Carassius auratus (goldfish): 113048855
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Entry
113048855 CDS
T07313
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113048855
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
113048855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
KH_N4BP1_1st
UBA_N4BP1_C
zf-CCCH_4
TNFR_ELAPOR1_6th
zf-CCCH_2
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
113048855
NCBI-ProteinID:
XP_026066542
Ensembl:
ENSCARG00000065110
UniProt:
A0A6P6K615
LinkDB
All DBs
Position
30:complement(2460639..2474589)
Genome browser
AA seq
1008 aa
AA seq
DB search
MVLELVAPASAGPALQRCIQHIQRVFRVRVSCSTAESSCESPNAGSCIIVNIEDGKEEDC
TKAKEYIVSLISPVHKHRERLTLWLQRRLHALRAAIEYESCAVVQVRDHALELQGGHAQV
TAACAMLQRLKMEHRGCREPQALPAATGHDSPEEEDEEDDEEAREDGSSSESDGEARSRS
RSSGGVVSTAGSEEGLTGKRQDQLTATKPHRQLCRSSCLDRPSFSQSSILQELRADDTQR
AQMPLRQTSDRDYQTKMDFALKLGYSGEQVESVLSKLGSSALINDVLAELVRLGNKGDPE
SQTAAGTAGLTPRAMGAKETVSHETSLEEDASDTYDNLRPIVIDGSNVAMSHGNKDVFSC
LGIQLAVDWFLEKGHKDITVFVPAWRKEQSRPDAPIKDQEILRKLEKEKILVFTPSRRVQ
GRRVVCYDDRFIVKLACDSDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPP
DDPLGRHGPSLENFLRKRPVVPEHKKQPCPYGQYSKSKKCTYGHKCKYYHPERANQPLRA
VADELRAFAKLSAVKTMSEGALAKCGISGSANKGDSSSEAKRVAPKRQSDPSIRSVACEQ
EERLCPARKAEANSVPSLVSALSVPTMPLTKSHAAGALNTRSASSPVPGSLHFTHSSLEH
AGSIQYPPILVTNSQGASVAYGEPFPKYDSVVSDHGYYSMLSDFSTISLQDSFCSLEQPE
PVGVGGGYPGRASMCPEPGRSHSSDSYSSYSGEMYLNSLEGSLDDSMKGPPSQTQTQPSA
QTRLQAFAHGFHHEALTRVQSYGTDEPKPGPRKQPSAHLAPHSQHSVVGARSSCPGDYPP
VSQNMLPSASPSQQGRSLGMTRMDSISDSRLYESNPLRQRRPPLCREQHASWDPLPCGNE
PYSYGSYGLTGGLMPCYERVMVRSMPEKMEQIWRSPWDSVPPPPFSARGPAEEPQERHPI
PEHQYQTYRNLCNIFPAYVVHLVMEENPHMTDPQQLAAVIVTKLRTCH
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggttttggagctcgtcgcgcccgccagtgcaggccctgcgctccagcgctgcatccag
cacatccagcgggttttccgggtcagagtgagctgcagcaccgccgagtccagctgcgag
agccccaacgccggctcctgtatcatcgtaaacatcgaggacggcaaggaagaagactgc
actaaagctaaagagtacattgtgtcgctgatcagtccagtgcataagcaccgtgagcgt
ttgactctttggctgcagcggcgactgcatgccctgcgtgcagctattgagtacgagagc
tgtgccgtggtgcaggtgagggaccatgcactggagcttcagggaggtcatgcacaggta
acagctgcatgcgccatgctgcagcgcctgaagatggagcaccgcggctgccgagaaccc
caggccttgcccgctgccaccggccatgactctccagaagaagaggatgaggaggatgat
gaagaagccagggaagatgggagcagttctgagagtgatggtgaggcacggtcacggagc
aggagttctggaggcgttgtcagcacggcggggtcagaagaaggattgaccggaaagagg
caggaccaactcacagctaccaaacctcaccggcagctgtgtcgctcatcctgtttggac
cgtcccagcttcagccagagcagcatcttacaggagttgcgcgcagatgacacccagaga
