Carassius auratus (goldfish): 113049143
Help
Entry
113049143 CDS
T07313
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113049143
Spliceosome [BR:
caua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113049143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
113049143
NCBI-ProteinID:
XP_026066993
Ensembl:
ENSCARG00000069515
UniProt:
A0A6P6K440
LinkDB
All DBs
Position
30:complement(9904354..9919004)
Genome browser
AA seq
1070 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDVKMATGNYFGFTHGAAAAQYSQQPAPGVAYTHPTTVASYT
VHQAPVAAHTVAAAYAPTAATVAVARPAPVAVAAAANAGAYGGYQPAHAAADYGYAQRPP
EVPPPPPPVTSQNYQDSYSYVRSTAPAVAYDSKQYYQQPAATPAVAAAAAQPQPTVAESY
YQTAPKTGYSQGATPYTQTQQTRQVTAIKPATPRPATSTFSIYPVSSAVQPVAAAAASVV
PSYSQSPTYSTNAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQQKQAAVAAAATAAWTGS
TFTKKAPLQNKTLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKLSQ
SSSSSSGGGNSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPST
EPSVVSQSSTSSTAAPNKTASSNISSSTSTSSSLSVSASYLKSGNMVNNMAASAAQGKSP
VPNSTSVKKVNTPKINFVGGNKLQTTAVKNDESKIEAAKTAQSGLSAQPMDLKNEMPDPL
SPQSALAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRL
QYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDMYW
RRMEEEQHHWDERRRMPDGSYPQGPPGPPGLLGVRPGMPIPQPQGPVPPRRPDSSDDRYV
MTKHAAIYPSEDELQAIQKIVSITERALKLVSDIITDQDASAKGKEEDKEKKEPPQDRVL
KGVMRVGVLAKGLLLSGDKNVNLVLLCSEKPTKNLLTRIVEHLPKQLTMVTPEKYEVKGS
VQEAAIILTSSADPKMQVTITLTSPVIREENTRDGDVTSSMVKDPADVLDRQKCLDALAA
LRHAKWFQARANGLQSCVIVIRILRDLCQRVPTWSAFPSWAMELLVEKAISSASGPMSPG
DALRRVFECISSGILLSGAPGLIDPCEKNPTDTLATMEEQQREDITSSAQFALRLLAFRQ
IHKVLGMDPLPQMNSRFNVRNNRKRRRDNSDGTDGFEAEGKKDKKDYEGF
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtccagtagtctccttcacctatgtgcccagccggctaggtgaagat
gtcaaaatggccaccggcaactactttggatttacccatggtgctgccgcggcccagtac
agtcagcagccggcccctggggtagcatacacccaccccactacagtggccagctatact
gtgcaccaagcacctgtagcggcacacacggtggcagcagcctacgcccctacagccgcc
acggttgctgttgctaggcctgccccggtggcagtagcagcagcggctaatgctggcgct
tatggaggataccagccagcccacgctgccgcagattatgggtacgcacagagaccgccg
gaggtacccccaccaccgcctcctgttacctcgcaaaactaccaggactcctattcatat
gtgcggtccacagctccggctgtagcctacgacagtaaacaatactaccagcaacctgca
gctacaccagctgtagccgctgcagcagcccagccacaacccactgtggccgaatcctac
tatcagacagccccaaaaactggatacagccaaggcgccactccgtacacccagacccag
caaacacgtcaggttacagccataaagccagccacccctagacctgccacctcaaccttc
tccatttacccagtgtcctctgctgtacagccggtcgcagctgcggccgcctctgtagtc
ccgtcatactcccagagtcccacctacagcaccaatgcagtcacatactctggaacgtca
tactctggctatgaagctgcagtgtattcagctgcctcttcctactatcagcagcagcag
