Carassius auratus (goldfish): 113047876
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Entry
113047876 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: tubby-related protein 4-like
KO
K24720
tubby-related protein 4
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
caua04990
]
113047876
Domain-containing proteins not elsewhere classified [BR:
caua04990
]
Other domain-containing proteins
Tubby family proteins
113047876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
113047876
NCBI-ProteinID:
XP_026065006
Ensembl:
ENSCARG00000060522
UniProt:
A0A6P6JYJ4
LinkDB
All DBs
Position
29:complement(3579318..3590441)
Genome browser
AA seq
1730 aa
AA seq
DB search
MFAAVELGPVLCSDSNILCLSWKGRVPRSEKEKPVCRRRCYEEGWLATGNARGVVGVTFT
SSHGRRDRPPPQRTNFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGMQALISYRDGFVLVGSVSGQRHWSSEINLESQISCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHEAEGITSMSWNYPSFLVEDSSGSDTDSDEHTPL
QVPRLKPLLTVCFTSGDVSLMNNYDDLSPSLIRTGLKDVVVQWCSQGDLLAVAGMERLVM
TSDPTQATRNAMVKFYNVCGEHIYSLETPAQRPISTLCWGHRDSRLFLASGPVLYVLRVE
HRVASLQLLCRQVIAGVVHEEKDLVKLSMPSRLSTYVSSAFAPTIKPPIPDPNSMREFVS
YPTSGNERLHCTMKRTEDNPEVGGPCFTLYLEYLGGLVPILKGRRISKLRPEFVIMDPKT
DGKADEVYGNSFIPSVIDSCNCSDSSDIELNDDWVGKKSPKISRGSKSPKLPRINIDPRK
SPKLSRTTQEISRSPRLPIRKPSIGSPSLIRREFPLDDITQHNYLAQVTSNIWGTKFKIV
GLAAFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISVEYINLPMFSPNVFSEDEDDLP
VTGASGITDDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNVQLDVLSNPTSTV
APPGASDQGQQDTVLNAQYTVPARYSSPGQVIFGGLDVGRLLVAQSQQQQQQQSQHHQQQ
QQLQQHYQQQQQHQQLQQQLQQYQLQHQQLLQHQHMQQQQQQHMQQQIQQMQQQQQMQQQ
LQHQIQQQHLQMQLQLQHQQMQQQLQQQHQIQIPVPALPSGQPSCPVLQLPQSTIPDVPP
TEHSAERGEHELLLKIKTTRSAPQLAEGDAVVFTAPLELSKMNPPPPYPGTVGAAVAVSA
AASTSSNSGAMGSSSSTSSSGEACLKKGDLTLYPPGAQAAQYPTPLGYERITTFDSSGNV
EEVCRPRTRLVCNQNVYTLQGPGSSATLRVSSSSSAVEGKKVQLPYASATLNRLTVPRYS
IPSGDPPPYPDTANQGGAGRNPGQRLDSSLIHATLRRNSREAALKVSQMLDPQRTLPSKA
KASALSASYQPRGPTALYTCSQCSNNGGVSAGATSSGSNGIAGGTIIRQDFPPTAGGAPH
STVIVHSNSASPLTSQSSYSLLSMDGAGGVASGGGNRERADYVNSAFTEDEALNQSLRQM
ALNTEVVSLTVKRPPPYQWDPSATEEIWVPQERTVTLPTSGPPASHKPXPLILSPTQHLD
FSRLPFVLSPKSPTSPNAATFQPAGTYQIALSYPPSAAYNGPPLQTVQASPHPTSPKEVV
TPLPFSQQDQAVVLPPGYPPNLPNLACCPLPPMYPGKASCSNLPVTPIPLHPWGSYNPCP
PMPSPPGPAPSLPPKTSHMLDKPVVSPPPQPPPLPTPPPDLQSPPESIAEAGENFQEVLS
LNESPVPQRADRFGKKNRKRLDNSRAEEANVPAISEGGNKSKKEGRALSDFNSLISSPRL
GSRDKKKPKGQKEQLKAKKLSKSTTNEFQDSSESEPELFISGDELMNQSQSGKKSWKTKR
NLRAGGCDLDEIKCRKANEKEDRGLGSQGFVYIMANKQPLWNEATQVYQLDFGGRVTQES
AKNFQIELEGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcggcggtggagctcgggcccgtcctctgcagcgactccaacatcctgtgtctg
tcctggaagggccgtgtgccccgcagcgagaaggagaagcccgtctgcaggaggcgctgc
