Carassius auratus (goldfish): 113048454
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Entry
113048454 CDS
T07313
Name
(RefSeq) regulator of nonsense transcripts 2-like isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113048454
03015 mRNA surveillance pathway
113048454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113048454
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113048454
mRNA cycle factors
P-body specific factors
113048454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
113048454
NCBI-ProteinID:
XP_026066041
Ensembl:
ENSCARG00000013872
UniProt:
A0A6P6K1H6
LinkDB
All DBs
Position
29:complement(6275821..6294482)
Genome browser
AA seq
1287 aa
AA seq
DB search
MSSMPAERKKSVNTEERETGSFSNKERDAERQAAVPRDKSKDQTKMSTKTAEEKKRRAEE
DKRKKEEKERKKKEEEKQRAEEEQKKKEEEEKRQQEEQEKKLLEEEAKRQKEEEAAQIKE
KEEAEQLQQEAWERHHSRKELREKNQRVQETRPEEAFFSRLDSSLKKNTAFVKKLRTLTE
QQRGSLSQDFNSLNLSKYIGEAVSSMVEAKLKISDVGCAVHLCSLFHQRYADFAPLLLAA
WKRHFEARKEEKAPNVSKLRTDLRFIAELTIVGLFTDKEGLSLIYEQLKNIIATDRDAHT
HVSVIISFCKHCGDDIAGLEPRKVKNAVEKFGSTFPPSQIINTEKQQPFQNLLREYYTSL
TKHLKKDHRELQSIERQNRRILHSKGELSEDRHKQYEEFATSYQKLLANTQTLADLLDEN
MPELPVDKTIQEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENMVDLKAFVPAILF
KDNEKSSQTSKEGQEANSTEELEIELEALDITDEPMDLDTAEETESEELAKKILDEQGGR
GGQHRLSSQTHRGRLHPAAPKLHQQRPDRQGCYGLLYEHEHQVQPQEVGPSSFHGAQTEV
CVCIHSICARSDLKSGCAWVCVCVCVCVRLDLLPFYARLVATLHPCMCDVAEDLCSMLKG
DFRFHIRKKDQINIETKNKTVRFIGELAKFKMFSKTDTLHCLKMLLSDFSHHHIEMACTL
LETCGRFLFRSPESHLHTSVLLEQMMRKKQAQHLDVRYVTMVENAYYYCNPPPMEKTVRR
KRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLSWHEPDEKSYLICCMINIWNVKYNSIHC
VANLLAGLVAYQEDVGIHVVDGLLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVES
AVVFRTLFSFISFGVNTDGSASPLDPPEHLFRIRLVCTLLDTCGQYFDRGSSKKKLDCFL
VYFQRYVWWKKSLDVWTKDQPFPIDIEYMITDTLELLRPKMKLCSSLDEACAQVTQLERE
FLVKLGLEKDGRSSSSMGENEPLEEEEEDDDEDERGAETEEQSGNESEMNEPEEEDGSEN
EEEEREEEEENTDYLTDSNKENETDEENNEVTIRGGGLRHVSCAEDEDFIQALDKMMLEN
LQQRTGDAVKVHQLDVAVPLQLKSQLKRSSAPSCTADTDISDTMQFVMLTRRGNKQQFKI
LNVPLSSHLAANHFSQQQVEQEERMRMKKLTLDINERQEQEDYQEMMQSLAQRPAPANTN
RERRPRYQHPRGAPNADLIFKTGGRRR
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtatgcctgcggaacgaaagaagtccgtcaacacggaggagagagagacgggc
tccttcagcaacaaggaaagagacgcagagcgacaggccgctgtgccccgagacaagagc
aaagaccagaccaagatgagcaccaagacggccgaagagaagaagagacgggccgaggag
gacaagaggaagaaggaggagaaggagcggaagaagaaagaggaggagaagcagagggca
gaggaggagcagaagaagaaagaggaggaggagaagagacagcaggaggagcaggagaag
aagctcctggaggaggaagctaaacgacagaaagaggaagaggctgctcagatcaaggag
aaggaggaggcggagcagctgcagcaggaagcgtgggagcgtcatcacagcaggaaggag
ctgcgagagaagaaccagcgcgtgcaggagacgcgtcccgaggaggctttcttcagccgc
ctggactccagcctgaagaagaacacggccttcgtcaagaagctccgcacgctcacggag
cagcagcgcggctcgctgtcgcaggacttcaactcgctcaacctcagcaagtacatcggt
gaagccgtgagctccatggtggaggccaagctgaagatctcagacgtgggctgcgccgtg
cacctctgctcgctcttccaccagcgctacgccgacttcgcaccgcttctcctcgccgcc
tggaagagacacttcgaggccagaaaggaggagaaggcgcccaacgtgagcaagctgcgg
accgacctgcgcttcatcgccgagctcaccatcgtggggctgttcacggataaagaagga
ctgtcgctcatctacgagcagctgaagaacatcatcgccaccgaccgagacgcgcacact
