Carassius auratus (goldfish): 113046266 Help Entry 113046266         CDS       T07313                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism caua  Carassius auratus (goldfish) Pathway caua03030   DNA replication caua03410   Base excision repair caua03420   Nucleotide excision repair caua03430   Mismatch repair Brite KEGG Orthology (KO) [BR:caua00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     113046266    03410 Base excision repair     113046266    03420 Nucleotide excision repair     113046266    03430 Mismatch repair     113046266  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:caua03032]     113046266    03400 DNA repair and recombination proteins [BR:caua03400]     113046266 Enzymes [BR:caua01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      113046266     6.5.1.6  DNA ligase (ATP or NAD+)      113046266     6.5.1.7  DNA ligase (ATP, ADP or GTP)      113046266 DNA replication proteins [BR:caua03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     113046266  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      113046266 DNA repair and recombination proteins [BR:caua03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      113046266    NER (nucleotide excision repair)     Other NER factors      113046266    MMR (mismatch excision repair)     Other MMR factors      113046266 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  113046266 NCBI-ProteinID:  XP_026062987 Ensembl:  ENSCARG00000007764 UniProt:  A0A6P6JV17 LinkDB All DBs Position 27:complement(9543931..9559782) Genome browser AA seq 919 aa AA seqDB search MKTMKYVDGLCTGADPSVGDGPGAFWTLWDVLKTSSQQSNLFLLELLDDPVILSANESKE KSDGQVKTKTEPLKSPLKIQNGVQESDSPVKKVHKRSRAIIDSDDEDQPIVKEQLPKQSE AEPAKPEQAVSTPVSPKTPITPTTPLTSSTSVAVVTPASSGTPGTPTSTSPSGIPKRKTA RKQFPKRKLESRSDGEGAKEEEKEVNEGQESKRARVEASPEQTDNGMMEVEEKREDGKTA VEEQKEKDEAKTTVVEDNANNNIKGKEKKKVKQEKKINGENGKKEKKEDKKEKEHSSPER VVKKEKSTEEEGGSAKKKPISSFFAPRKAAVKLEKEERNEGEKKKDGEISDAAEQKEKKS EKGVDSAVQSQYDPSRAHYHPIDHACWMKGQKVPYLAVARTFEKIEEDSGRLKNIETLSN FLRSVILLSPDDLLCCVYLCLNQLGPAYQGLELGIGETILMKAVAQATGRQLDKIKAEAQ EKGDLGLVAESSRSNQRMMFAPANLTAGGVFNKLKEIANMSGNSAMNKKIDIIKGLFVAC RFSEARYIVRSLAGKLRIGLAEQSILTALSQAVCLSPPGQEFPPAVLDAGKGMSAENRRV WLEEKALILKQTYCEMPNYDAIIPVLMKEGIDELPNHCKLTPGVPLRPMLAHPTKGVGEV MKRFDEASFTCEYKYDGERAQIHILENGEVRIFSRNQEDNTSKYPDIISRIPQVKKENVR SCVLDSEAVAWDREKKQIQPFQVLTTRKRKDVDASEIKVQVCVYAFDLLYLNGESLVREP LSKRRALLRESFEEKEGEFVFARSLDADNTESIAEFLEQSVRDSCEGLMVKTLEKHATYE IAKRSHNWLKLKKDYLEGVGDTVDLCVIGAYLGKGKRAGSYGGFLLACYDEENEEFQSVC KIGTGFKDEDLEQHYNFLK NT seq 2760 nt NT seq  +upstreamnt  +downstreamnt atgaagactatgaagtacgttgacgggctctgcactggtgctgacccctcagtaggagat ggtcctggtgctttctggacactctgggacgtcctgaagacttcttcacagcagtcaaac