tatgaggagggctggctggccacagggaacgcccggggggtcgtgggggtcaccttcacc
tccagccacggccgcagagaccggccccccccacagcgcaccaacttcaacctccgggga
cacaacagtgaggtggtgctggtgcggtggaacgaacccttccagaagctggcgacctgc
gacaccgacggcgggatcttcgtctggatccagtacgagggccgctggtcagtggagctg
gtcaatgaccgaggagctcaggtgagcgacttcacctggtcccacgacggcatgcaggcg
ctgatctcgtaccgcgacggcttcgtgctggtgggctcggtgagcggtcagcgccactgg
tcatcagagatcaacctggagagtcagatcagctgtgggatctggacccccgatgaccag
caggtgttgtttgggacggcggacggtcaggtgatcgtcatggactgtcacgggaggatg
ctggctcatatcctgctgcacgaggccgagggcatcaccagcatgtcctggaactatccc
agcttcctggtggaggacagcagcggcagcgacacggactcggacgaacacacgcctctg
caggtgccccgtctgaagccgctgctgaccgtctgcttcacgtctggagacgtcagtctg
atgaacaactacgatgacctctcaccctcgttaatacgcaccggcctcaaagatgtggtg
gtgcagtggtgctctcagggcgacctgctggctgtagctgggatggagagactcgtgatg
acctctgaccccacccaagccacccgaaatgccatggttaagttttataatgtttgcggt
gagcacatttactccctggagacacctgctcagaggccgatcagtacactgtgctggggt
catcgggactcgcgtctgttcctcgccagcggcccggttctgtacgtgcttcgcgtcgag
catcgcgtggccagtctccagcttctgtgtcgtcaggtgatcgccggtgtggtccacgag
gagaaggacctggtcaagctcagcatgccctctcgcctgagcacatacgtgtcttctgcc
ttcgctcccaccatcaagccccccatcccggatcccaacagcatgcgggagttcgttagt
tatccgacatcaggtaacgagcgtctgcactgcaccatgaagcgcaccgaggacaacccc
gaggtcggcgggccttgcttcaccctgtacctggagtatctgggggggcttgtcccgatt
ctgaaaggccgtaggattagcaaacttcgccctgaatttgtcatcatggacccaaagact
gatgggaaagcagatgaagtctatggaaacagcttcatcccctccgtgattgacagctgc
aattgctcagactctagtgacattgaactcaatgatgattgggttggaaagaaatcacca
aagatctcaagagggagcaagtctcccaaacttcccaggataaatatagatccccgtaag
tcccccaagctctcccgcaccacacaggaaatatcccgatcgcctcggctccccattcgc
aagccgtccattggctctccgagtctgattcggcgggagtttccgctcgatgacatcaca
cagcacaattatcttgcgcaagttacatctaacatatggggaacaaagttcaaaattgtg
gggcttgcagcatttttgccaacaaatctaggagcagttatctacaagacaagtctgctt
cacctccagcccagacagatgaccatctacctccctgaggtgaggaagatctcggtggaa
tacattaacttgcctatgtttagtcctaatgtcttcagtgaggacgaggatgacctgccg
gtcacaggagcatcaggaatcactgatgataatcctccttgcactgttaacatacccatc
gcccccatacacagccccgcgcaagccatgtccccgacccagagcatcggccttgtccaa
tccctgttagccaatcaaaacgtccagttggatgtgttgtccaatccaacatcgactgtg
gcaccacctggggcttctgaccaaggacagcaggacactgtgctcaacgctcagtacacc
gttcctgccaggtattctagtcctggacaggtcatctttggaggtttggatgttggtcgg
cttttagttgcgcagtcccaacaacagcagcagcagcaatcacaacatcatcagcagcag
cagcagctgcaacaacattatcagcagcagcagcagcatcaacagctacagcagcagctg
caacaatatcagctgcagcatcaacagttgttgcagcatcagcacatgcagcagcagcag
cagcaacacatgcaacagcagatccaacagatgcagcagcaacagcaaatgcagcaacag
cttcagcatcaaatacagcagcagcatctgcaaatgcaactgcagctgcagcaccagcaa
atgcagcagcagttgcaacagcagcatcagatccagatccctgttccagctttgccctca
ggtcaaccatcatgcccagtccttcagcttccgcagagtaccatcccggacgttccccca
