Carassius auratus (goldfish): 113046667
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Entry
113046667 CDS
T07313
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04020
Calcium signaling pathway
caua04080
Neuroactive ligand-receptor interaction
caua04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113046667
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113046667
04082 Neuroactive ligand signaling
113046667
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113046667
Ion channels [BR:
caua04040
]
Ligand-gated channels
Glutamate (ionotropic)
113046667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
113046667
NCBI-ProteinID:
XP_026063334
Ensembl:
ENSCARG00000017054
UniProt:
A0A6P6JTX7
LinkDB
All DBs
Position
28:complement(8071776..8136230)
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AA seq
1399 aa
AA seq
DB search
MGVHLGCLSDTLWLPLLLLLSVLCAPRCQCRPFGMVEPTVNVAVVFSGSAYQMEIKGRLS
RENFLDLPLEVNPITVLVNNTNPRTLLTRICDTLAANRVHGVVFEDNIGSEAVAQILDFI
STQTAVPIVGISGGSAVVLPHKGVGSSFLQLGSSVQQQIAGMFKMMEEYNWDSFVVVTSL
YPGYDTYVDYIRSYIDTSYFLWEMQDILTFDMLADGLNDLRARRLLQQIDAQVLLVYCSH
DEAQYLFTMAREVGLVGPGYIWFIPSLAVGNPNMPPPDSFPIGLISIITDRWKMSLRNRV
RDGVAIVVKGVESFRKQRGFIPDGHMDCLSPERPSTNDTLFRHMLNVSWENTDFSFNSDG
YLVNPSMIIITLDRGRQWDKVGNYESGILQMRYPVWPRYGTFLETVSDNRHLTVATLEER
PFVIVEAVDPVTGTCLSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRNIK
FSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVETG
ISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSAK
DPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAF
MIQEQYIDTVSGLSDKKFQKPQDQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKYNQKG
VEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKESRWK
RPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGLSL
LVFAWEHLLYWKLRHSVHNSERLDFLLAISRGIYSCFNGVEDIDRNGNMQSPDVTTSYTQ
ANMLKMLQTAKDIVSSARVENSLDNATKTIENWSRRDPEAARPSLPTCLIGTDFSHSRLP
CIASVMDNHSYPQNMDSTTQHLLEKPHMGTHPTSLRYTLPARTTHHHIYERTLPISSLSS
PHIAMRDPPPPTAPKPHVYVDQSCHHPTSRYVSYRDFQVPDIFVEHQEPSGSQKQYMAGL
GRKKRSHSYVAASPETGRRGDYDVPQSCLAELKSNHLVENHSHTTPCMRSQFQRPGSSCN
SCTKLYLEPEMDDVPLLGKDKMNRRASFLRATWSGDRIRQLDEKPSTSASSTSCINMPDL
FPRVVVNNPKPSKMYSSSGNNLRYNMAVEPAYLDPAHMGTYPYKPQKFKYSKSIRLPSYR
EAILKNTAALRRSSSTLVHGHYSTYLNSYTDMPVYLGPLPQGPAHFHEHSKDTCHLFPCV
NHCPENAALVPRLGSRPVFYQSTAVGGYEGARRSNEESLHTVPVSSVRRDHRQVLVARNV
HSPYAPRPWGRVSSLESEV
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcatctaggctgtctcagcgacacactgtggctgcctttgctgctgctgctg
tctgtcctctgtgccccccgctgccagtgccgcccgttcgggatggtcgagcccaccgtg
aatgtggcggtggtgttcagcggctccgcctaccagatggagatcaaggggcgactgagc
cgggagaacttcttggacctgccgctggaggtgaaccccatcactgtgctggtgaacaac
accaacccgcgcaccctactgacgcgcatctgcgacacgctggctgctaacagggtgcac
ggggtggtctttgaagataacattgggtccgaggccgtggcgcagatcctagacttcatc
tcaacgcagacggccgtgcccatagtgggcatcagcgggggatctgccgttgtcctgcct
cacaagggtgttggttcttccttccttcagctgggctcttccgtccagcagcagattgcc
gggatgttcaagatgatggaggagtacaactgggacagttttgtggtggtgaccagcctg
taccctggctatgacacctatgtggactacatccgctcctatatcgatacgtcttacttc
ctctgggagatgcaggacatcttgacatttgacatgttggccgatggcttgaacgacctc
cgtgcccgccggttacttcagcagatcgacgcgcaggtgctgctggtgtactgctcgcac
gacgaggcccagtacctcttcaccatggccagggaagtgggtttggtgggtccggggtat
atctggtttatccccagccttgcagtgggaaaccccaatatgcctcccccagacagcttc
cccattggattgatcagcattatcaccgatcgctggaagatgagcttgagaaacagggtc
agggatggtgtagccatcgtggtgaaaggagtggagagcttccgcaaacagagagggttt
