Carassius auratus (goldfish): 113047737
Help
Entry
113047737 CDS
T07313
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113047737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113047737
03009 Ribosome biogenesis [BR:
caua03009
]
113047737
Enzymes [BR:
caua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113047737
Spliceosome [BR:
caua03041
]
Complex A
U1 snRNP components
U1 related factors
113047737
Complex B
113047737
Ribosome biogenesis [BR:
caua03009
]
Eukaryotic type
Pre-60S particles
Helicases
113047737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
113047737
NCBI-ProteinID:
XP_026064808
Ensembl:
ENSCARG00000000338
UniProt:
Q1EG31
LinkDB
All DBs
Position
3:complement(10755589..10760959)
Genome browser
AA seq
611 aa
AA seq
DB search
MPGYSDRDRGRDRGSYNSGPPRFGGSRGGPPPGKKFGNPGERLRKKHWNLDELQKFEKNF
YQEHPEVSRRSIQDVEHYRRTKEITVKGRDCPKPIVKFHEANFPNYVMDVIGKQNWTDPT
PIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERGEGPICLVLAPTRE
LAQQVQQVAAEYGKASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTN
LRRCTYLVLDEADRMLDMGFEPQIRKILDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYV
QINVGALQLSANHNILQIVDVCNDGEKEDKLMRLLEEIMSEKENKTIIFVETKRRCDDLT
RSMRRDGWPAMGIHGDKSQQERDWVLNEFKYGKAPILIATDVASRGLDVEDIKFVINYDY
PNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHDLVSVLREANQAINPKLIQMAEDR
GGRSRGGRGGGYRDDRRDRHSGGRRDFNSYGQDNRNSDSYGQKKVFGNKTQNGSSGYNSS
NSFNAGYSNNGQGNFGSQSGGYGNQGYQSQQFAPNPAPVQNSMNHPPPFPFNPQQMPQTM
PFPMAPPTFPQ
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatattcagacagagaccgcggtcgtgacagaggtagttacaatagtggcccc
ccgcgctttggaggcagcagaggtggacctcctccgggcaagaagtttgggaatcctgga
gaacgtctgcggaagaagcactggaacctggatgagctccagaagtttgagaagaacttc
taccaggagcatcctgaagtttctcggaggtcaattcaagatgttgaacactacagaaga
accaaggagatcaccgtgaagggtcgagactgtcccaaacccattgtaaaattccatgaa
gcaaactttccaaactatgtgatggatgtgattggtaaacagaactggactgatccgact
cctatccaggctcaggggtggccagttgcactgagtggaaaagatatggttggcattgca
cagaccggctctggaaaaacactctcgtatctgcttcccgctattgttcacataaaccac
caaccattcctggagcgaggtgaaggtcccatttgcttggtgttggcacccacccgtgaa
ttggcgcagcaggtccagcaggtggcggcagagtacggcaaagcttctcgtctcaagtcc
acctgcatatacggaggcgctcccaaaggaccacagatccgggacctggaaaggggtgtc
gagatttgtatcgccacacccggaagacttattgatttccttgaagttggaaagacaaat
ctgcgcagatgcacgtatcttgtgctcgacgaagctgaccggatgcttgacatgggattt
gaacctcagattcgaaaaatcttggaccaaattagaccggaccgacagactcttatgtgg
agtgctacgtggcccaaagaggtgaggcagctggctgaggacttcctgaaggactatgta
cagatcaacgtcggtgctctgcagctcagcgccaaccacaacatcctacagattgtcgac
gtttgcaatgatggcgaaaaagaagacaaactgatgcgtctgctggaggaaatcatgagc
gagaaggagaacaagaccattatttttgtggagaccaagagaaggtgtgacgatctcacc
aggagcatgcgtagggatggatggccagcaatgggcatccatggagacaagagtcagcag
gaaagagactgggtgctcaatgagttcaaatatggcaaagcgcccatcctcattgccaca
gatgttgcctccagaggactagatgtggaggacatcaaatttgtcattaactatgactac
cccaacaattctgaggactacattcaccgcattggccgtacggctcgcagtcagaaaacc
ggcacagcctacactttctttacacccaacaacatgaaacaggctcacgacctcgtctcg
gtcctccgcgaggccaaccaagccataaaccccaagctcatccaaatggccgaagacaga
ggaggtcgttccaggggaggtcgaggtggagggtatagggatgaccgccgcgatcgccac
tctggcggcaggcgggacttcaacagctacggccaggataaccgtaacagtgactcttac
gggcaaaagaaggtatttggaaataaaactcaaaacggatctagcggttacaacagcagt
aacagctttaacgcgggttacagcaataacggacagggtaacttcggcagtcagtctggt
gggtacggaaaccaaggctatcagagccagcagtttgcaccaaacccagctcctgttcag
aacagcatgaaccaccctccaccgttccccttcaacccccagcagatgccacagaccatg
ccgttccccatggctcctcccacattccctcagtaa
DBGET
integrated database retrieval system