acagagcacagtgcggagcgtggggaacatgagctcctgctcaaaattaaaaccactcga
tctgccccacaactggctgagggtgatgcagtggtgtttactgcccctcttgagcttagc
aaaatgaatcctccccctccttacccaggcacagttggtgcagcagtggcagtttcggct
gctgcttctactagttccaactctggggcaatgggaagcagctccagcacttcatcctca
ggggaagcttgtctaaagaaaggggatttgaccttgtatccacctggtgcacaggcagct
cagtacccaaccccactgggctacgaacgcatcaccacatttgacagcagtggaaatgtg
gaggaggtgtgccgtccccgcacgcgactcgtttgcaaccagaacgtttacacgctgcag
ggcccgggaagctctgccaccctcagggtctcatcatcttcctctgctgtggaggggaag
aaggtgcagttgccctacgcctcagccacgttgaaccgtctcactgtgccaagatactct
atacccagcggggacccgcccccttaccctgatacagccaatcagggcggagcggggcgg
aaccctggccagagattggacagcagcttgattcacgctaccttgaggcggaacagtcgt
gaagctgcgctgaaggtttctcagatgctggacccccagaggaccctaccctcgaaggca
aaagccagtgctttgtctgcttcctaccagccgagagggccgactgctctttacacatgc
agtcagtgcagtaacaacggtggtgtcagcgctggggccaccagcagtgggagtaacgga
atagctggggggaccatcattaggcaagatttcccaccgaccgcaggtggtgcacctcac
agcaccgttatagtgcactccaacagtgcctcgcctctgacttcccagtcctcctacagc
ctgctcagtatggatggagccggtggagtggccagtggaggtggaaacagggaaagggct
gactatgtcaactctgcctttacagaggacgaggcattaaatcagtctttaaggcaaatg
gctcttaatacggaggtagtgagtttgacagtcaaacggcctccaccgtatcaatgggat
ccgtctgctactgaagagatctgggttccccaagagcgtacagtgactctgcccacgtct
ggacctcctgcatcccacaaaccanccccactcatcctcagccctacacagcatttggac
ttttcccgtcttccgtttgtcctctcgcctaaatctccaacgagccctaacgctgcaact
ttccaaccagcaggaacataccagattgcactgtcctatccaccaagtgcagcctacaat
ggtcccccacttcagacagtgcaagcttctccacatcccacttctcccaaagaggtagtt
actcctcttcccttttcccagcaagaccaagcagttgtcttgccacctggttatcctccc
aatttgcctaaccttgcttgctgtcctctcccaccaatgtaccctgggaaagcttcttgt
tctaatctgcctgtgactcccattcctcttcatccatggggttcttataatccctgtcca
cccatgccaagccccccaggtcctgccccatcccttccaccaaagacctcccacatgctg
gataaacctgttgtttctcctccccctcaaccacctcctctacctacgcctcctccagac
ctccagagtcccccagaatccatcgccgaagctggggagaactttcaagaggtactctca
ctgaacgaaagcccagttcctcaaagagcagaccggtttggcaagaagaaccgcaagcgt
ttggacaacagtcgggcagaggaagctaacgttccggcgatctcagaaggaggcaacaag
tccaaaaaagagggccgtgccctcagtgacttcaactccctcatctccagtccgaggtta
ggcagtcgagacaagaagaaaccgaaaggccagaaagagcagctgaaagccaaaaagcta
agcaagtccaccacaaacgagttccaggacagctccgagagcgagccagagctcttcatc
agtggagacgagctgatgaaccagagtcagagtggtaaaaagagctggaaaacaaaaagg
aacttgcgggcaggaggttgtgatctggatgaaatcaaatgccgaaaggctaatgagaaa
gaagaccgtggcctcggcagccaagggttcgtctacatcatggccaacaaacagcctctt
tggaacgaagccacacaggtctaccagctggactttggaggaagagtcacgcaggaatca
gcaaagaacttccagattgagctcgaggggagacaggtgatgcagttcggaaggatcgac
gggaacgcatacatcctggactttcagtaccccttctcagctgtgcaagcttttgctgta
gcacttgctaatgtcacccagcgcctcaagtga
DBGET
integrated database retrieval system
