KEGG   Carassius auratus (goldfish): 113049156
Entry
113049156         CDS       T07313                                 
Name
(RefSeq) ataxin-2-like isoform X1
  KO
K23625  ataxin 2/2L
Organism
caua  Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:caua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caua03019]
    113049156
Messenger RNA biogenesis [BR:caua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     113049156
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 113049156
NCBI-ProteinID: XP_026067017
Ensembl: ENSCARG00000069843
UniProt: A0A6P6K7H3
LinkDB
Position
30:complement(10187876..10209309)
AA seq 1099 aa
MSMKPQAGGNRKPGGSNSGAAAASGTGGAGGGVGRQNVGRGRNNAKGPSTAVALSGVYAN
MRMVHVLTSVVGTKCELKVKNGLIYEGVFKTYGPECDIVLDAAHRKSVEPNVSPRREDIV
ESIIFKSSDVVVVHFKDVDLNYAKKVSSDADNFTDSAVSARLNGEHKEKDLEPWDGGEQH
ILGSMESLDTDLSNGWDPDEMFKYNEETYGVKSTYDSSLSSYTVPLERDNSEEFLKREAR
ASQLAEEIEASATYKARVALENDDRSEEEKYTAVVRGERELHSLNRENKYIPPSQRNREP
GMSWGAGRQNSPRMVQCSPGPPPPRSGPHDYNAMDQRVVNGGAHPWPSRCPSPSSRPPSR
YQSGPTNSLPPRVATPTRPPSRPPSRPSRPLSHPSAHGSTGPLSIMPKRLSSEGPPRMSP
KSQRTPRPHRVASCRGGDYMSQGASVDVSAPPPTRNSPSGGTWSSVVSGAHRPRSPRQNS
IGGGAPSPSCLSSPQAGTVPVDSVTASTAATSPTAANPATNLEASTIEEAKESRVLEMRQ
NSPNANKENVKPIEASASIARSVGKGPPSMALDQRKQIDNLKKFSVEFRLQSCSNPDAVF
EPMMAKTPRDLVEKPKDQAAEKSTVDSTGPKVPMESSISEETSTSVSGGPTGNKSGTPSL
SPSSAVPEQKRGPDVMSQGFQTSSSLANAAAKDQEEKEEKNDPVAESVRKSTLNPNAKEF
NPRIFCSPPKPATTPTQTRPQGQPSPSIVVQQPPAVYGQTMFQMYPLTPVSPGVQKSIIW
KPPAMYHVQVPHMTMSQTKPYRPGKVPNMPQQRPDQHHPPGTSTMMHPATAAGPPIVAPS
PAYSTQYFTCSPQQFASQPLVQQMPHYQSQAQHVFSPMIQSGARMITPPGHAQPSLVSSS
TTQYGEQTHTMYVSPTPIPQQFPHPGSTFHPHPQHPQPSATPTGQPQQGTQHGGSHPAPS
PVQHSQHQAAAQAIHLGNPPQQQMYSALAPTPPSMTPGPNPQSPQGSYPSAQQAVYIHPQ
QMQHGYNPNHMAHVQQAHMQSGMVPPHHGTPSHPPTMMLMATQAPAGPQPGALNPIPVSS
ATHYSYTLTPVQGHHPQQL
NT seq 3300 nt   +upstreamnt  +downstreamnt
atgtccatgaagccgcaggccggtggtaatcgcaaacccggcggaagcaacagcggagcc
gccgcggcctccggtaccgggggagcaggaggaggcgtcggacgccagaacgtcggaaga
ggacgcaacaatgccaaaggaccctccactgcagtggccctcagtggagtttatgcaaac
atgaggatggttcatgttttaacctcagttgtgggtaccaaatgtgaacttaaagttaaa
aatggtctgatctatgaaggagtttttaagacctatggcccagagtgtgacattgtcctg
gatgctgcacacaggaagagtgtagaacctaatgtgagccctcgccgtgaggatattgtg
gagagcatcatcttcaagtcctcagatgttgtggtagttcatttcaaagatgtggacctc
aactatgccaagaaagtttcatcagatgcagacaacttcacagacagtgcagtaagtgcc
cgtctgaatggagagcacaaagagaaggatctggaaccctgggatggaggggagcagcac
atcttgggcagcatggaatctcttgacactgatctgtcaaatggctgggatcctgatgag
atgtttaaatacaatgaggagacatacggtgtgaagtccacctatgacagcagcttgtcc
tcgtacacggttcctttggagcgagacaattctgaggagttcctcaagcgggaggctcgt
gcatcccagctggcggaggagatcgaagccagtgccacctataaggcccgcgtggctctg