attcctgacggacacatggactgtctgagtccagagcggccatccaccaatgacactctc
ttcagacatatgctgaatgtgtcctgggagaacacagacttttccttcaacagtgatgga
tatctggtcaacccttccatgatcataatcactctggaccgcgggagacagtgggataag
gtggggaattatgagtctggtatcctgcagatgaggtatcctgtgtggccacgttatggg
accttcctggagactgtgtctgataaccgtcacttgacagtggccacactggaggaaagg
ccttttgtgattgtcgaagctgtggatcctgtcactggcacctgcctcagtaacactgtc
ccctgcagacggcagtcaaacaagaccgaaacgatagtcgggcacactgagccttacacc
aaactatgctgcaaaggtttttgcatagacatcttgaaaaagctctctcgcaacatcaag
ttctcctacgacctctacctggtcaccaacggcaaacatggcaagctggtacgagggatc
tggaacggtatgattggagaggtgttttataagcgagcggacatggccattggctctctg
accataaatgaggagcgctctgagatcattgacttctctgtgccgtttgtggagacgggc
atcagtgtgatggtggccagaagcaatggaactgtatctccatcagccttcctggagccc
tacagcccagcggtgtgggtcatgatgtttgtcatgtgtcttacagtcgtggcggtgact
gtgttcgtgtttgaatacttcagtcctgtgggctacaaccgtagcctggtcagtgccaaa
gatccaggtggtccgacgttcaccattgggaagtcggtctggctgctgtgggggatcgtc
ttcaataactcagtgcccattgaaaaccccaaaggcaccaccagtaagatcatggtgctg
gtgtgggctttctttgccgtgatcttcctggccagctacacagccaacctggcagccttc
atgatccaggagcagtacattgacactgtttctggactgagtgacaagaagttccagaaa
ccacaagaccaatatcctccattccggtttgggaccgtgcccaatggcagcacagaacga
aacataaggagcaattatcctgaaatgcattcccacatggttaagtacaaccagaaaggt
gtggaggatgcgctcaacagcctcaaaactgggaagctggatgccttcatatacgatgca
gctgtgcttaactacatggctggtaaagatgaagggtgtaaattggtgacaatcggtagt
gggaaggtatttgcaacaacaggctacggtatcgcccttcagaaagaatctcgctggaag
cgccccatagacctcgctcttctccagttccttgctgatggtgacactcagaagctccag
acagtgtggctcactggtatctgtcgtaacgagaagaaggaggtgatgagctctaagctc
gacattgacaacatggccggagtgttttacatgcttctagtggccatgggtctcagtctg
ctggtctttgcctgggaacatctactatactggaagctacggcattctgtccacaactct
gagcgcttggacttcctgttggctattagcaggggaatctacagttgcttcaacggtgtg
gaggacattgaccgtaacgggaacatgcagagcccagatgtcaccaccagttacactcag
gccaatatgctgaaaatgctccaaaccgctaaggacattgtctcatctgcaagagttgaa
aactccctggacaatgccacaaagaccatcgaaaactggagtcgacgtgatccagaggca
gccagacctagccttcctacctgcctcatagggacggacttcagccatagccgcctgccc
tgcatcgccagtgtaatggacaaccactcgtaccctcaaaacatggatagcaccacacag
cacttgctagagaagcctcacatgggaacacatcctacctcactccgctacactcttccc
gcacgcaccacccaccaccacatctacgaacgaacactacccatatctagcctcagcagt
ccccatattgccatgagagacccaccacctcccacagccccgaaaccccatgtgtacgtg
gaccagtcctgtcaccaccctacctctcgctacgtctcttaccgtgactttcaggtacca
gacatctttgtggaacaccaggaaccttcgggaagccaaaaacaatacatggcaggtctg
ggtcgcaaaaagaggtcccacagctacgtagcagcatctccggaaactggccgaaggggc
gactatgatgttccccagtcttgtctggctgagctcaaaagcaaccacctagtggaaaac
cattcccataccacaccctgcatgagaagccaattccagagacctggctctagctgcaac
tcctgcacgaagctgtatctagaaccggagatggatgatgttcctcttctggggaaagat
aaaatgaaccgccgcgcctcttttctcagggctacatggagtggtgacaggatccggcag
ctggatgagaagccctccacctctgcatcctctaccagttgcatcaacatgcctgatctg
ttccctcgagtggtggtgaacaatcccaagccttcgaagatgtacagcagcagtggtaac
aacctacgctacaacatggctgtggagccagcctatctggacccagcccacatgggcacc
tacccgtacaagccacagaagtttaagtactcgaagtccatccgccttccttcataccgg
gaagccattctaaagaatacggcagcccttcgacgctcctcttccacactagtgcacgga
cactattcaacgtacctgaactcttacacagacatgccggtgtatttgggtcctcttccg
caaggacctgctcacttccatgagcattccaaagacacgtgccacctgtttccatgtgtc
aaccattgcccggaaaatgccgctttggttccccggttaggcagcagacctgtgttttac
cagagcactgctgttggaggctacgagggggccaggcgctcaaacgaagagtcgttgcac
actgtaccagtctcttccgtgcgcagggaccacaggcaggttctagtggcacggaacgta
cacagtccctatgccccacggccctggggtagggtatctagtctggagtcagaggtttga
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integrated database retrieval system
