Carassius auratus (goldfish): 113047780
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Entry
113047780 CDS
T07313
Name
(RefSeq) AT-rich interactive domain-containing protein 2-like isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113047780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113047780
03021 Transcription machinery [BR:
caua03021
]
113047780
03036 Chromosome and associated proteins [BR:
caua03036
]
113047780
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
ARID
113047780
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113047780
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
113047780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
113047780
NCBI-ProteinID:
XP_026064855
Ensembl:
ENSCARG00000007634
UniProt:
A0A6P6JZ39
LinkDB
All DBs
Position
29:complement(595273..614304)
Genome browser
AA seq
1607 aa
AA seq
DB search
MANSTGKNLPEPRRKGQAFLDELRQFHLSRGSPFKKVPVVCGKELDLGALYMRVVSLGGF
AKVSDKNHWAELSEDFNFPRCCSNAAFVLKQYYLRYLEKYEKVHHFGEEDEEEQPGNPKH
LLPIGAIPTSYNYQQHTVSDYLRQSYGLSTEFIPPSDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHAMQLEKEPKLVTLLLAHAGVFDDSLGSFSALFGTDWQEKTSRDFVRFWKDV
IEDNEVKDLISDKSCTPQNALEMRDVCCPLFHPTRAVGIGDIEGQRVLQVAMILRNLSFE
EANIKLLAANRTCLRFLLLCAHCTFIQLRQLGLDTLGNVAGELQLDPVDFRTTHLMFHTI
TKCLLSRDRFLKMRAMEILGNLSKVEDNGVLICEYVDQESYREVIALLTLPDIMLVISAL
EVLYQLAELGEITCSKISSVERSIDLLVRLVSVDLHTFGPDALTAVKLIEHQASSSQVSE
VRPQLLEHAPQPTQGTPGAVNRAPVQSTPPPGIVEVDGEKFTNQWLNANFEVHPDGSVSR
SEMYSEYLATCSKMARGGVLTSNNFYKCLRTLFPNHTVKRVEDTRLNGQAQIHVVGVRKR
PIPLPVQLYYQQQASPAPVLKHETPSETPQPLSALPPGVGGQLVRTPALSLTAGQAAPQV
AFTMHRTSHTNAPSAPAPAQTVPRLPMNPPGQAALPPPCPPATAPVPIRPNDILKTAMIQ
SSIPTATAAPAVPNHSVSPTQQPLLHHTPVTLIQQGPSPQGHVFTGRVQGVGPSVAQQRL
QAPQGQQGAPSQESMVLAPPQYVSAPCTSLVAGGQVMTVSGMTSNRVTFQNIAPKPAPQA
QSQQPQPPQPQQQSLVIVSQNQQHNSAFAPAIHQIVLTNPSPQTIQPQPTQSPTSPNAPI
TNPAPMQQAPPNTVSHMLSLKRQFQQTPPPPPPPAQPTSTESSLIKQLLLPKRGPSTPGG
KLILPAPQVPAPVSTRAPSPQVVYQVTNSGPVASQPQLNVQLMQSPLQATGAVPISILPG
QIISTSTSGNLLQATPSNQVTFTVVPNSGFPGQGAQTPPTIGLQLTPPLPVAGATPIPPF
RGDRIICQKEEEAKDATGLHIHERKIEVMENNSVTDGSAKASNGESAEVDGPAAKLLNGR
KFDSSLPPYHSGNSQAEALNGPVAQGGDSPGKQTPSEPKKLMVNGVCDFDRSDATHPSKN
IPNHKASKHMGNGEVLSPQKVHGLFGLKDSVAAPQQDTVKAEQVERLANGPSHGAEISNG
SNSETLSLRQQHPPHNHSSPPPVSEPPPLPPANGTSESRPLKRPLEDGDRGTSGIPTKMG
VRIVTISDPNNAGNSATMVAVPAGADPSTVAKVAIENAAQQRASVPSPLPETNAQQPMSV
ETPPPVDPAAQGTNQSSPAPALCPDQARKPGQNFRCLWQACRRWFDTPSQVFYHAATCHG
SKDAYPGQCQWEGCEPFPRQRLSFITHLQDKHCSREALLAALKLEEQTQSSNPNTSKSPP
AAVSSPPPPPRPQKALVNHPSAALMALRRGSRNLVFRDFTDDKEGPMTKHIRLTAALTLK
SIAKYSDCGRKLVRRHENHLSVLALSTMEVSTTLAKCLYELTRSLQT
