Carassius auratus (goldfish): 113048544
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Entry
113048544 CDS
T07313
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113048544
Enzymes [BR:
caua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113048544
Spliceosome [BR:
caua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113048544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
113048544
NCBI-ProteinID:
XP_026066207
Ensembl:
ENSCARG00000004740
UniProt:
A0A6P6K510
LinkDB
All DBs
Position
3:12999420..13005825
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AA seq
427 aa
AA seq
DB search
MAENDVDNELLDYEEDEEPQGAPESAAPVGKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVAVFFGGMSIKKDEDILKKSCPHIVVGTPGRILALVR
NKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatgacgttgacaacgagctgctggattatgaagaggacgaggagccccag
ggggccccagagagcgctgctccagtgggcaagaaggaggtgaagggctcgtatgtgtcc
atccacagctcgggcttcagagactttctgctcaagccagagctgctgagggccatcgtg
gactgcggttttgagcatccgtctgaagtgcagcacgagtgcatcccgcaggccatcctc
ggcatggatatcctgtgtcaggccaagtctggtatgggaaagaccgctgtgtttgtgctc
gctaccctacagcagatcgagccggtggatggacaggtgtcggtgctggtcatgtgtcac
acgcgtgagctggcgtttcagatcagtaaggagtacgagcgcttctccaagtacatgccc
acggtgaaggtggccgtgttcttcggtggcatgtctataaagaaggatgaggatatcctg
aagaagagttgccctcacatcgtggtgggcacgccgggacgaatcctcgccctggtccga
aacaaaaccctcaacctgaagaacgtcaagcacttcgttctggacgagtgtgacaagatg
ctggagcagctggatatgagacgtgacgttcaggacatcttcagactgacccctcacgag
aagcagtgcatgatgttcagcgccaccctcagcaaagagattcgacccgtctgccgcaag
ttcatgcaggacccgatggaggtgtttgtggacgatgagacgaagctgactcttcatggt
ctgcagcagtactactgcaaactgaaggacagcgagaagaaccgcaaactcttcgacctg
ctcgacgtgctggagttcaaccaggtggtgatattcgtaaagtctgttcagcgttgtgtg
gcactttcacagttactggtggagcagaacttccccgccatcgccatccacagaggaatg
gctcaggaagagaggttgtctcggtatcagcagttcaaagactttcagaggaggatccta
gtggccacaaatctgttcggacgaggaatggatattgagagggtcaacatcgccttcaac
tacgacatgccggaggactccgacacgtatctccacagggtggctcgtgcgggtcgcttc
ggcaccaagggtttggccatcacgtttgtgtcagatgagactgatgcaaagatcctgaac
gatgtgcaggaccgattcgaggtcaacgtggccgagttaccggaggagatcgacatttcc
acttacattgaacagtccagatga
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