ctctttcttcttgaacttcttgatgatccggtcattctttcagccaatgaaagtaaggag aagagtgatggacaggtcaaaacaaagactgaacccttaaaaagtcccctcaaaattcag aatggtgtgcaggaaagtgattcaccagtaaagaaggtgcataaacgcagtcgcgcaatc atagacagcgatgatgaagatcagccgatagtaaaagagcagctgccaaaacagagtgaa gctgaaccagcaaagccagagcaggctgtttccactccggtttctccaaaaactcccata accccaacgactccgctcacgtcgagtacctctgttgcggtggttacccctgcttcctcc ggtactcctggaactccgacatcaacatcgccgtccggcattcccaaacgcaagaccgcc cgcaagcagttccccaagaggaagctggaaagcagaagtgatggagaaggggcaaaagag gaggaaaaggaggtcaatgaagggcaggagagtaagagagcacgagttgaggcctcacct gaacagacagacaacgggatgatggaggtggaagagaagagagaagatgggaagactgca gtggaggaacagaaagagaaggatgaagcaaaaacaaccgtagtggaggacaatgcaaac aataatataaaaggaaaggagaaaaagaaggtaaagcaggagaaaaagataaatggagag aatgggaagaaagaaaaaaaagaagacaagaaagagaaggaacacagcagtcctgaacga gtggttaaaaaagaaaaaagcacagaagaggaagggggatcggccaaaaagaaacccatc agcagcttttttgcacccagaaaggcagctgtcaaactggaaaaagaggagcgaaatgag ggagaaaaaaagaaggacggagagatctctgatgctgctgaacagaaagagaagaaaagt gaaaagggggtggattctgcagtccagagccagtatgatccctccagagctcattaccat cccattgaccatgcctgctggatgaagggccaaaaagtgccatatttggctgtcgctcgc acctttgagaagattgaagaggattcaggcaggctgaagaacattgaaacgctttccaac tttctgcgatctgtaattctgctttctccagatgacctgttatgctgtgtgtacctgtgt ctgaatcagctcggccctgcatatcagggtctggagctgggcattggggagaccatcctg atgaaagctgtggctcaggcaactgggcgacaactggacaaaatcaaggcagaggctcag gagaaaggtgacctgggattggttgctgaaagttctcgcagcaaccagagaatgatgttt gcaccggccaatctgacagcaggaggcgttttcaacaaactgaaagagattgctaacatg agtggaaattctgcaatgaataagaagattgacattattaaaggcttgtttgtggcgtgt cggttttctgaggcccgatacattgtgcggtcactggctgggaagctgcggatcggattg gctgagcagagcattctcacggctctcagtcaagctgtgtgtctgtcgcccccgggccaa gagttcccaccagctgtgctggatgctgggaaaggaatgagtgctgaaaacaggagagtg tggctggaggagaaagcactgatcctaaaacagacatactgtgagatgccaaattatgat gcaatcattcctgtattgatgaaggagggcatagatgaactgcccaatcactgcaagctc accccaggtgtgcccctgcggcccatgttggcccacccaactaaaggggttggggaggta atgaaacgtttcgatgaggcatctttcacctgcgagtataaatatgatggagagagagcc cagatccatattcttgagaatggagaggtgcgcattttcagccgaaaccaagaagacaac accagcaaataccctgatattatttcacgaatcccacaggtgaagaaagagaacgtacgg tcctgtgttctggattcagaggcggttgcctgggacagagaaaagaaacagatccagcca tttcaggtcctcaccacaaggaagagaaaggatgtggatgcatctgagatcaaggttcag gtgtgtgtgtacgcctttgatctgctgtacctcaacggagagtctctggtgcgagagcct ctgagcaaacgcagggctctgttacgggagagttttgaggagaaagaaggagagtttgtt tttgctcgatctctggacgctgacaacacagagagcattgctgagttcctggagcagtct gtacgagattcttgtgagggcctaatggtgaagacattggaaaaacatgcaacttatgag attgccaaacgctcccacaactggctcaagctgaagaaggactatcttgagggtgttgga gatacagtggatctgtgtgtgattggtgcttatctggggaaggggaagagagcaggcagc tatggaggatttctactggcctgctacgatgaggagaacgaggagttccagtctgtctgc aagattggaacaggcttcaaagatgaagatctggagcaacattacaatttcttaaagtaa

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