gcccaaatgcccttgcgtcaaaccagcgatcgagattaccaaaccaaaatggactttgct
ctgaaactgggctactccggagagcaggtggagtctgtgctgagtaaactggggtccagt
gcactaatcaatgatgtattggccgagctggtacgcttagggaataaaggagatccagag
agccagacagcagcgggcactgcaggtttaacaccacgggcgatgggtgccaaagaaacc
gtcagccatgaaacatcgctggaggaagacgcatcagacacatatgacaacctcagacca
attgtgattgatggatccaatgttgccatgagccatggaaacaaagatgtgttctcatgc
ctgggcattcagctggctgttgattggttcctggagaaaggccacaaagacatcacagtt
ttcgtcccagcatggaggaaagagcagtcaagacctgatgcgccaatcaaagatcaggag
atcctacggaaattagagaaggaaaagatcctcgtcttcacgccgtctcgcagagtccaa
ggacgacgagtggtttgctacgacgaccgttttatcgtcaagctggcctgcgactcagac
gggatcatcgtgtccaacgacaactaccgagacttgcagaatgagaaaccagagtggaag
aaatttattgaggaacgactcctcatgtacagcttcgtcaacgacaagtttatgcctcct
gatgatcctttaggcagacatggacctagtcttgaaaattttctccgcaaacgaccagtg
gttccagagcacaagaagcagccgtgtccttatggtcagtacagcaaaagtaagaagtgc
acgtacggccataaatgcaagtactaccacccagaaagagccaaccaaccactgcgggct
gttgctgacgagctcagagcctttgccaaactctccgctgtaaaaacaatgagtgagggg
gcacttgccaaatgtgggatctctggttctgctaacaagggggacagtagctccgaggca
aagcgagtggcacccaagcgccagtctgaccctagtatccggtcggttgcatgtgagcaa
gaagagagactctgtccagcgcggaaggcagaggccaattctgtaccatcgttagtttca
gcacttagcgttccaactatgccactgacgaaaagtcatgcggcaggcgccctgaacaca
cgctcggcgagcagccctgttccagggtctctgcactttacccacagctcgctcgagcat
gcgggcagcattcaatatccccccatcctagtcaccaatagtcagggcgcctccgtggct
tatggtgagccgttccccaagtacgactctgtggtaagcgaccacggatactattccatg
ctcagtgacttctccaccatcagcctccaagacagtttctgcagtcttgaacagccagag
cctgtaggggtgggtggaggatatcctggtagagccagcatgtgccctgagcccggccga
agtcattcgtcagactcctattcgtcctacagtggagagatgtacctcaactcattggag
ggcagcctggatgacagcatgaaagggccaccgtctcagacccagactcaaccttcggcg
caaacacgccttcaagcctttgcacacggtttccaccatgaggccttgactcgtgtgcag
agctacggaacagatgaacccaaaccgggacctcgaaagcagccctccgcccaccttgca
ccacactcccaacactcggtcgtcggtgcccgatccagctgcccaggagactaccctcct
gtgtcccagaacatgttgccttccgccagcccttcccagcagggtcggtccttaggcatg
actcgaatggacagcatatctgactcacggctctacgagagcaatccgctgcgccagcgg
agacctcctctttgtcgagagcagcatgccagctgggaccctttgccgtgtggtaacgag
ccctacagttacggaagctacggattaacgggaggcctcatgccttgctatgaaagggtg
atggtccgcagcatgcccgagaagatggagcagatttggaggtccccgtgggatagtgtg
ccgcctccaccgttcagtgctcgtgggccagcggaggaaccccaagagcggcaccctatt
ccagaacaccagtatcaaacctaccgaaacctctgtaacatcttcccggcatatgtggtc
catttggtcatggaggagaaccctcacatgaccgatccccagcagctggctgccgtcatc
gtcactaaactgcgcacttgccactaa
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