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactcgacggggaaaaacctccccgagccgcggaggaaaggacaggcttttctg
gacgagctgcggcagtttcacctcagcagaggatctccgtttaaaaaggttcccgtggtg
tgtgggaaggagctggacctaggcgctctgtatatgagagtggtgtctttagggggcttc
gcgaaggtgtccgacaagaaccattgggccgaactgagcgaggatttcaattttcccaga
tgttgctcgaatgctgcttttgttttgaagcagtactaccttcgttatctagagaagtat
gaaaaggtgcatcacttcggagaggaagatgaagaagagcagccggggaatccgaaacat
ttgcttccgattggtgcaatccccacgtcatacaactaccagcagcacactgtatcagac
tatctccgccaaagctatgggctgtcgacggagttcatccctccatccgattacaacaaa
ctggtgctgtctctcctctccgggctcccgaacgaagtggacttcgccattaacgtgtgc
acgctcctgtccaacgagagcaagcacgccatgcagctagaaaaagagcccaaactcgtc
acgctgctgctggcacacgcgggggtcttcgacgactcgttaggcagcttttctgcttta
tttgggacggactggcaggagaaaacgtcacgggactttgtgaggttttggaaagatgtc
atcgaagacaatgaagtgaaagatctcatctcagacaagagctgcacaccccaaaacgca
ttggagatgagggacgtctgctgtcctctcttccacccgacacgtgccgtaggcatcgga
gacatcgagggccagcgggtgttgcaggtggcaatgattctgaggaacttgtccttcgag
gaggctaacattaaactcctggcagctaatcgcacatgtctgcgcttcctcttactgtgt
gcgcactgcaccttcatccagctgcgacagctgggtctcgacacgctcggcaacgtcgct
ggagagcttcagttggatccagtcgatttccggacgactcatctgatgtttcacaccatc
acgaagtgtttgttgtcacgggatcgttttctcaaaatgagggccatggaaattctgggg
aacctgagcaaggtggaggataacggcgttctgatctgcgagtatgtggatcaggagtcg
taccgagaagtcatcgccctcctgacgctgccggacatcatgctggtcatctccgcactc
gaggtcctgtaccagctggccgagctcggagagatcacgtgctcgaagatctcctctgtg
gagagaagcatagatcttctagtgcggttggtgtcagtggacctgcacacgttcggaccg
gacgccctgacggcagtaaaactcatcgagcatcaggcctcgagcagtcaggtctcagag
gttcggccacagcttctcgagcacgctccacaacccacgcaaggcactcctggcgccgtg
aacagggcgcctgtgcagtctacgcctccgcctgggattgtggaagtagatggagagaaa
ttcacaaatcagtggctaaatgctaatttcgaggttcatccagacggttcggtctctcgc
tctgagatgtactctgaatatctggcgacctgcagcaagatggcacggggtggcgtgtta
acatccaataacttctacaaatgcctgaggacgctgtttcctaatcacacggtgaagcgt
gtggaggacacacggctgaatggacaggctcaaatccacgtggttggtgtgcggaagagg
ccgattcctcttcccgtccagctttattatcaacagcaggccagtcctgcaccagttctc
aagcacgaaaccccctcagaaacccctcagcccctgtcagcgctgcctcctggtgtggga
gggcagcttgtccggacaccagcactaagccttactgccggacaggcagcaccacaggtg
gccttcaccatgcaccgaacgtcgcacaccaacgctcccagtgctcctgcgccagcccaa
actgttccacgactccccatgaacccgccaggacaagctgcacttcctcccccctgccct
cccgccaccgccccagttcccatacgacccaatgacattctcaaaacagccatgatccag
agctccatccccacagccaccgctgcacctgctgttcccaaccacagcgtctcacctacc
cagcagcccttgctccatcacactcccgttacactgatccagcaggggccatcaccccag
ggacacgtatttacaggtcgagtgcaaggtgttggtccttcggtggcccaacagcgcctg
caagcccctcagggacagcaaggtgccccttcccaagagtctatggtgcttgcgccgcct
