Carassius auratus (goldfish): 113048820
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Entry
113048820 CDS
T07313
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
113048820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113048820
03036 Chromosome and associated proteins [BR:
caua03036
]
113048820
Transcription factors [BR:
caua03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
113048820
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
113048820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
113048820
NCBI-ProteinID:
XP_026066489
Ensembl:
ENSCARG00000050752
UniProt:
A0A6P6K2R7
LinkDB
All DBs
Position
30:complement(1946665..1967048)
Genome browser
AA seq
1739 aa
AA seq
DB search
MSAEVLRPGPVAGGGSKLGELIGKLHEYLAVATENQTEATLPGHWNGTTAKEYLEQQARA
QSSGLSEVGMLSSRSRRKPAVVTKHSGMNESDASSESGAEDVMSVHSSDPDTNALPKGTV
FLLPEPVGNEARDDFRGPEFRSRRIHKQHRDGGDRRRGGYELERVNCTACGQQVNHFQRD
SVYRHPMLNVLICKNCFKYYMSDDISKDSEGMDEQCRWCAEGGSLIGCDYCSNAFCKKCV
LRNLGRKELSTILEEERKWYCYVCSPEPLVELVLSCDAVLENLEQAQKRASRTEPNSVRG
RANKGGRGLMGPVPSAGLYQRMQRFVDVTTSLSHSFKAVVQSEREEEGNQEERIGQLRMF
RTVLDDLQAANSALQEALDHELTGSKRACGDTHKPKARSRKKKALSSQSLGLTKKLVVQL
TPVPVSPQPISRTSLPTHPSPERQTINREVTDGALEQRETMVEMEKGMEMEEMIERGEDV
ENDCVNNDEEEEDEEVEEDEDQTDPKNVSLSEENKRSPRVKTTPRRRRTNQSSTAEHAGS
AEDDSDSDEVPEVLLQTAAAMANSEEEGLVGSSWDGDEVNQQVRKQRLFGLVKTTPPDRG
SRKRNLKERSSSSSSSSSASSRRGSQNQGSSVRMTRGRARKVARVTEQSGSSSSEVGGQE
LESGPSSDSDDQRIKPLTDDVTLLGSGNFQQSSGDEMDIQPGPSLSVEDDDLENRIAKKI
LLAQIRANLSSASELDASSDEQSESTKEEQNKNKNNDRTSETTEEEDNDDSDCSESQSGS
RHRHRLLRHGLTLSEAEAKSQKQAVKKSKKREDLECVIVSSDESSETSVSSGVYDELSHS
ECEEIGSQSPTHDEKCQSPDRSSTADNNVSPTTEEHLRGTPRGRRQIRPLLEVGQLAKET
QSALKEEEERRRRLAEREKLRLENERREREDADSEVILVSEKPAQSFTPLVLEQDDVTHK
PVLQVHLHFLSKLKPHQQEGVRFMWDCCCESIQSVKTTPGSGCILAHCMGLGKTFQVIVF
LHTVLLCKELPLKRALVVCPLNTVLNWRSEFDQWQRGLRPNILWVAELATVKSVSVRVEL
LNDWFANGGVMIMGYEVFRILTHTDSAKYSKHKEAFRSMLLDPGPDLVVCDEGHVLRNAE
SSISKAMRALRTRRRIILTGTPLQNNLTEYHCMVNFIKENLLGSLKEFRNRFINPIQNGQ
CADSTPADVRLMKNRSHVLHQMMSGFIQRRDYSVLMSCLPPKHEYVLSVRMTHLQCRLYT
HYLQNYTGKGVGVNSLFQDLHVLSLIWTHPWCLKLAQLSRNKGKEEVPAPVFPGLGAGLV
GSSVNPNDSERRDATSTGLVGDGERNKDPVSLGSRSNQNPQHSDVTNTATTEISGGEAGF
VVGNRPPADWYMQFITAADAKVLEHSGKLQLLLEILHWAEKLQDKVLVFSQSLITLDLIE
SFLLYADESRGKTCCPYKGEKAWVKNKDYYRLDGNTSACARKRWAQEFNNTKNIRGRLFL
ISTRAGSLGINLVAANRVVVFDACWNPSYDIQSIFRVYRFGQKKTVYVYRFLAQGTMEQN
IYERQVAKQSLSSRVLDQQQIQRHFTHSQLNELYCFQPNLQPSKHTERPVDDLLAQMLQS
CGQLIVSYHEHNSLLDHREEEELSEEERRAAWDEYRAEKKASTQNSNEVTHRNANQALQQ
AMASLNFAYTTNSVPSTASLHVKPGNAEGSAAWVTYNNSNITFRLEHPNVVFSAPRTNT
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgaagttctcagacctgggcctgtggctggtggaggcagtaaactaggtgag
ctgatcgggaagctccatgagtatttggcagtagccacagaaaaccagactgaagcaact