gaaaacgacgaccgctctgaagaagagaaatacactgctgtggttcgtggagagagggag
cttcacagcctcaacagggagaacaaatacattccccctagtcagaggaacagagaacca
gggatgtcatggggagctggtcgtcagaactcacccagaatggtgcagtgcagccctggg
ccacccccacccagatctggacctcatgactacaacgcaatggatcaacgcgtggtcaat
ggaggtgcacacccttggccctcacgctgcccatctccctcctctcgccctccatcccgt
taccagtcaggccccaccaactctctcccgccccgggtggccacgcccacccggcctcct
tccagacccccatccaggccctctcggcccctgtctcacccctctgctcatggctctaca
gggcccctgtccatcatgcccaaacgcctgtcctcagaaggtcctccaagaatgtctccg
aagtcacagcgcactcctagacctcatagagtggcctcttgtcggggcggtgattatatg
tcccagggtgcatcggtggatgtttccgctccccctcctactcgcaacagtccttctggg
ggaacctggtcatctgttgtcagcggtgcacacagacctcgatcacctcgacaaaatagc
attggtggaggtgctccaagcccctcctgcttgtcttcccctcaggctggtacagtgcca
gtagactctgtgacagcttccacagcagcgacgtcacccacagcagccaatccggctacc
aacctggaagcatctacaattgaagaggccaaagaatcaagagtactagagatgagacag
aattctcccaatgccaacaaggagaatgtgaaacctatcgaagcttctgcaagcatcgcc
cgatccgtcggaaagggacctccaagcatggctctggaccagaggaaacaaatagataat
ttaaagaaattcagtgtagagtttaggttgcagtcttgctcaaatccagatgcagttttt
gagcctatgatggccaagactccacgggacctcgtagaaaagccaaaggatcaagcagct
gagaagagcacagtagattcaacaggacctaaagtccccatggagtcctccattagtgaa
gaaacctccacttctgtgagcggcggcccaacaggaaataaatctggtaccccttctctt
tctccttcctctgctgtacctgagcagaaacgagggcctgatgtgatgtctcagggcttt
caaacctcctcgtctctggccaatgctgctgcaaaagaccaggaggagaaggaggagaag
aatgaccctgtagcagagagtgttcgaaaatctactctcaatcccaatgccaaggagttc
aacccaaggatattttgttcccctcctaaaccagcaacaacccccactcaaacccggccc
cagggtcagccgagcccttccatagtagtgcagcagccccctgccgtctatggtcagacc
atgttccagatgtaccctctgacgcctgtcagtcctggcgttcagaaaagcattatctgg
aagcctccagccatgtaccatgttcaggttcctcacatgaccatgagccagaccaagccc
tacagaccaggtaaagtaccaaacatgccacagcagagaccggaccagcatcacccacct
ggcacgtctacaatgatgcatccagctacagctgctgggccgcccatcgtggcaccgagc
ccagcctactccacccaatacttcacttgtagcccccagcagtttgctagccaacctctg
gtacaacagatgccccactaccagtcacaggcccagcatgtgttcagtccaatgatccag
agcggtgcgaggatgatcacccctcctggccatgctcagcccagcctggtttcctcctcc
accactcagtatggtgagcagacgcacactatgtatgtgtcacctacccccattcctcag
cagtttccccacccaggctctacttttcaccctcatccgcagcaccctcagccctctgcc
accccgacaggacaaccgcagcagggtactcagcatggaggcagccacccggcccccagc
cccgttcagcattctcagcaccaagcggcagcccaagccatccatctgggaaacccacca
cagcagcagatgtactcagccctggcacccaccccaccctccatgacccccggccccaac
cctcagtctcctcaaggcagttacccctccgctcagcaggctgtctacatccacccccaa
cagatgcagcatgggtataaccctaaccatatggctcatgtgcagcaggcccacatgcag
tcagggatggtgcctccccatcatggcactccttcccacccccccacgatgatgttgatg
gccacacaggctcctgctggcccccagcctggtgctctcaaccccatccctgtgtcctcc
gccacacactactcctacactctcacccctgtgcaaggtcaccatccgcagcagctgtag

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