Carassius auratus (goldfish): 113048246
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Entry
113048246 CDS
T07313
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K05636
laminin, beta 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113048246
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113048246
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
F5_F8_type_C
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
113048246
NCBI-ProteinID:
XP_026065723
Ensembl:
ENSCARG00000019641
UniProt:
A0A6P6K0S1
LinkDB
All DBs
Position
29:17553501..17578614
Genome browser
AA seq
1766 aa
AA seq
DB search
MWIIQITALTISIALHGLAQSPNHNDKCREGSCYPASGDLLIGRAHRLTASSTCGLDGPE
TFCIDEKNYFECDSRETYNEFTSPNSHTIENVVTTFAPNRLKTWWQSENGVENVTIQLDL
EAEFHFTHLIMTFKTFRPAAMLIEHSADYGRSWQVYRYYAFNCTESYPHVPQGPIRKVYD
VICDSRYSGIQPSTGGEVIFRALDPALKIPDPYSPHIQNLLKITNLRIRMEKLHTLDDDL
FDERDEVKEKYYYALYDMVVRGNCFCYGHASKCAPVGDEAGVEGMVHSHCMCNHHTTGLN
CEECEDFYQDLPWRPAVGREKNACKRCECNHHSHSCHFDMAAYLSSGNRSGGVCDDCQHN
TEGQWCENCKPFYYKHPGRDIRDPRICEPCDCDPRGSLNGGLCDSATHVLRDMIAGQCRC
KANVEGQRCDYCKKGHYGLSDDPLGCQPCSCNPLGTFPKGSPCNIQTGSCYCKRLVTGRN
CDLCLPQHWGLSNDMDGCRPCDCDVGGALNNNCSRETGQCACKKHMFGRRCDQVHSGYYI
PALDHYIYEAEDALFGPEVKVVQRTLPLDRKPTWTGNGFVNIPEGETLRFNIYNLPRSME
YNLMIRYEPLLPDEWEKVVVQRERPRDTYPSAHCTSTYSDEQTISLHPGSRYVVLPGPVC
LEKGQNYTVKINFRQYSSYSYHTSPHTLVDSMVLLPEVQDLDLFSGGAQQWENWEMFQKY
RCMERSQGVIKIPLTNICKDFIFSVSALLHNGALECKCDPQGSLSTVCDNIGGQCRCRPN
VLGRNCDTCAPDTYLFGPSGCRPCDCNPLGSQNPFCHPTTGQCLCVPGAFGRQCGNCKPN
HWDFPQCQPCFCNGNSEQCHTVTGECLNCRGHTTGHNCERCESGYHRNTLLGSSEPCRPC
MCPNGPGSGMEFAESCYQNPSSLQMVCVCNSGYKGPKCEECASGYYGDPQVPGGRCHPCQ
CNGNINMQDPGSCDARTGACLKCLFHTDGNACQYCSHGYYGDAHTQNCRKCMCHLVGSSR
QSCADGLCECDRVSGQCPCLPGVVGQQCDRCAPNTWNINSGKGCLPCQCNPEHSYTASCD
RLTGECSCKPGFGGTICEECRELFWGNPEVQCHACDCDPRGIATQQCDKMTGECVCVEGV
AGRSCDSCGRGYVGTFPDCGPCHHCFSEWDVNVGELTNRTQRLVDTVEDMKETGVATPYK
DIISSLDDETRQLRQILEDDKVQQMLTHMQRMLQQANETASVLRMSIDRSEKDLENVSAD
NQHALESLKNLTEEAQNLQEISSDKQQQILNIKHSDPRGAADSIREYNKESGEAEFRVNK
AVSDPKSTVKESAQIRKAAETKLESKEEEFNRTHQLHLQRLDKIGSEMDSTDLSQLSHRL
CGGASGLDGCGNCGGLGCVSEDGMSQCGGEGCETIVTQIQETLNKVKNQDALHAIGEIGK
LSKMVSDARGHADKSKLNAQDVLVRANQSKARVEQANEELRDLIQQIRDFLTNETEPKRI
EEVADEVMKLSLPVSVPGALKNVTTEIREHVARLTQVDDILAQTAENAHTAERILQEAQA
ADERATALKQATDEVKETLEDTERAQTAASEKLKEVEKGINQTKHQIADVQSKTEATEFK
LSSSTVTLLDIEREVNELQQKTLETYSSENQTQKQTDNINAEIKHTEREFDSLMQHEYKL
ASGVIDQKGAAVFNAHQKAEQLRQEAKDLLKDATKKLQRLSELEKSFVAYQRILVEKAQE
MDGLESEARDVLQDLSQKITIYSTCA
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgtggattatccagatcacagctcttactatatctattgctttgcacggattagcacaa
tcacccaatcacaatgacaagtgcagagagggtagttgttaccctgcttcaggtgatttg
ctgatagggagagcacatcgtcttacggcctcctccacctgcggactggatggaccagag
