Carassius auratus (goldfish): 113048238
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Entry
113048238 CDS
T07313
Name
(RefSeq) interferon a3-like isoform X1
KO
K05414
interferon alpha
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04060
Cytokine-cytokine receptor interaction
caua04217
Necroptosis
caua04620
Toll-like receptor signaling pathway
caua04621
NOD-like receptor signaling pathway
caua04622
RIG-I-like receptor signaling pathway
caua04623
Cytosolic DNA-sensing pathway
caua05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
113048238
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
113048238
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
113048238
04621 NOD-like receptor signaling pathway
113048238
04622 RIG-I-like receptor signaling pathway
113048238
04623 Cytosolic DNA-sensing pathway
113048238
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113048238
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
caua04052
]
113048238
Cytokines and neuropeptides [BR:
caua04052
]
Cytokines
Interferons
113048238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
DOCK_C-D_N
LAMB1
Z1
OmpH
DUF4446
Csx1_CARF
Motif
Other DBs
NCBI-GeneID:
113048238
NCBI-ProteinID:
XP_026065708
Ensembl:
ENSCARG00000002638
UniProt:
A0A6P6K0Q2
LinkDB
All DBs
Position
3:complement(12091695..12094941)
Genome browser
AA seq
183 aa
AA seq
DB search
MKQTQMWTYICVIFVTLLSQCSACRWLGRYRMVNADSLTLIEKMGGHPGTVKVRFPGHLY
NLIGDAKVEDQVRFLVLNLDQIINLMDSKEHMNPEQWKLVEYFLKDLHRQSSELKECVAQ
YQKPSHMESYKKKITRHFRTLKKSLKKEKYSSHAWEQIRRAVKTHLQRMEIIANNANKSL
ARV
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaactcaaatgtggacatatatttgtgtgatatttgtaactctgctgagtcaa
tgctccgcttgcagatggctcggcagatacaggatggtgaacgccgattctctgacactg
attgagaaaatgggtggacatccagggactgttaaggtgcgatttccaggacacctgtac
aacttgattggagatgctaaggtggaggaccaggtgaggtttcttgtcttgaacttagat
cagatcatcaacctcatggattccaaagaacacatgaatccagagcaatggaaactagtg
gaatatttcctaaaagacctgcacaggcagtcatctgagctcaaagaatgtgtggcccaa
taccaaaagccgtcacatatggagtcatataagaaaaagataacaaggcacttcaggact
ttaaagaagagtttaaagaaagaaaaatatagttctcacgcatgggagcagatccggaga
gcagtgaaaacccaccttcagaggatggagatcatcgcaaacaatgcaaacaagtccctg
gcaagagtttaa
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