KEGG   Carassius auratus (goldfish): 113046629
Entry
113046629         CDS       T07313                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    113046629
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:caua03009]
    113046629
Ribosome biogenesis [BR:caua03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    113046629
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Utp13 WDR55 EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_SCAP Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_Vps41 PEP5_VPS11_N WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_HPS5 WD_LRWD1 Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Cytochrom_D1 Pox_TAP
Other DBs
NCBI-GeneID: 113046629
NCBI-ProteinID: XP_026063271
Ensembl: ENSCARG00000006035
UniProt: A0A6P6JTS4
LinkDB
Position
28:complement(7488367..7505197)
AA seq 918 aa
MAGNTLPFKSNYAVSSKIEPFYKGGKVQISHDEQYIFCTCGPRVNILQINTGKIIHSIEQ
DDQEDITSFSLSPDDEVLVTASRALLLKQWDWKQEKCTRSWRAIHNVPVASMTFDCTSTL
LATGGCDGTIKLWDVVKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSADCGIRIWDLR
TSRCICVLESHYSAVTSLAFSPDGQTLISSGRDKICSVWDLKKAAVKRTVPVYEAVEGVV
LLPGNSDYSQMGVKGEDLHFVTAGSKGVLRVWDSSSARCVFTQTLPDAPALDTEEADLDP
RSLMHLLPMPRSNRLVTVTAEHNILIYQMPALTVQQQFVGYNDDILDVKFLGKDDTHLVV
ATNSSQLKVFELATNSCQILYGHTDTILSVDVFRKGSMFASCAKDKSLRLWKMDLKSGRV
HCVAQGSGHSNAVGSVVCSRLKKVFLVSGSQDCTMKVWDLPDPLPDVGCEPFLMTARLTE
KAHDKDVNSVSISPNDKLLASGSQDRTAKLWSLADMSLLGVFRGHSRGIWCVQFSPVDQV
LATASADGSIKIWSIQDFSCLKTFEGHDASVLKVIFVSRGTQLVSSGSDGLVKLWTIKTN
ECVKTFDAHQDKVWALHGSSKDELMVTGSADSTVTLWKDVTEVELAEEQAKQEDQVLKQQ
ELSNLLHEKKYLKALGIAISLDQPHTALRVIREIRQQEDGVQELEKTLLKLRQDQKESVL
RYSVVWNTNSRSCLDAQAVLRVLLTHLSPEEILQYQGTRTHLEGLIPYTERHMQRIGRLL
QASMFLDYMWQKMRITGGKDSGNLDDDEEMDTSPQSIFIVDKQPMDTADIWQASLQQQQD
EEEDLEDPENREELLDEDESISSSKCAHVNGVKLNGVNRVEDGGQVSSEESDDEDDVVEI
TTKSLPTDSNPSKTADIR
NT seq 2757 nt   +upstreamnt  +downstreamnt
atggctggaaacacgctgccgtttaaatcaaattatgcagtctccagcaaaatagaaccg
ttctataagggaggtaaagtgcagataagtcatgacgagcagtacatattttgcacatgt
ggtccaagagtcaacattttacagatcaacacaggaaaaattatccatagcatcgagcag
gatgatcaagaggacatcacctcgttctctctcagtcctgatgatgaggtgctggtgacc
gccagcagggctctgctcctgaagcagtgggactggaagcaggagaagtgcactcggtcg
tggagggccatccataatgtgcctgtggccagcatgaccttcgactgcacctccaccctg
ctggctacaggtggttgtgatggcaccatcaagctgtgggatgtcgtgaagcagtactgc
acacacaatctgaaaggatcctctggcgttgtacatttggttgagtttcatccagacatc
agcagactgcagctcttctcttcttctgcggactgtgggatccggatctgggacctgcgg
accagcaggtgtatctgtgttttggagagccactacagtgccgtcacatcgctggccttc
tctcctgatggccaaactctaatcagttctggccgggacaaaatctgctcggtttgggac
ctgaagaaggcggccgttaagaggactgttcccgtctatgaggctgtggaaggtgttgtt
cttctccctgggaacagcgattactctcagatgggtgtgaagggcgaagacttacacttc
gtcacggctggcagtaaaggtgttcttcgagtgtgggactccagctcggctcgctgcgtg
ttcactcagacgctgcctgatgctccggctctcgacacggaggaggccgatttagacccg
cgcagtctgatgcatcttctgcccatgccacggtccaacagactggtcactgtcaccgca
gagcacaacatcctcatctatcagatgcccgctctcactgttcagcagcagtttgtcggc
tacaatgatgatatcctggacgtgaagttcctggggaaggatgacacacatctagtggtg
gccactaacagctctcagctgaaggtgtttgagttggccactaacagctgtcagatcctg
tacggacacacagataccatcttatcagtcgatgtctttcggaaaggttccatgtttgca
agctgtgcaaaggacaagtccctgcggctgtggaagatggacctgaagagtggccgagtg
cactgcgtggcccagggcagcggtcactccaacgccgtgggctccgtcgtctgctccagg
ttaaagaaagtgttcctggtgtcgggcagtcaggactgtactatgaaggtgtgggatctg
cctgaccctcttcctgacgtgggatgtgaacccttcttgatgacggcacgactcacagag
aaagctcacgacaaggatgtgaacagcgtgtccatctctcccaatgacaagctgctggcc
tctggctctcaggaccgcacggctaaactctggtcactggcggacatgagtctgttaggt
gtcttcaggggtcatagtcgaggtatttggtgtgttcagttctctcctgtggaccaggtc
ctggccacggcttcagcggacggctccatcaaaatctggagcattcaagacttcagctgc
ctcaagacgtttgagggacatgatgcctctgtgctaaaggtcatatttgtcagtcgagga
actcaactagtgtctagtggttctgatggacttgtgaagttgtggaccataaaaacaaac
gagtgtgtgaaaacatttgacgctcaccaggacaaagtgtgggctctgcacggcagcagc
aaagacgagctgatggtgacgggatcagccgactccaccgtcacactgtggaaggacgtg
acagaagtggagctggcagaggagcaggccaaacaagaagaccaagtccttaagcagcag
gaactgtcaaatttacttcatgagaagaagtatctgaaggctctgggaatcgctatctct
ctggatcagccgcacactgcattgcgagttatccgagaaattcgtcagcaggaggatggg
gtacaggagctagagaagaccctcctgaagctccgtcaggatcagaaagagtcggtgttg
cgatactctgtggtgtggaacactaattcacgcagctgtctggacgcccaggccgtcctg
cgggtgctgctcacacacttgagcccagaggaaatcctgcagtatcagggcactcgtacc
catctcgagggcctcataccatacacagagagacacatgcagcggattggtcgtctcctg
caggcctcaatgtttctggattacatgtggcagaaaatgcgtattacaggtggtaaagac
agtgggaacttggatgatgatgaagagatggacaccagtcctcaatccatcttcatcgta
gacaagcaaccgatggacacggcagatatctggcaggcatctctgcaacaacaacaagat
gaagaggaagatctggaggatcccgaaaatagagaggagcttcttgatgaagatgagagc
atcagctcatctaagtgcgctcatgtgaacggtgtgaaactgaacggtgtgaaccgtgtg
gaagacggaggtcaagtgtccagtgaggagagtgatgacgaagatgatgttgtggaaatt
accacaaagtcccttcctacggattcaaacccctccaaaacagcagatataaggtga

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