caacagcagcagaaacaggcggccgtcgccgcagcagccactgccgcgtggacaggcagc
acttttacaaagaaagctcctttgcagaacaaaacactcaaacctaaacagccccctaaa
ccaccacagatacactactgtgatgtctgcaagatcagctgtgctggaccccagacctat
aaggagcatctggagggtcagaagcacaaaaagaaggaagctgcattgaagctgtcacag
agcagcagtagcagcagcggaggcgggaactctgcccgcggcacacagaatcagctacgc
tgtgagctctgtgacgtctcctgtactggagctgatgcctacgccgcgcacatcagagga
gccaaacaccagaaggttgtgaaattgcataccaaactaggaaagccaataccatccaca
gagcccagtgttgtttcccaatcctccacctccagtacagctgctcctaataaaactgcc
agctccaacatcagcagctccacaagcacatcatccagtctctctgtttctgcctcttac
ttaaaatctggcaatatggtcaacaacatggcagcttcagctgcacagggcaagagccca
gtgcccaacagcacctctgtcaagaaggtcaacacacccaagatcaactttgttggtgga
aacaagttacagaccactgcagttaaaaatgatgaatccaagattgaggcagctaaaacg
gcacagtccggattgtcggcacaaccaatggacctaaagaatgaaatgcctgaccccctg
tcacctcaatcagcacttgcagccctgcagagtgatgttcagcctgtcggacatgactat
gtcgaagaggtaaggaatgatgaaggaaaggttatccggttccactgcaaactgtgtgaa
tgcagtttcaatgacccgaatgccaaagaaatgcatttgaaaggaaggagacatcgacta
cagtataagaaaaaggtgaacccagatctccaggtggaagtgaaacctagcatccgagcc
aggaaaatccaagaggaaaagatgaggaagcagatgcaaaaggaagagtactggagaaga
cgtgaagaggaggagcgctggaggatggagatgaggcgctatgaagaggacatgtattgg
cgacgcatggaggaagagcagcaccactgggacgaaaggcgcagaatgcctgatggaagt
tatccacagggtccacctgggcctcctggtcttcttggagtgaggcctgggatgcccatt
cctcaaccacaaggaccagtgcctccacgtcgccctgattcctcagatgatcgctatgtg
atgaccaaacatgcagctatttacccatctgaagatgagctccaggccatccagaagatc
gtatcaatcactgaacgagctcttaagctagtctctgacatcatcacagaccaggatgca
agtgcaaagggcaaagaagaggacaaagaaaagaaagagcctccccaagatagagtgctg
aagggagtgatgcgggtaggcgttctagccaaaggtctgcttctaagtggagacaaaaat
gtcaatctggtcctcctctgttccgagaagccgaccaagaatcttctaacacgcattgtg
gaacatcttcccaaacagctcacgatggtaactccggagaaatatgaggtaaaaggttcc
gtccaagaggctgccattatccttacctcctctgctgaccccaagatgcaggtgaccatc
accctcacctcgcctgtcatccgagaggaaaacacccgggatggagatgtaacctcgagt
atggtgaaagacccagcggacgtcttggacaggcaaaaatgccttgacgctctggctgcc
ctacgccacgctaagtggttccaggctagggctaatggactccagtcatgtgtgattgtc
attcgaatactgcgtgacctttgtcagcgagtaccaacctggtctgcctttcctagctgg
gctatggagctgctggtggagaaggctatcagcagtgcctctggaccaatgagccctgga
gatgctcttcgaagagtctttgaatgtatttcctcaggcattctgctgtctggtgcgcca
ggattgatagacccctgtgagaagaatccaacagatacactggctaccatggaagagcag
cagagagaggacattacgtcaagtgctcagtttgccttgaggctgctggcgttccgtcag
attcacaaggttctgggtatggaccccttgccccagatgaactcgcgtttcaacgtacgg
aataaccgcaagaggcgacgtgacaacagcgatgggaccgatggatttgaagctgaaggg
aagaaagacaagaaggactacgaggggttctga
DBGET
integrated database retrieval system
