Carassius auratus (goldfish): 113046624
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Entry
113046624 CDS
T07313
Symbol
rai1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113046624 (rai1)
Transcription factors [BR:
caua03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
113046624 (rai1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
113046624
NCBI-ProteinID:
XP_026063262
UniProt:
A0A6P6JVZ9
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All DBs
Position
28:7357115..7406727
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AA seq
1966 aa
AA seq
DB search
MQSFRERSGFHGNQHCYQQEPQELSHLESYRHHHSQSRQGYEPHSLAAGGMSTAGAGSKD
CYGQLTYPIYTSTSGTQTKKPYRGAKTPNQHLQAGYSNHMGTGFTAQYMSEGHVQQKWDE
SPQMTQFEQDMVGRLESGVSGSSQYLEQNMLAISQSQCHLPSQSSAPTYTSPHQQGLPPN
PAPSPLMYPQGQLNFPQHSQHPSSSSYMEKCNAMPHGYKGYGIPSNAQYGRQLANHSSLK
QSGYRPPNNYSYPQTPSRTGFEQGSLQGMSGTQENLQKFQHFNQPQQNYCITDISVRSPE
QYYQTCSPSSSHSPARSVGRSPSYNSTPSPLMPNPDSFQYGQPPINPGASSSAGLQDQNM
LMPPHTHSSPSVNHQSQSYSGSMKERFSEKLLSNPSLWSLNALTSQVENISNNVQQLLLS
EALIANKKTSKRNHPKKGEDYRGQLKGMEESSCPDNQHGPSPSDAYTISRSMTAELQEGG
YSSSTEDQMDRSYYYFGQEKGQAQTQTHSRISLDTLSTCSLNSADDVSIRSGDSVRSLQS
VASEDNLNCDPRVQRVLTGEVPNSSLHCIRDKRSSISVTAPSPMKQESNSPPDIKHSEST
LKENFEESAWTERMADEEEIGQRKLSAEQECKGEVAEKQEKWLEDEKSPSLFNKINKAVL
QEGYSYETEENIYQGLQNKLDSEKENSSEMNCFSELNHKCNEGTEIKSENFKSELQTNAE
MLVKTSPSNSGTDLYLPEKEENSKSEDPIENLTCTEGPVDTIEDQPSVLSHNSTEVRDEK
KSLTTSEEVVNNRARPKDSFTEDCSTFKEMGNMLQVNTETAECFAHDTQHRSNERRSAIC
DIAPQPHTGKSGFSALNEKTTPLAQARDHHIDRSEAKVLEPDSPQLPGKSILHSAPSWAD
TPPSPKKGDEDMEPGISCPSAVTPSAKPEPMAPSAQTRMFGKKHARGRRRLMHSSVGIRR
QLSVEGDSAPPSAQNPSMPSSKSTLILDQMETAHQDISSQTPKLVTESLPSRMCTRSHVS
QSSPKVCPQERKKPGPKPGPKPGVKPSPKPGPKPGPKLNLKPGPKPSPKSSSKPGLKPGL
KPDVMPCIKPGPKPSLKCIGPTENTKPGTKSALKPGTKPGPKSVSKLGSNPAALAREILV
PKPSKNTAESKTIEGSVPKGPGRPRGITSKIKSINRDENVQITKDHTKDTHCTHELILQD
VTTAFTLDTLVGVVDPTKDETVGSTLESTLDSSCVKSLARNQKSMVLRSRKQTKEKLTEI
KEQENDKSSEKPSAMFIHSQIQDATVDQSCKTESSNLELPSQKDVSTDSLQQPNEEVVCL
KTKSSLLSSEIIKRKKGVQESEVKTQEPSSDTVTGACNAKGKRKRGQHLQPESESTTVTT
DNPPTDEISDMPSVPPQCPTKTKYLPPRKGRGLKYEAMVQKITSPGSKKQPVNIQPDTVP
EESTLKPVPQVSEQTEMMNIPEVTHNVGENTISTQETQNTGIQTPRKKRRKWATVESSDA
PDVALEAGSLVINTPRLAKQRAIKNNHEMHLKQRKRRRKGIEPPESIPIVEQQDPVQTDI
FSPPTLTISLPESSEQIQYEEPPTELYLPQIKPKRGRRPSLKIKQEELSSQTEDDKVKEK
KKPGPKKKVMNVLKVVVKRPNIKKKCSNDLCPTVKGTLSDLYSAMSNNKCSFRPYVHIDS
SLEPASLCTIINRPEEEQMLSQARKKCAAKMKNLVTVTKAVSNSSVMLQGPLVNKSLIDR
CLTCCLCGKPANYRELGDLCGPYYPEDCIPRKMLSSTHRNDFRQNTNCANETEVSCITEQ
INSQSACEKDADQERASQGHSGHPRRGKRAIREQIRTHPTLRMRFKRQLLLQRRLSGTSP
SAGEEGSATALHRLQTEAEAKEHWAHEACAVWTTGIILVGGKLFGLMEAVQKAAHAKCPR
CQGEGASICCSWKSCTQRYHYVCAKEMGCTFQEETFSIRCPKHKSM
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttcagagagcggagtggtttccatggcaaccagcactgctaccagcaggaa
cctcaagaattatcacaccttgagagttatagacatcatcacagccagtccagacaaggc
tacgagccacactctctagctgctggagggatgtcaacagcaggagcgggttctaaagac
tgttatggacagctgacctatcccatctataccagcacgagtggtactcaaactaaaaaa
