Carassius auratus (goldfish): 113048165
Help
Entry
113048165 CDS
T07313
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113048165
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113048165
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
113048165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
113048165
NCBI-ProteinID:
XP_026065545
Ensembl:
ENSCARG00000036532
UniProt:
A0A6P6K134
LinkDB
All DBs
Position
29:complement(14322304..14346978)
Genome browser
AA seq
796 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGREFSKSGHEGAVEAMRKDPIVVQVLGPSSRNPNS
LQEVCVVDVCTQTDITFEHIMALAKMRPTTPPVPDICPFLLSDSCHSIQTMEHEYFDCPE
YVASTQAEVDRAVEFECEEVELCRMNSQEKLGLTLCYRTDDEDDIGIFVGQVELNSIAAR
DGRIREGDRILQINGHDVQNREEAVALLSNENSRSIVLLVTRPEGQMDGSWLDEDHQDFL
EELKMEILEEQKEEGILQTAGCVKRSKRYEDASGSTDTATCSSTILEKDSGVKCSFEESS
ECESLFPPQTWTQKQFRDRWEAGSHLVPMDTVSLNRQEKGQEGRLSENGVECDHFQQLLE
LKCQIRNGGECGLVYRRSSTIECSLTEQGGSGVARELHMLNEELRSIERECQSIMQAHQL
RRSKHDSPRMDKENRLRRGKLADITEYPERLQSEKLRDKDSSSAYNTAESSRSTPLGTEC
SPDHSLQRRVHMTNQRNLQSTQQLQTPYSSPILSLPSQSSPTCSRAHTYTSSTPPLQTPI
TSPGSQGPSQAFSSSLEQSPSNPSESDPALPADDERCEKERNRNRVAAAHHYHSPYHSNT
TTQPPSTRHYQSYLQLLQQHSSSSLEYSQSQLSLLSLRGRAGPTPPGRLEWKVKVRADGT
RYVARRPARDRILRERALRIREERSGGMTTDDDAVSELKMGRYWSKEERKQQLARAREQR
RRREFMQRSRLECLRETMGTASGEVSILELSHKKMLKKRNKKILDNWMTIQELMSHGARA
PEGTKVHNAFLSVTTV
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtaacctgtgcacgctgcagaaaagagaggagcactacaagctgctgtatgag
atcgcacaggtgaatgggcgtgaattttccaagtctggacatgagggagcagtggaggcc
atgcgcaaggatcccattgtggtgcaggtgttggggccctcgtcccggaacccaaacagc
ctacaggaagtgtgtgtggtggatgtgtgcactcagacagacatcacatttgagcacatc
atggctctggctaagatgagacccaccaccccaccagtgccagacatctgccccttcctg
ctgtcggacagttgtcattccattcagaccatggagcatgaatattttgattgtccagaa
tatgtggccagcactcaggcagaggtggacagggcagttgaatttgagtgtgaggaggtt
gaactctgtcgaatgaacagccaggaaaagctgggtcttactctctgttaccggactgat
gatgaggacgatataggcatttttgttggtcaggtcgagctcaacagcatagctgcgagg
gatggacgcatcagagagggagacagaattttacagataaatggtcatgatgtgcagaac
agggaagaggctgtcgctctcctctcaaatgaaaattccagatccatagtgttgcttgtc
accagacctgaaggacagatggatggaagctggctcgatgaggaccatcaagatttccta
gaggagctgaagatggagattttagaagaacagaaagaggagggaattcttcaaacagca
ggttgtgtaaagcggtctaaaagatatgaggatgcctcaggaagtactgatacagctaca
tgttcctcaaccattctggagaaggacagtggtgtaaaatgcagctttgaggaaagctct
gaatgtgaatcgctctttcctccccaaacatggactcaaaaacaatttcgggataggtgg
gaagcgggctctcatttggttcctatggacactgttagcttaaacaggcaggagaagggt
caggaggggaggttgagcgagaatggggtggagtgtgaccattttcagcaactcttggag
ctcaagtgccagatccgtaatggtggagaatgcgggttggtctacaggcgaagcagtact
atcgagtgcagcctgacggagcagggtggaagcggagtggcacgggagctgcacatgctc
aacgaagagctgcgtagcattgaacgtgagtgccagagcatcatgcaagcccaccagctg
cgcaggagcaagcacgactctcctcgaatggataaagaaaatcgactgcgtcgtggcaag
cttgcggatattactgagtatcctgagagactacaaagtgagaagctcagagataaagac
agctctagtgcctacaatacggctgaaagttcccgttcaactccactgggaaccgaatgt
tcaccagatcactctctacagcgtcgggtccatatgaccaaccagaggaaccttcagagt
acccaacaattgcagactccctacagtagtcccatcttgtcattacccagccaaagtagc
cctacttgcagtcgtgcccatacgtacaccagctccacaccacccttacagacccccatc
accagtcctggttcacaaggacccagtcaggccttctccagcagcttggagcaaagcccc
agcaacccttcggagtcagatccagcgcttccagctgatgatgagcgctgtgaaaaagaa
agaaaccggaatagggttgcagctgctcatcactaccattcgccctaccacagcaacacc
acaacccagcctcccagcacaagacactaccagagttacctacagctcctacaacagcat
tcctcttcctctcttgagtactcccagagccagcttagcctcctcagccttcgtggacgg
gctggacccacgccacctggcaggcttgaatggaaggtcaaagtgcgagcagacggaacc
aggtatgtggcacgtcggcccgcaagagatcgcatcctgcgcgaacgagccttacggatc
cgagaggaacgcagcggtgggatgactacagatgacgacgcagtcagcgagttgaaaatg
ggtcgatactggagtaaagaagaacgcaagcagcagctagcacgggccagagaacagcgg
cgcaggagagagttcatgcagaggagccggcttgagtgcctcagagagaccatggggacg
gcaagtggagaggtcagcatcctggagctcagtcataagaagatgctgaagaagcgaaac
aagaagatccttgacaactggatgaccattcaagagctcatgagtcatggagcacgagcc
cccgagggtaccaaagttcacaacgccttcctttctgtcaccacagtatag
DBGET
integrated database retrieval system