ttacctggacactggaatggaaccacggccaaagaatacttggagcagcaggctcgcgcc
cagtccagtggcctctcagaagtgggaatgctgtcatctcgttcgagaaggaaaccggct
gttgtcaccaaacacagcgggatgaacgagtcggacgcttcatctgagagtggagcagaa
gatgtaatgtctgtgcactccagcgacccagacaccaacgcactgccaaaaggaacggtg
tttttgttgccggagccggtgggtaatgaagctcgtgatgatttccgtggtccagaattc
cgcagtagacgcattcacaagcagcacagagatggtggtgacagacgcagaggaggatat
gagttggagagggtgaactgcacagcgtgtggtcagcaggtgaatcatttccaacgtgac
tcagtctacaggcatccaatgctcaatgtcctcatctgcaagaattgttttaagtattat
atgagtgatgacatcagcaaagattcagagggaatggacgagcaatgcaggtggtgtgca
gaaggaggcagtctaattggctgtgattactgcagtaatgccttctgtaagaaatgtgtt
ctacgtaacctggggaggaaggagctgtccacaatcctggaggaggagaggaagtggtac
tgttatgtgtgcagtcccgagccattggtggagctggttttgtcctgtgatgcggttcta
gagaacctcgagcaggctcagaaacgagcctcccgtactgagccaaactcggtccggggc
agggctaataagggtggtcgtgggctgatgggcccagtgccctctgcaggcctttaccag
cgaatgcagcggtttgtagatgttaccacatctctgagccattccttcaaggcagttgtt
caaagtgaaagagaggaggaaggaaaccaagaagagagaattgggcagctaaggatgttc
cgcactgtgctggatgatctgcaagccgccaacagtgcattacaggaagccctagaccat
gagctgactgggtccaaacgtgcctgtggagacacacataaaccaaaagcgaggtccaga
aaaaaaaaggcattgtcatcacagagtctaggactcactaaaaagctggtggttcaactc
actcctgtaccggtcagcccacaacccatcagcagaacgagtcttcccactcatccatct
cctgagagacaaacgatcaaccgtgaggtgacagatggagcactggaacaaagagagaca
atggtagagatggagaaggggatggaaatggaggaaatgatagagagaggagaagatgtg
gaaaatgattgtgttaataatgacgaggaggaggaagatgaggaggtggaggaggatgag
gaccaaactgaccccaaaaatgtgtctttatcagaggagaataaacgttctccacgtgtg
aaaaccacaccacggcggcggcggacgaaccagagctccacggctgagcacgcaggttca
gctgaggatgactctgactctgacgaggtgcccgaagtgctgctccagaccgccgctgcc
atggcaaacagcgaggaagagggtttggttggtagcagttgggacggggacgaggtaaac
cagcaagtcagaaagcagcgtctctttggactggtaaaaacgacacctccggacagaggc
tctcgaaagcggaatctcaaagagagatcctcatcgtcttcatcgtcctcctctgcgtct
tcaaggaggggctcccagaaccaggggtcatctgtcagaatgaccaggggaagggcccgc
aaagttgccagggtgacagaacagagcgggagttcgtcaagtgaggtgggaggacaggaa
ctggagagtgggccgagcagcgactctgacgatcagaggatcaagccgctgacagatgac
gtcacgttgctgggctctggaaatttccagcagtcttctggtgatgagatggacatccag
ccaggtccgtctttatctgtggaggacgatgatttagaaaatagaattgcaaagaagatt
ctgctggctcagatcagagctaacctctcctccgcatctgagctggacgccagctccgat
gagcaatcagagagcacaaaagaagagcagaacaagaacaagaacaatgacagaacctca
gagacgactgaagaggaagataacgatgactccgattgcagcgagtctcagtcagggtca
cggcaccgccaccgattgctgcgacatggtcttaccttatcagaggctgaagcaaaaagt
caaaagcaagcggtaaagaaatctaagaaaagagaagatttagaatgtgttattgtgagt
agtgatgaatcgagcgaaacgagtgtatcgagcggcgtttatgatgaactcagccattca
gagtgtgaggaaatcgggtcccagtcgcccactcatgatgagaagtgtcagagtcctgac
aggagcagcactgctgataataatgtctctccaaccactgaggagcatttgaggggcacc
ccgcgagggcggaggcagatcagaccgcttctggaggtgggtcagctggccaaggagaca