acattctgcattgatgagaaaaactattttgaatgtgattcccgagagacgtacaatgag
ttcaccagccccaacagccacaccattgagaatgtggtgacaaccttcgctcccaaccgc
ctcaaaacctggtggcagtccgagaacggagttgaaaatgtgaccattcagctggatttg
gaagccgaattccacttcacacacctcatcatgacctttaagaccttccggccagcagcc
atgctgattgagcattcggcagattatggaaggagctggcaggtgtatcgttactatgct
tttaactgcactgaatcctatccgcacgtccctcaggggccaatcagaaaagtgtatgat
gtcatttgtgacagccgctattcaggcattcagccatcaacaggaggagaagtcatcttt
agggcacttgatcctgctttaaagattcctgacccttacagcccacacattcagaactta
ctgaagatcacaaacttgcggatacggatggaaaagttgcatactttagatgatgatctg
tttgatgagcgagatgaggttaaagagaaatactattatgctctatacgacatggttgtc
cgtggcaactgtttctgctatggccacgcctccaagtgtgcgccagtcggcgatgaggca
ggggtcgagggcatggttcatagtcattgcatgtgcaatcaccacaccactggactgaac
tgtgaagagtgtgaggacttttaccaagatctgccctggagaccagcagtgggcagagag
aaaaatgcttgcaagagatgtgagtgtaaccatcactcgcattcctgtcatttcgacatg
gcggcgtatctgtcatcgggaaatagaagtggaggagtgtgtgatgactgtcagcacaac
acagagggccagtggtgtgagaactgcaagcccttctactacaagcaccctggcagggac
atcagagaccccaggatctgtgagccctgtgattgtgacccacgtggttctctgaacgga
ggcttatgtgacagtgctacacatgttctaagagatatgattgccggacagtgtcgttgc
aaagctaatgtggagggacaacgttgtgactactgcaaaaagggacactatggcctcagt
gacgacccattaggctgtcagccatgcagctgtaatcctctaggtacattcccaaaagga
agcccctgtaatatacagacaggaagttgctactgcaaacgtcttgtgaccggacgaaac
tgtgacctgtgtctgccacagcactggggtctcagtaatgatatggatggctgcagacct
tgtgactgtgacgtaggtggggctttgaataataattgttctagggagacagggcagtgt
gcatgtaagaaacatatgtttggtaggcgttgtgaccaggtgcattctggatactacatt
ccggcactggaccactatatttatgaggctgaggatgctttgtttggaccagaagtaaaa
gtggttcaaagaacattacctttggatcgtaaacccacctggacgggtaatggatttgtg
aatataccagagggtgaaacactgaggttcaacatttacaatttaccacgatctatggaa
tacaacttaatgatccgctatgaaccactgttgccagatgaatgggagaaggttgtagta
cagagagagcgccccagagacacttacccatcagcacactgcacttctacatatagtgat
gagcagaccatctcactgcaccctggatccagatatgtagttctgcctggtccagtgtgt
ttggagaagggtcagaattacacagtaaaaattaacttccgccagtactcatcatacagc
tatcacacttctcctcacacacttgttgattcaatggtgcttttgccagaggtgcaagac
ctggatctattttctggtggagcccagcagtgggaaaactgggagatgttccagaaatac
cgatgtatggaacgcagccagggtgttattaaaatccccttaaccaatatttgcaaagat
tttatcttcagtgtgtcggcactactgcacaatggagctcttgagtgtaagtgtgacccc
caaggttctctgagcacagtgtgtgacaatatcggtggacagtgtcggtgtcgacccaac
gttttaggtaggaactgtgacacctgtgccccggacacctacctatttggaccctcggga
tgtagaccatgtgactgtaacccacttggctctcagaaccctttctgccaccccacgacg
ggccaatgtttatgtgtgccaggggcatttgggcgccagtgtggcaactgtaagcccaac
cattgggacttccctcagtgccagccctgcttctgtaatgggaacagtgaacaatgccac
acggttacgggcgagtgtctgaactgcaggggtcacaccacaggccacaactgtgagagg
tgtgaaagtggttatcaccgtaacacactgctgggctccagtgagccatgtcgcccttgt
atgtgtcctaatggacctggaagcggaatggagtttgctgagagctgttaccaaaatccc