ccttatagaggagccaaaactccaaaccagcatctgcaggctggctacagcaatcacatg
ggcactggattcacagcccagtacatgagtgaaggtcacgtgcagcaaaaatgggatgag
tcacctcagatgacccagtttgagcaggacatggtgggacggctggagtctggggtcagt
gggtcatcccagtacctagagcagaacatgctagctatctctcaaagtcagtgccatcta
ccttcgcagtcctctgccccaacctatacaagtcctcatcaacagggcctcccacccaat
cctgcaccttctcctttaatgtatccacagggtcagctcaatttcccccagcactcgcaa
cacccatcttcatcatcatatatggagaaatgtaatgcaatgccacatggctacaaaggc
tatgggataccatctaatgcccagtatggaagacaactcgccaatcacagcagtctaaag
cagagtggatacagacctccgaataattacagttatcctcaaactccatcaaggactgga
tttgaacagggttccctgcaaggaatgtctggtacacaagagaaccttcagaaattccag
cacttcaatcagccccagcaaaactactgcataacagatatatctgtaaggtcaccagaa
caatactatcagacctgcagtccaagttctagtcattcacctgcaaggtctgttggaaga
tctccatcgtacaattccacaccttcccccttaatgccaaaccctgattcatttcagtat
ggccaacctccgatcaaccccggggcttcgtcatctgcaggtctgcaagaccaaaatatg
ctaatgcctcctcatactcattcatcacccagtgtgaaccaccaatcccagagctattct
ggctccatgaaagaacgattttcagaaaagctcttgtccaaccccagtttgtggagcctt
aatgccctgacatctcaggttgaaaacatctccaacaatgtccagcagcttctgctgtcc
gaggcccttattgctaacaaaaagaccagcaagcgaaatcatccaaaaaagggagaagac
tatagaggtcagttaaagggtatggaagagtcatcttgtcctgataaccaacatggtcct
tctccatccgatgcttacaccatttccaggtccatgacagcagaactgcaggagggagga
tactctagcagcactgaggaccagatggacaggagctactactattttggtcaggaaaaa
ggtcaagcacaaacccagacacactcacgtatcagccttgacacactgtctacatgctcc
ttaaactcagctgacgatgtatccattaggtcaggtgactcagttcgaagtctccagagt
gtagcgtctgaggataatctcaactgtgacccaagagttcagagagtactgactggagaa
gtgcccaacagctctctccattgcattagagataagaggtcttctatcagtgtaacagct
ccaagtcctatgaaacaagagagcaattcaccaccagacataaagcattcagagagcact
ctaaaggagaactttgaggagtcagcatggactgagaggatggctgatgaggaggaaatt
ggacaaagaaagctgtctgcagaacaagagtgcaaaggagaggttgcggaaaagcaagag
aagtggctggaggatgagaaaagtccttctctttttaataaaattaacaaagcagtatta
caggaaggttactcttatgaaacagaagaaaatatctaccaagggctgcaaaacaaactt
gactcagaaaaagaaaactcatcagagatgaactgtttttctgaacttaaccacaaatgt
aatgaaggaacagaaataaaatcagaaaatttcaaatcagaactacagaccaatgctgaa
atgcttgtgaaaacatcacccagcaattcaggcactgatctgtatttgccggagaaagag
gaaaattcaaagagtgaggatcccatagagaacctcacatgcactgaaggaccagtggac
accattgaggaccagccgtctgtcctctcccataattccactgaggtgagagatgaaaaa
aagagtctgacaacttcagaagaggtcgttaataatagagcaagaccaaaagattccttt
acagaagactgcagtacatttaaggaaatgggaaacatgctacaagtcaacacagaaact
gcagaatgctttgcccatgacacacaacacagaagcaatgaaaggaggtcagccatatgt
gacattgcacctcagcctcacactggcaagagtggcttctcagctctcaatgagaaaaca
acacctttggctcaggctagagatcatcacatcgatcgtagtgaagcaaaggtactggag
cctgactctcctcagttgccgggcaagtcaatactgcactcagcaccatcttgggctgac
accccaccgtctcccaaaaaaggggatgaggatatggaaccagggataagctgtcccagt
gcagtgactccctcagccaaaccagagcctatggccccatctgcacaaacaagaatgttc
ggtaagaaacatgcacggggcaggagaagactaatgcattcaagtgtgggaatcagaagg
cagcttagtgtagaaggagacagtgctccaccttctgcccaaaatcccagtatgccctcc
agcaaaagtacccttattcttgaccagatggaaactgcccaccaggatattagcagtcaa
acaccaaaacttgtgacagagagtttaccatcacggatgtgcactcgctcccacgtttca
caaagtagcccaaaagtctgccctcaagagagaaagaaaccaggtccaaagcctggtcca
