Carassius auratus (goldfish): 113046967
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Entry
113046967 CDS
T07313
Name
(RefSeq) MHC class II transactivator-like isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
caua01001
]
113046967
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
caua04054
]
113046967
Enzymes [BR:
caua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
113046967
Protein kinases [BR:
caua01001
]
Serine/threonine kinases: Other
TAF1 family
113046967
Pattern recognition receptors [BR:
caua04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
113046967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
nSTAND_NTPase5
LRR_8
AAA_25
Pox_A32
TsaE
ABC_tran
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
113046967
NCBI-ProteinID:
XP_026063928
Ensembl:
ENSCARG00000028351
UniProt:
A0A6P6JVW1
LinkDB
All DBs
Position
28:complement(15347468..15360896)
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AA seq
1154 aa
AA seq
DB search
MSWSRGCCPVMVPFEEVLFQVRKALQVSPSLLHELLRELHEARVFSTQYYQSLYKDGDIG
EQRLCEVFLNNGEDLARRLSLPIWQNWDISQSILDLALSKEEDLVPSDAEWQDIVPDLMS
ELLPDNVILKYLESPESIEDDFDPTVLDNFPGDIGTTCTPIPEDATFLDGVPPKKPKVVH
KRRRKRGHSTANRKATVCPESPSNGSTPTIVPESSFHLSSTPFQHVLRIPFSPPLLPPNG
GSPLQIIQTIGPYTPPLFGTVVPTGSTYVIVSPQCVSPGAQILPLSPATGTVAPPELTGS
VLPVGSSSDSACQGSPTVDPHSPTKDLQKHNDSTSPKSEKKLRPAAPECVKDYKHHTQSY
MRDVCCSMRGNLGMESHYVDAHLVQRKLLIKSGKNANKCLEKELVVLSDSERKRAKLDRS
QLFHNSDSKPKQSFALLGKAGAGKTTFIQRLCLDWASGSLPQFQFVFLLNCKILDLTKST
YSLKGLLLDLSVSPRCEDSDSVFKHILSCPDEVLIIFDSFDHIKDFEGLLQSPAKSHTNT
KYTIKQLFSGLFQKEILSGCTLLIATRPKDVLNQVLRKMDSLLELCGFSPEDIELYTSKY
FGDNTSLQESALKQIKNDRYIFSLCSNPLLCWTTCFLLEHQESCSDLPSTLTDLYQRVTS
KHLQLASLENSSLCKNRKHLDIPQLCKMAWEGFKNHDTRLNPASSAEQLDCALKSGILTS
YKTPEGQENHFADLFTQNLLSAVHLVQSKQVNEKMVVANSVVHQKKRKVQGESQDVLQRF
VTGLVFQKPPDGVSILDSSVNIKAKRKAVETHLESMKPNDLVPARLLELFHCVYETGSAK
FAKLLLKNLPDNLSFYGTQLCPSDVYVICHLLQYASALKRTFSINLQDTCIPISGLKELV
GLKCIKAFWSHTADTIGLWEDLHQSNDELNLKSAIEKFTLHPFKATEGYHIESLPVLVQI
HREKKLPMSESVSALDEGVPALRHLQRLEFELGVQNGPELFPKLVEVLPSLQSLQHLDLE
KNQIGDSGAEKLAGVLHFLECLKLLNLSQNLIGDAGVEKLAKALAKVPSLQSLSLYGNAI
ADIGAEHLALALPDMNFLLDLNVAFNKFTDLGATKLGAALKNCTGMKSLELWNDCIPYGV
FEHLRLQDPRIRSL
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgagctggtctcgcggctgctgtccagtcatggttccctttgaggaggtactgtttcag
gtgagaaaagctttacaggtcagcccaagcctactgcacgagcttctccgagagctacac
gaggcccgcgtcttctctacccagtattaccagtctctctacaaggatggggacattgga
gagcagcgtttgtgtgaagtctttctcaacaatggagaagatctggccagaagactctct
ttgccaatctggcagaactgggacatcagccaaagcatcttggatttggcactctccaaa
gaggaagatttggttccttctgatgctgaatggcaagatattgtcccggacttaatgtct
gaactcttacctgataatgtcatcttaaagtatctcgagtctcctgagtctattgaagat
gattttgatcccaccgttcttgataactttccaggtgacataggcacgacctgcacgcca
ataccagaggatgctactttcctagatggagtgccacccaaaaagccaaaagttgtacac
aaacgccgcagaaaacgtggccattcaactgctaatagaaaagctacagtgtgcccagaa
agtccctcaaacggaagcacacccaccattgtccctgagagtagtttccatctaagctca
accccgttccagcatgtgcttcgtattcccttcagccctcctcttctgccccctaatgga