cacgtctccgtcatcatcagcttctgcaagcactgcggagacgatatcgccgggctggag
ccgaggaaggtcaagaacgcggtggagaagttcggctcgaccttccctcccagtcagatc
ataaatactgagaaacagcagccgttccagaacctgctgagagaatattacacctcgctc
accaaacacctgaagaaagaccaccgagagctgcagagcatcgagagacagaacaggcgt
atccttcactctaaaggagagctcagcgaggacagacacaagcagtacgaggagttcgcc
acgtcctatcagaagctgctggctaacacacaaacgctggccgatctgctggacgagaac
atgcctgaacttcctgtggacaagaccatccaggaagagcacggtccgggcatcgatatc
ttcactccggggaaaccgggagagtatgatctggaaggagggatctgggaggacgaggac
gcgcgtaacttctacgagaacatggtggacctgaaggcgtttgtccctgcgatcctcttc
aaggacaacgagaagagcagccagaccagcaaagagggacaggaggcaaacagcactgag
gagctggagatcgagctggaagcgctggatatcaccgatgagccgatggatctggacaca
gccgaagagaccgagagtgaagaactggccaaaaagatactggatgagcaaggaggacga
ggaggccagcaccggctctcatctcaaactcatcgtggacgccttcatccagcagctccc
aaactgcatcaacagagacctgatagacaaggctgctatggacttctgtatgaacatgaa
caccaagtccaaccgcaggaagttggtccgagctcttttcacggtgcccagacagaggtg
tgtgtgtgcattcatagcatctgtgctcgttcagatttgaagagtggctgtgcatgggtg
tgtgtgtgtgtgtgtgtgtgtgtcaggctggatctgctgccgttctacgctcgtctggtg
gccacgcttcacccgtgtatgtgtgacgtggctgaagacctctgctccatgctcaaagga
gatttcaggtttcacatcagaaagaaggaccaaatcaacattgagaccaagaataagacg
gtgaggttcatcggggagctggccaagttcaagatgttttccaaaacggacacactgcac
tgcctcaagatgctgctgtctgatttctctcaccatcacattgagatggcctgcacactg
ctggagacgtgtggacgctttctcttccgctcaccggagtctcacctgcacacgagcgtc
ttactggagcaaatgatgcgtaagaagcaggctcagcatctggatgtgcgttacgtgacg
atggtggagaacgcgtattactactgcaaccctccgccgatggagaagacggtgcgcagg
aagagaccgccgctgcaggagtacatccgaaaactgctctacaaagacctgtccaaggtc
accactgagaaggtgttgaggcagatgaggaagctgtcctggcacgagcctgatgagaag
agttatctgatctgctgtatgatcaacatctggaacgtcaagtacaacagcatccactgc
gtggccaacctgctcgctggactggtggcgtatcaggaggacgtgggcattcatgtggtg
gacggcctgctggaggacatccgcctcggcatggaggtgaaccagcccaagtttaaccag
cggcggatcagcagcgctaagtttctgggcgagctgtataactatcgtatggtggagtct
gccgtcgtcttccgcacgctcttctccttcatctcgttcggcgtgaacacagacggttct
gcgagcccgctggacccccccgagcacctgttccgcatccgcctggtctgcaccctgctg
gacacctgcggacagtacttcgaccgcggctccagcaagaagaagctcgactgcttcctc
gtttacttccagaggtacgtctggtggaagaagagtctggacgtgtggactaaagaccag
ccgttccccatcgacatcgagtacatgatcacagacacactggagctgctgcggcccaag
atgaagctgtgctcgtctctggacgaggcctgtgctcaggtcactcagctggagagagag
ttcctcgtcaaactgggcctggagaaagacggccgctcctccagctccatgggcgagaac
gagcctctggaggaggaggaggaggatgatgatgaagacgagcgaggagcggagaccgag
gagcagtctgggaacgagagcgagatgaatgaacctgaggaggaggacggctctgagaac
gaggaagaggagcgtgaggaggaagaggagaacacggactatctgaccgactccaacaaa
gagaacgagacggatgaagagaataacgaggtcacgatccgcggcggaggactcagacac
gtgtcctgtgccgaggacgaggacttcatccaggcgctggacaagatgatgctggagaac
ctgcagcagcgcactggagatgcagtgaaggtccatcagctggacgtggccgtccctctg
cagttaaagagccagctgaagagaagctccgccccttcctgcaccgcagacacagacatc
agcgacaccatgcagttcgtcatgctcacacgcaggggcaacaaacagcagtttaagatc
ctgaacgtgccgctgtcgtctcatctggcggccaatcacttcagccagcagcaggtggag
caggaggagcgcatgcgcatgaagaagctgacgctggacatcaacgagcggcaggagcag
gaggactatcaggagatgatgcagtcgctcgctcagagacccgctccagcaaacaccaac
agagagcgccggcctcgataccagcaccccagaggagcacccaacgctgacctcatcttc
aagaccggcggcaggagacgctga
DBGET
integrated database retrieval system