aaaccaggtgtgaagccaagtccaaaaccaggtccaaagcctggtccaaaattaaatcta
aaacctggaccaaagcctagtccaaaatcaagttcaaaacctggtctaaaaccaggactt
aaacctgacgttatgccctgtataaaacctggtcccaaaccaagtttaaaatgcatagga
cccacagaaaacacaaaacctggtacaaaatctgctttaaagccaggtactaaacctggt
cctaaatctgtttctaaactaggctcaaaccctgcagctttagcaagagaaatacttgtt
ccaaagccaagtaaaaacactgcagagtcaaagacaattgagggctcagtacctaaagga
ccaggccgaccaagaggaatcacttctaagatcaaatcaataaatcgagatgaaaatgtt
cagattacaaaagaccataccaaggacacacactgtacacatgaacttattttgcaagat
gtgaccacagcattcactttggacacacttgtgggtgttgtggaccccactaaggatgaa
actgtgggttccactttggaatctactctagacagtagttgtgtgaagtccttagcaaga
aatcaaaagtccatggtgctgagatcacggaaacaaacaaaagaaaagctgactgaaatt
aaagagcaagagaatgataaatcatctgagaaaccttcagcaatgttcatacactcacaa
atacaggatgctactgtggatcagtcatgtaagactgaatcttcaaatcttgaattacct
tcgcagaaggatgtttccacagattcacttcaacaaccaaatgaagaggtggtttgcctc
aaaacaaaatccagtttactgtcttcagaaatcataaagagaaagaaaggtgtgcaagaa
agtgaagtgaagacacaggagccttcatcagatacagtcacaggagcatgtaatgcaaag
ggaaagcgaaagagaggacaacacttgcaaccagaatctgaaagcaccactgtgaccact
gataaccctcccactgatgaaatcagtgacatgccttctgtacctcctcagtgtcccact
aaaaccaaatatttgcctcctcggaaaggcaggggacttaaatatgaggcaatggttcag
aaaatcacatccccggggtccaaaaagcaacctgtaaatatccaaccagatactgtacca
gaagaatcaacattaaaaccagtgccacaggtatcggagcagacagagatgatgaacatc
cctgaggtgactcacaatgtgggtgagaatacaataagtacacaagagacccaaaataca
ggaattcaaactccaaggaaaaagaggagaaagtgggcaactgtagagagcagtgatgca
ccagatgtagccctggaggctgggagcctcgttatcaacacaccaaggctagccaaacag
agagccattaaaaacaaccatgagatgcatctgaagcaacgaaagaggagaagaaaaggc
attgaaccaccagaaagcatccccattgtggagcaacaggatcctgtacagactgatatt
ttttccccacctacactcaccatctctttacctgaatcaagtgaacagatacagtatgag
gagccaccaacagaattatacttaccacaaataaaacccaaacgtggcaggcggccatca
ctcaaaatcaaacaagaggaactctcaagtcaaacagaagatgacaaagtaaaggagaaa
aaaaagcctgggccaaaaaaaaaggttatgaatgtcctcaaagttgtagtgaagaggcct
aacataaagaaaaaatgcagcaatgatctctgcccaacagtgaaagggacattatcagac
ttgtattcagcaatgagtaacaacaaatgttcctttagaccatatgtacacattgacagc
tctttggagccagcatctctttgtaccatcatcaacaggcctgaggaagagcagatgctc
agccaggcaaggaaaaagtgtgcagctaaaatgaaaaatctagtcacagttaccaaggca
gtatcaaactcctcggtaatgctccaggggcctttagttaacaaaagcctaattgacagg
tgtctaacatgctgcctatgtggaaagccagcaaattacagagagcttggggatttgtgt
ggcccctattatcctgaggactgcataccacgaaaaatgctttcgtcaacacacaggaat
gatttcaggcaaaacaccaactgtgcaaatgagacagaggtcagctgcatcacagagcaa
attaactcacagagtgcatgtgagaaggatgccgatcaggaaagggcaagtcaaggacac
agtgggcatcccaggaggggcaaaagggcaattagggaacagataagaacccatcccact
ttgcggatgagattcaaaagacagctactgttgcagagaagacttagtggaacttctccc
tctgctggtgaggagggcagtgcaacggctcttcatagattgcagacggaggctgaggcg
aaagagcactgggctcatgaagcgtgtgctgtctggaccacaggcataatactagtagga
ggcaaactctttgggctgatggaggctgttcagaaagctgcacatgcaaagtgccccagg
tgccaaggtgaaggagcttccatctgctgtagctggaagagctgtactcagaggtaccat
tatgtctgcgccaaagagatgggctgcacatttcaagaagagaccttctcaattaggtgt
ccgaaacacaagtcgatgtaa
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