKPSKTGVEA
TEEDDGALLLRILESIESFAQELVESGAGRGTQSKEREVMRLLQDTLASTKAEVAPLPLP
VPQPETASTPAQTPKCTPAPTPSSAHPAVQTPASTVRDTSSTLLIQQTPEVIRIQPEKKP
GTPPPALAPAPSSPTPRPPSPPPAKVVATPPPSSINIPRFYFPKGLPNCAANYDEAIAKI
EAAFTEFEEEKADIYELGKIAKACGCPLYWKAPMFICAGGERTGFVSVHSFIATWRKLLH
SCYDDASKFVYLLAKPGCSYLEQEDFIPLLQDIVDTHPGLTFLKDAPEFHSRYITTVIQR
IFYTVNRSWTGKINMTELRRSNFLQTLALLEEEDDINQITDYFSYEHFYVIYCKFWELDT
DHDLFIDPKDLARYNDHASSSRIIERLFSGAVTRGNSVQREGRMSYAEFVWFLISEEDKK
NPTSIEYWFRCMDMDGDGVLSMFELEFFYEEQCERMEGMGIEPLPFQDLLCQMLDLVKPE
CPGKITLRDLKRCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDLESDGPEPSDWDKYAAE
EYEILVAEETANEQLREGSFDDDYESDELTVSSDIGNKMDKLVISDLSA
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggcggctacctatcgcattgtggtcagcagtattaactgttataacagcgttgtgatt
gaccgtcgtgtccagcacactgtacactactgtaatgggccctgtggtgcaataaaacat
ggactgaactgcacagtggctcaccgcagcacttgtgctgaacttcttgacacccccata
tctagaacttgctctgaccggcccatcagccttcatgagtccaaaacgatggagcatggt
gctttctgtgatgactaccaccaggtcgttcccaaagttaagaaaggatctgccattcaa
acctcagcaagcctcaaggatattacaggggaagctatcaacctggccagtggcaaaatc
aaggagttttcatttgagaaaatcaaatactctaccagccatgtgactttcagaaagggc
cgtaaggttcggccggactccttcagcaggaggtccactgatctagacatcatctatggc
cagtttgcaggcaatgatgagaactgtcctccattcggcctgtttcagaaatctgtactc
gaagagcataagctaagtcgcagtgcatccctagagcagaacttaaacaatgtggccaca
ctatacctgaacagcctcacagaggagaaccttattacccgcatactggagaagaccaag
gcagacagcagtgcctcgggagaagacataaaagcctgtctggacattctcctcaagtgc
tcagaagatctgaagaagtgcacggacatcatcaaacagtgcatcaaaaggaagtcgatg
ggtggaagcagcgacgatgctgggaaccctgaagtcatttataaaaatgtgatggctcgt
ttatccaactacctaaagaggcttcctcttgagctggaacaggggcaaagtgtgaggcag
gagcacagtgagcttgccgaattagtcaacagcatacatgggctgcaacaaatccctttc
tcccccatctttggaaatgagcagcctccacgctatgaggatgttgttcaatctcctccg
cccacaaagcctcgaatgaaaccctcccatccagaacctcctgaaggctctagggatctt
gcaagcagtttgaaacccattcagagcccctcgggtttgccagcacgtacagctccatca
actaatgggttcccacatggcagcttgccttcgacctccagtagtggttcagcatcttat
atctgccaccacacagtctcagccagccgaccggacacattttcttcaacaaactctctc
ttgtctaacagtagtgaaaacctctgtaaggatgccatggaagctctgtatattgaggag
gaggatttggatttgggaaggatgccggacagggcagttaaaggggatgggaagcacagt
tgtagtatttcagagtccagaccattctccaaaagacccactggctactccgagcctaat
agtgttgtttcagataaactccatgaacttagtagaaatggaactgtgttcaagcctaaa
aacgactcagtggtcaaccagatgtacttgccaaaaagcacagattccagactgtttcct
agatcaacctcacacgttaataaagggggatccgatgacattgataaattgctgatggac
ctggagtgtctttcccagaacatgcaaaaagagcccccactgccccctaaacttaaaaac
tgtgcccagcagacaggttccccccaacatttgattggtaactcggtggctaacgatcta
ccagtggcgggtttgtctggaccctcgatgactaagccctctaaaacaggggttgaggcc
accgaagaagatgatggagctctgcttctcaggattcttgagagcattgagagctttgct
caggagctagtagagagtggagctggtagaggaactcagtctaaggagcgagaggtcatg
cgacttcttcaggacacgctagccagcaccaaagcagaggtggccccgctcccactgcct
gtacctcagcctgagactgcatctacaccagcacaaacacctaaatgcacacctgcccca
acaccctcaagtgcacatcctgctgtacaaacccctgcttctactgtaagggacaccagc
tcaacgcttctcattcaacagacgcccgaagtcatcaggatccagcctgagaagaaacct
ggaacacctcctccagctctagcacctgcaccctcctcgccgaccccacggccgcccagc
cctccgccagccaaagtagtggccactcccccaccctcctccataaacattccacgcttc
tacttccccaaaggccttccaaactgtgcagccaactatgacgaggccattgccaaaatc
gaggcggccttcacggagtttgaggaggagaaagctgacatttatgaattggggaagatt
gcaaaggcttgcgggtgccccctctattggaaagcaccaatgtttatttgcgctggtgga
gagaggacaggttttgtttctgtccactcattcatcgcaacatggagaaagttattacac
agctgctatgatgatgcatccaaatttgtttacttgcttgccaaaccaggctgcagttac
ctagaacaagaagatttcatccctctgttacaggacatcgtggacactcatccagggctg
acatttttaaaagatgctcctgaattccattcccggtacatcacaacagtgattcaaaga
atattttacacagttaatcgctcttggacaggcaaaatcaacatgacagagctcaggaga
agcaacttcctccagactctcgcgctgctggaagaagaggatgacatcaatcaaatcaca
gattatttctcttatgagcacttttatgtcatttactgtaagttctgggagctggacact
gaccatgacctcttcatcgaccccaaggatctggccaggtacaatgaccatgcttcatca
agcagaatcattgagaggctgttctcaggagctgtcacaaggggaaactcagtccagaga
gaaggaagaatgagctatgctgagtttgtttggttcctcatttcagaggaggacaaaaag
aatcccacaagtatagagtactggttccgctgtatggatatggatggagatggtgttctg
tccatgtttgaactggagtttttctatgaggagcagtgcgaacgcatggaggggatgggc
attgaaccactgcctttccaggatctcctgtgccagatgctggacttagttaaaccagaa
tgcccaggtaaaatcactctacgagatctgaagcgctgcaggatggcacatattttctat
gacacattcttcaatctggagaagtacctggaccatgagcagagagatccctttgcagtg
cagaaggatttggaaagtgacggtccagagccctccgactgggacaagtatgctgccgaa
gagtatgagattcttgtggcagaggagacagccaatgaacagctacgagagggatctttt
gacgacgattacgagtcagatgagctcacggtctcctcagacattggaaataaaatggat
aagctggtcatatctgatttatcggcataa
DBGET
integrated database retrieval system
