Carassius auratus (goldfish): 113046629
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Entry
113046629 CDS
T07313
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113046629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caua03009
]
113046629
Ribosome biogenesis [BR:
caua03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113046629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp13
WDR55
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
PEP5_VPS11_N
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_HPS5
WD_LRWD1
Ge1_WD40
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Cytochrom_D1
Pox_TAP
Motif
Other DBs
NCBI-GeneID:
113046629
NCBI-ProteinID:
XP_026063271
Ensembl:
ENSCARG00000006035
UniProt:
A0A6P6JTS4
LinkDB
All DBs
Position
28:complement(7488367..7505197)
Genome browser
AA seq
918 aa
AA seq
DB search
MAGNTLPFKSNYAVSSKIEPFYKGGKVQISHDEQYIFCTCGPRVNILQINTGKIIHSIEQ
DDQEDITSFSLSPDDEVLVTASRALLLKQWDWKQEKCTRSWRAIHNVPVASMTFDCTSTL
LATGGCDGTIKLWDVVKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSADCGIRIWDLR
TSRCICVLESHYSAVTSLAFSPDGQTLISSGRDKICSVWDLKKAAVKRTVPVYEAVEGVV
LLPGNSDYSQMGVKGEDLHFVTAGSKGVLRVWDSSSARCVFTQTLPDAPALDTEEADLDP
RSLMHLLPMPRSNRLVTVTAEHNILIYQMPALTVQQQFVGYNDDILDVKFLGKDDTHLVV
ATNSSQLKVFELATNSCQILYGHTDTILSVDVFRKGSMFASCAKDKSLRLWKMDLKSGRV
HCVAQGSGHSNAVGSVVCSRLKKVFLVSGSQDCTMKVWDLPDPLPDVGCEPFLMTARLTE
KAHDKDVNSVSISPNDKLLASGSQDRTAKLWSLADMSLLGVFRGHSRGIWCVQFSPVDQV
LATASADGSIKIWSIQDFSCLKTFEGHDASVLKVIFVSRGTQLVSSGSDGLVKLWTIKTN
ECVKTFDAHQDKVWALHGSSKDELMVTGSADSTVTLWKDVTEVELAEEQAKQEDQVLKQQ
ELSNLLHEKKYLKALGIAISLDQPHTALRVIREIRQQEDGVQELEKTLLKLRQDQKESVL
RYSVVWNTNSRSCLDAQAVLRVLLTHLSPEEILQYQGTRTHLEGLIPYTERHMQRIGRLL
QASMFLDYMWQKMRITGGKDSGNLDDDEEMDTSPQSIFIVDKQPMDTADIWQASLQQQQD
EEEDLEDPENREELLDEDESISSSKCAHVNGVKLNGVNRVEDGGQVSSEESDDEDDVVEI
TTKSLPTDSNPSKTADIR
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaacacgctgccgtttaaatcaaattatgcagtctccagcaaaatagaaccg
ttctataagggaggtaaagtgcagataagtcatgacgagcagtacatattttgcacatgt
ggtccaagagtcaacattttacagatcaacacaggaaaaattatccatagcatcgagcag
gatgatcaagaggacatcacctcgttctctctcagtcctgatgatgaggtgctggtgacc
gccagcagggctctgctcctgaagcagtgggactggaagcaggagaagtgcactcggtcg
tggagggccatccataatgtgcctgtggccagcatgaccttcgactgcacctccaccctg
ctggctacaggtggttgtgatggcaccatcaagctgtgggatgtcgtgaagcagtactgc
acacacaatctgaaaggatcctctggcgttgtacatttggttgagtttcatccagacatc
agcagactgcagctcttctcttcttctgcggactgtgggatccggatctgggacctgcgg
accagcaggtgtatctgtgttttggagagccactacagtgccgtcacatcgctggccttc
tctcctgatggccaaactctaatcagttctggccgggacaaaatctgctcggtttgggac
ctgaagaaggcggccgttaagaggactgttcccgtctatgaggctgtggaaggtgttgtt
cttctccctgggaacagcgattactctcagatgggtgtgaagggcgaagacttacacttc
gtcacggctggcagtaaaggtgttcttcgagtgtgggactccagctcggctcgctgcgtg
ttcactcagacgctgcctgatgctccggctctcgacacggaggaggccgatttagacccg
cgcagtctgatgcatcttctgcccatgccacggtccaacagactggtcactgtcaccgca
gagcacaacatcctcatctatcagatgcccgctctcactgttcagcagcagtttgtcggc
tacaatgatgatatcctggacgtgaagttcctggggaaggatgacacacatctagtggtg
gccactaacagctctcagctgaaggtgtttgagttggccactaacagctgtcagatcctg
tacggacacacagataccatcttatcagtcgatgtctttcggaaaggttccatgtttgca
agctgtgcaaaggacaagtccctgcggctgtggaagatggacctgaagagtggccgagtg
cactgcgtggcccagggcagcggtcactccaacgccgtgggctccgtcgtctgctccagg
ttaaagaaagtgttcctggtgtcgggcagtcaggactgtactatgaaggtgtgggatctg
cctgaccctcttcctgacgtgggatgtgaacccttcttgatgacggcacgactcacagag
aaagctcacgacaaggatgtgaacagcgtgtccatctctcccaatgacaagctgctggcc
tctggctctcaggaccgcacggctaaactctggtcactggcggacatgagtctgttaggt
gtcttcaggggtcatagtcgaggtatttggtgtgttcagttctctcctgtggaccaggtc
ctggccacggcttcagcggacggctccatcaaaatctggagcattcaagacttcagctgc
ctcaagacgtttgagggacatgatgcctctgtgctaaaggtcatatttgtcagtcgagga
actcaactagtgtctagtggttctgatggacttgtgaagttgtggaccataaaaacaaac
gagtgtgtgaaaacatttgacgctcaccaggacaaagtgtgggctctgcacggcagcagc
aaagacgagctgatggtgacgggatcagccgactccaccgtcacactgtggaaggacgtg
acagaagtggagctggcagaggagcaggccaaacaagaagaccaagtccttaagcagcag
gaactgtcaaatttacttcatgagaagaagtatctgaaggctctgggaatcgctatctct
ctggatcagccgcacactgcattgcgagttatccgagaaattcgtcagcaggaggatggg
gtacaggagctagagaagaccctcctgaagctccgtcaggatcagaaagagtcggtgttg
cgatactctgtggtgtggaacactaattcacgcagctgtctggacgcccaggccgtcctg
cgggtgctgctcacacacttgagcccagaggaaatcctgcagtatcagggcactcgtacc
catctcgagggcctcataccatacacagagagacacatgcagcggattggtcgtctcctg
caggcctcaatgtttctggattacatgtggcagaaaatgcgtattacaggtggtaaagac
agtgggaacttggatgatgatgaagagatggacaccagtcctcaatccatcttcatcgta
gacaagcaaccgatggacacggcagatatctggcaggcatctctgcaacaacaacaagat
gaagaggaagatctggaggatcccgaaaatagagaggagcttcttgatgaagatgagagc
atcagctcatctaagtgcgctcatgtgaacggtgtgaaactgaacggtgtgaaccgtgtg
gaagacggaggtcaagtgtccagtgaggagagtgatgacgaagatgatgttgtggaaatt
accacaaagtcccttcctacggattcaaacccctccaaaacagcagatataaggtga
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