cagtatgtcagtgcaccttgcacttctctggtggcaggagggcaggtcatgactgtctca
ggcatgactagcaaccgcgtcacatttcaaaatatcgcccccaaacctgcaccacaagcc
cagtcgcaacagcctcaacctccacaaccgcagcagcaaagtttagtcatcgtcagtcag
aatcaacaacacaactctgcattcgccccagccatccatcaaatcgtactgaccaacccc
agtcctcaaaccatccaaccgcagcctacgcagtctcccacttctccgaatgcaccgatc
actaatcccgcccccatgcagcaagccccgcccaacaccgttagccatatgctgtctctc
aagcgccagtttcagcagactccgccccctccgccacccccagcccaacctacctccaca
gaatccagtctgattaaacagttactgcttccaaaacgtggtccctccaccccaggtgga
aaactcatactccctgctccgcaagttcctgctcctgtgagcacaagagcgccaagcccg
caagtcgtataccaggtgaccaacagcggtccagtggcgtctcaaccgcagttaaacgtg
caactaatgcagagccccttgcaggcgaccggtgctgttcccatctccatcctcccaggg
cagatcatctccacctccacctctggaaaccttctgcaggctacgcccagcaaccaagtt
accttcacagtagtgccaaactctggcttccccggccagggagcgcaaaccccgcccaca
atcggcctgcagttgactccgcctctaccagttgcaggagccacgcccattccacctttc
cgaggtgacagaatcatctgccaaaaggaagaggaggccaaggacgccacagggctgcac
atccacgagcgcaagattgaggtcatggagaacaactccgtcaccgacggttcggccaaa
gccagcaatggtgaatccgcagaggtggacggacctgcggcaaagctgctcaacgggagg
aagtttgactcgagtctacctccataccactcagggaacagccaagcagaggcgctaaac
ggccctgtggcacaaggcggcgacagccctgggaaacagacaccctctgaacctaaaaag
ctaatggtgaatggggtgtgcgacttcgatcgatcggatgccacccatccgagcaaaaac
attccaaatcataaggcttccaaacacatggggaacggcgaggtgttgtcgccacagaaa
gtgcacgggcttttcggcctcaaggactctgttgctgctcctcagcaggacactgtcaaa
gcagagcaggtcgaacgcttggccaacgggcccagccacggcgcagagatctccaacggc
tccaactcagagacattgagcctgaggcaacagcacccacctcataaccactcttcacct
ccgcccgtttccgaaccgccgccgctgcctcccgctaacggcacctcagagagccggccg
ctgaagagaccgctggaggacggggacagaggtacctctggaatccccaccaaaatgggc
gtacggatagtgaccatcagcgaccccaacaatgctggtaacagcgccaccatggtggcc
gtgccggcgggcgcagacccaagcacagtagcaaaagtagcaatagagaatgcagcgcag
cagagagcaagtgtgccctcgccgcttcctgaaaccaatgctcagcagcccatgtcagtg
gagactccgcctccagtggatccggctgcacagggaaccaatcagagttctccagcaccc
gccctgtgtccagatcaagcacgtaaacctgggcagaacttcagatgtctatggcaggcg
tgcagacggtggtttgacacgccatcacaggtgttttaccatgcagctacctgccatggc
agtaaagatgcgtacccagggcagtgccaatgggagggctgtgaaccttttcctcgacag
agactatccttcatcacacacctccaggataagcactgctcgagggaagcgctcttagct
gcactcaaactggaggagcaaacgcaaagcagcaaccccaacacttccaagtctcctcca
gcggcggtcagcagtcctcctcctcctcccagaccacagaaagcgctcgtcaaccacccc
agtgcagctctgatggcgttacgcaggggctcgcgaaacctggtgttcagggacttcaca
gatgacaaagagggaccaatgaccaaacacattagactaactgctgccttaacgttaaag
agcatcgccaagtactccgattgtggacggaagttggtcaggcggcatgaaaatcatctc
tctgtgctggcgctgagcactatggaggtctccaccacgctcgccaaatgcctttacgaa
ctcacacgctctctgcagacctga
DBGET
integrated database retrieval system