ggttcaccactacaaataatccagacaattggcccttatacaccccctctgttcggcact
gtggttccaacagggtctacatacgtgattgtatcgcctcagtgtgtgagtccgggcgct
cagatacttcctctttcacctgccactggcacagttgcaccgccagaactcactggttct
gtacttcctgttggctcatcctcagacagcgcatgccagggctcgccaacagtagaccca
cactcccctacaaaagacctacaaaaacacaatgattccacctctccaaaaagcgaaaag
aaactccgcccagcagcaccagaatgtgtgaaggactacaaacatcacacacaatcctac
atgagagatgtctgctgctcaatgcgtgggaacctgggaatggagtcgcactacgtggac
gcacatctggtccagagaaaactgcttatcaaatctggtaaaaatgcaaacaagtgtctg
gagaaggaactggtcgtccttagtgactcagagcgaaagagggcaaagctggacagaagc
cagttgtttcataacagtgattccaaaccgaaacagtcatttgctctcctgggaaaagcc
ggagcggggaaaaccacgttcattcagcgtttatgcttggactgggcgagcggcagcctg
cctcaatttcagtttgtttttttgttgaactgtaaaattttagacctcacaaaatcaacc
tacagcttgaaaggtttactgttggatttgtctgtgtctcctcgctgcgaggactcagac
tctgtgttcaaacacattctgtcctgccctgatgaagttctcattatcttcgacagcttt
gatcacattaaagactttgaagggcttctccagtcccctgccaaatcacacacaaacact
aaatacacaatcaaacagctattttccggtttgttccaaaaggaaatcctctcgggctgc
acgctactcatcgccacgaggcctaaagacgttttaaaccaggtgctgcgaaaaatggac
agccttttggagctttgtggcttctctcctgaggacattgagttgtacacatcaaaatat
tttggggataatacttccctccaagaaagtgcactaaaacagattaagaatgacagatac
atattcagtttatgctccaacccgctgctttgttggactacctgtttcctgctcgagcac
caagaaagctgcagtgatttgccttcaaccctcacggatttgtaccaaagagtgacctcc
aagcatctgcaactagctagccttgagaatagctcgttgtgtaaaaacagaaaacatctg
gacatcccacagttgtgcaaaatggcatgggagggcttcaagaatcatgatacacggcta
aaccctgccagttctgcggagcagctggactgcgctctaaaaagtggcatactcacgtcc
tacaaaacgcctgagggtcaggaaaaccactttgcagaccttttcactcagaacctcctg
agcgctgtgcatctggtacagtccaaacaggtgaatgagaaaatggtggtagcaaacagc
gtagtccatcagaagaagcgaaaggttcagggagagtcgcaggacgtgctgcagaggttt
gtcaccggcttggtcttccagaagccccctgatggagtcagcatcctggacagcagtgtc
aacattaaagccaaaagaaaggctgtcgaaacccatctggagagcatgaagccgaatgat
ttggttcctgccaggttactagaactgtttcattgcgtttacgagaccggcagcgccaag
tttgccaaactgctgttgaagaacctgcctgacaatctgtcattctatgggacgcagctt
tgcccatcggatgtgtatgttatatgccatctccttcaatatgccagtgcgctgaagcgg
accttctccattaacctgcaagacacatgcattcccatcagtggcctgaaagagcttgtg
ggactcaaatgtatcaaagcattctggtcacatacagcagacaccattggcttatgggag
gacttgcatcaaagcaatgatgaactgaacctgaaaagtgccattgagaaattcaccttg
cacccattcaaggcaacagaagggtatcacatagagagcctgcccgtccttgtccaaatt
cacagagagaagaagctaccaatgagtgaatctgtgtctgcactggatgaaggtgtgcca
gccctccggcatcttcagagactggaatttgagcttggagtccagaacggtcctgaactt
ttccctaaactcgtagaggtcctgccttctctgcagtctctccaacatctggaccttgag
aaaaaccaaataggagactctggagctgagaagctagctggcgttttacatttcttggaa
tgtctgaaattgctgaatctgtctcaaaacctcatcggagatgcaggagtagagaaacta
gctaaagctttggcaaaagtcccttctctacagagccttagcctttatggaaatgcaatt
gctgacattggagctgaacatctggccttggctttaccggacatgaatttcctgctggac
ctgaacgttgctttcaacaagttcacagaccttggagctacaaagcttggtgctgctctg
aaaaactgcacaggaatgaagtccctggagctgtggaatgactgcatcccatatggagtt
tttgaacacctgcgtcttcaagatccacggataagatcactttga
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integrated database retrieval system
