Carassius auratus (goldfish): 113046560
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Entry
113046560 CDS
T07313
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04514
Cell adhesion molecule (CAM) interaction
caua04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113046560
04517 IgSF CAM signaling
113046560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113046560
Cell adhesion molecules [BR:
caua04515
]
Immunoglobulin superfamily
NGL family
113046560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
LRRNT
V-set
Ig_2
LRR_EndoS
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
113046560
NCBI-ProteinID:
XP_026063165
Ensembl:
ENSCARG00000006096
UniProt:
A0A6P6JTG7
LinkDB
All DBs
Position
3
Genome browser
AA seq
729 aa
AA seq
DB search
MRITTLTSLPSPSPLLLLLVQQLLWLILPGQEAVGAASTCPTPCSCSNQASRVICTRRNL
EEVPDSISNNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDY
ISDAAFVGLINLRYLNLGMCGLKDIPNLTPLVRLEELELSGNRLEIIRPGSFQGLESLRK
LWLMHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPYLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTTTSMTSVNWITPNGTLMTHGSYRVSISVLHDGTLNFTNVTLRDTGQYTCI
VTNSAGNTTATAVLNVTAADVSVNYTYFTTVTVETVESTGEEDSVLHTFTETIHIPGPKP
SGHPWQEVVPTTASSLSILSSTSSPRATKPTFTVPISEPSYPSGLDDVMKTTKIIIGCFV
AITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEIGPGTGIRGSGISGGSTVPQ
GGSGGSGQSLRLQHSEIVNLPNLARAEHLNHYYQPHHFNNNMMGLGLGGGLNNNNNPSPC
SQAQTTPISYTQVPVSASNTSCSMPSPMPLPTLGIHGSLKGLMGKGHNPQIEPLLFKSGS
KENVQETQI
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccacgctgaccagccttcctagtccctcccccctcctcctcttattggtt
cagcagctgttgtggctcatcctcccaggtcaagaggcagtcggagccgcctccacctgt
cccactccatgcagttgttctaatcaagctagtcgagtgatctgtacaagacgaaactta
gaagaggtgcccgacagtatatcaaacaacacacgatacctcaacttacaggagaactca
atacaggtgataaaatcagacacgttcaaacatttgcggcacctggagatcctccagctc
tccaagaaccagattcgtcagatagaagtgggtgcattcaatggcctcccaaacctcaac
actctggaactgtttgacaaccgcctcacgctggtgccatcgcaagcttttgagtacctc
agcaaactgcgggaactttggttgcgaaataatcccattgagactttaccaggctatgcc
tttcaccgcgtcccctcgttgcggcgtcttgacctaggcgaacttaagaaactggattat
atatctgatgcagcctttgtcggactcatcaacctgcgctacctgaacttaggtatgtgt
ggcctaaaggacatccctaacttgactcccctggtgcgactggaggaactagagttgtct
ggaaaccgtcttgaaatcatcagacccggatccttccaaggcctggaatccttgcgcaaa
ctatggctcatgcactctcagatgtcggtcattgagcgtaatgctttcgatgatctcaag
aacctagaggagcttaacctatcccacaattctctgcactctctgccccatgaccttttc
acaccattgcagaagctggaacgagtgcacctcaatcacaacccatgggtgtgcaactgc
gatgtgctttggttaagctggtggctgaaagaaaccgtgccaagcaacacaacttgttgt
gcacggtgccacgcaccaccctaccttaagggaaagtacataggagagctagaccagagt
catttcacctgctatgcccccgtcattgtggagccacccactgacctcaatgtgaccgag
ggcatggctgctgagctcaagtgtcgcaccactacctccatgacctctgtgaactggatc
acaccaaatggcaccctaatgacccatggctcctatagggtcagtatttccgttctgcat
gatggaacactgaatttcaccaatgtaactctgcgtgacactggccaatacacctgcatt
gtgaccaactcagctgggaacacaacggcaactgctgtcctgaatgtgaccgcagcagac
gtcagtgtcaactacacctacttcaccacggtcactgtagaaacggtggagtctacggga
gaagaagattcggtattgcataccttcacagagaccatccacattcctgggcctaaacct
tctgggcacccctggcaagaagttgtccctactactgcctcttctctctcaatccttagc
tcaacatcctccccccgagcaaccaaacccactttcactgtccctatttctgagcccagc
tatccctctggactagatgatgtgatgaagaccaccaagatcataatcggttgcttcgtg
gccataaccttcatggctgccgtcatgctggtggtgttctacaaactgagaaagcagcat
cagttacacaaacaccatgggccagcgcgagccattgagatcattaatgtcgaagatgag
attggaccgggaacgggcatccgtggcagcggcatctcaggaggatccacagtaccgcaa
ggagggtcaggcggaagcggacagagcttgcgtctgcaacactctgaaatcgtcaacctc
ccaaaccttgcacgagcggagcatctcaaccattactaccagccccatcacttcaacaat
aacatgatgggtctgggccttggcggaggcctaaacaataacaacaacccttcgccctgc
tcccaggcccagactacccccatctcttacacacaggtgccagtctcagcaagtaataca
tcatgctccatgccttctccaatgcctctgccgacccttggcatccacgggtcactgaaa
ggcctgatgggtaaagggcacaacccacagattgagccgttgcttttcaagagtggctct
aaggagaatgtccaagaaacccagatctga
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