agctctctccaaatggtctgtgtctgcaactcaggctacaaaggacctaagtgtgaggaa
tgtgcctctggttattatggtgaccctcaggtaccaggagggcgttgccatccgtgtcag
tgtaatggaaatattaacatgcaggaccctggatcatgtgatgcccgcactggtgcctgt
ctcaaatgcctgtttcacactgatggcaatgcatgccagtactgcagtcatgggtattat
ggagacgcccatactcagaactgcaggaaatgtatgtgccatctcgtgggaagttccagg
caaagttgtgctgacggcctgtgtgagtgtgacagggttagcgggcagtgcccatgtctg
cctggtgtggtgggtcagcaatgtgaccgctgtgcccccaacacatggaacatcaacagt
ggaaaaggatgcctaccttgccagtgcaaccctgagcattcttacacagcctcgtgcgac
cggctgaccggtgagtgttcctgtaagcctggttttggaggtacaatatgtgaggaatgc
agggaactgttctggggcaatcctgaggtccagtgccacgcatgtgactgtgatccacga
ggcattgccactcaacagtgtgataagatgactggcgagtgtgtgtgtgtagagggtgta
gccggccggagttgtgactcatgtggtcgtggctacgttgggacctttcctgactgtggg
ccctgtcatcattgtttcagcgaatgggatgttaatgtgggagagctgaccaatcgcacg
cagagactggtagatacagtagaggacatgaaagagactggtgtggctacgccctataaa
gacatcatatcaagtctggatgatgaaaccaggcagctcagacaaattctggaagatgac
aaggttcagcaaatgctcacacacatgcagaggatgctgcagcaagccaatgagacggct
tcagtcctgagaatgtctatagaccgatctgaaaaagatctggagaatgtatctgctgac
aatcagcacgctctggagagccttaaaaacctgacagaggaggcccaaaacctacaagag
atctcctctgataaacagcagcagattctgaacatcaaacattcagaccccagaggtgcg
gcggacagcatcagagagtataacaaggaatctggcgaggcagagtttcgtgtcaataaa
gctgtctctgacccaaaaagtacggttaaagagtctgctcagatacggaaagctgctgag
accaaactagaaagcaaagaggaagaatttaaccggacgcatcagctgcatttacagagg
ctggacaaaattggatctgaaatggactccacagacctttcacaactaagccatcggctg
tgtggaggggcgtctggtctagatggttgcggaaactgtggtggtctgggatgtgtgagc
gaggatggcatgtcccagtgtgggggggaaggatgtgagaccattgtgactcaaattcaa
gagaccttgaacaaagtcaaaaaccaagatgccctgcacgctataggagaaataggcaag
cttagcaagatggtgtcagatgctcgaggacatgcagataagtccaagcttaatgctcag
gatgtgttagtgagagccaatcagagcaaggcacgagtggaacaggccaatgaggagctc
agagacctcattcagcaaatacgagacttcctcacaaacgaaactgaaccaaagcgtata
gaggaagtagctgatgaggtgatgaaactgagtttgccagtgtcagtgcctggtgctctg
aagaacgtgaccacagagatccgcgagcatgtggccagactgacccaggtggatgatatt
ctggcccagacggcagagaacgcacacactgcagagagaatcctgcaagaagcacaggct
gccgatgagagagctactgcactgaaacaggccactgatgaggtgaaggaaactctagag
gatactgagcgtgctcagactgctgccagcgaaaaactgaaagaggtggagaaaggcata
aaccaaacaaaacatcaaatcgctgatgtacaatcaaaaactgaagcgactgagttcaaa
ctgagtagcagcacagtaacacttctggatattgagagagaggttaatgaactccaacag
aaaactctagaaacgtacagcagtgaaaatcaaactcagaaacaaactgataacatcaac
gcagaaatcaagcacacagaacgggagtttgactcactcatgcaacatgagtacaaactg
gccagtggtgtcatagatcagaagggagcagctgtgtttaatgctcatcagaaagctgag
caactccgtcaggaagcaaaggatctactgaaagatgccacaaagaaactacagagactg
agtgagttggagaaatcatttgtggcatatcagcgcattctggtggagaaagctcaggag
atggatgggctggagagtgaggccagagatgtactgcaagatctcagtcagaaaatcact
atctacagcacctgcgcttaa
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