cagagtgctctgaaagaagaggaggagcgcaggaggagattagcagagagagagaaactg
agactagaaaatgagaggagagaacgagaagacgcagactccgaggtcatattagtgtct
gagaaaccagctcaaagcttcacaccattggttctcgagcaagatgatgtaacacataaa
cctgtgctgcaagtgcacttgcactttctgagcaaactcaaaccacaccaacaagagggt
gtgcgcttcatgtgggactgctgctgtgagtccattcagagtgtgaagactactccaggc
tctggctgtattctggcccactgcatgggtctgggaaagacctttcaggtcattgtgttc
cttcacacagtgctgctatgtaaagagctgccactgaaaagggctctggtggtgtgtcct
ctcaacacagtgctgaactggaggagtgagtttgaccagtggcagaggggcttgaggccc
aacatactgtgggtggcagagctggccacggtgaagtctgtgagtgttcgtgttgagctt
ttgaatgactggtttgcgaatggtggtgtgatgatcatgggctatgaggtttttcgtata
ctgacacacacagatagcgcgaaatacagcaaacacaaagaagccttccgctcaatgctc
ctggatccaggccctgatctggtggtgtgtgacgagggtcatgtccttaggaacgcagaa
tccagcatctcaaaagccatgcgagctctacgtacacgtaggagaatcatattgacagga
acaccgcttcaaaacaaccttactgagtatcactgcatggtgaacttcattaaggagaac
ctgctgggttctctaaaggagttccggaaccgttttattaatccgattcagaacggtcag
tgcgcagactccacccctgctgatgtcagactgatgaagaatagatcgcacgtcctccat
cagatgatgtcaggattcatacagagacgagactattcggtcttgatgtcctgtttgccg
ccaaaacacgagtatgtgctgtcagtccggatgacgcatctgcagtgtcgattatacaca
cactacctgcagaactacacagggaaaggagtaggtgtgaacagtttgtttcaggacctt
catgttctgagtttgatatggactcatccctggtgtcttaaacttgctcagctgagcagg
aataagggcaaagaggaagtgcctgctcctgtcttcccaggtctgggtgcaggtttagtc
ggcagttctgtaaatccaaatgactctgaaaggagagatgcaacaagcacaggtttagtg
ggtgatggagagagaaataaggatccagtttccttgggcagcaggtccaatcaaaatcca
cagcattcagatgtcacaaacacagccacaaccgaaatttctggtggggaagctggattt
gttgtgggtaacaggccacctgccgactggtatatgcagtttataacagcggctgatgcc
aaagtgctggagcattctgggaaattgcagttgctactggagattttacactgggcagag
aaactacaggacaaagtgttggtgttcagtcagtctctgataacgctggatcttattgag
agtttcctcctgtatgcagatgagagcagggggaaaacatgttgtccgtacaaaggagag
aaagcatgggttaaaaataaagattattatcgcttggacggcaacaccagtgcttgtgct
cgcaagagatgggctcaagagtttaacaacactaaaaacataagaggaagattgtttctg
atctctactcgtgctgggtcactgggaatcaatctggtcgctgcaaaccgggtcgtggtg
tttgacgcttgctggaatccgtcttatgacatccagagcatcttcagagtctatcgcttt
gggcagaaaaaaactgtatatgtgtaccgctttctggcccaggggaccatggaacagaac
atttatgagcggcaagttgctaaacagtcactgtcctctcgtgttctggaccagcagcag
attcagagacacttcacacacagtcagctgaatgagttgtactgcttccagccaaacctg
cagcccagtaaacacacagaaaggcctgtggatgacctgttggctcagatgctgcagagc
tgtgggcagctcatagtaagttatcatgagcacaactcattgttagaccaccgggaggaa
gaggagctgagcgaggaagagcgcagagcagcctgggatgaataccgtgcagaaaagaag
gcctctacacagaactctaatgaagtcacccacagaaacgccaaccaggcactacagcag
gctatggcttctctaaacttcgcctatacaaccaacagtgttccttcaactgcttcattg
catgtgaaaccaggcaatgccgaaggttctgctgcttgggtcacttacaacaactccaat
atcacatttcgactggagcatcccaatgtggttttctccgctccaagaacaaacacataa
DBGET
integrated database retrieval system
