Carassius auratus (goldfish): 113049303
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Entry
113049303 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113049303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113049303
03019 Messenger RNA biogenesis [BR:
caua03019
]
113049303
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113049303
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113049303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCHC_3
PMBR
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
113049303
NCBI-ProteinID:
XP_026067312
Ensembl:
ENSCARG00000036711
UniProt:
A0A6P6K8A4
LinkDB
All DBs
Position
3:complement(18263895..18265969)
Genome browser
AA seq
268 aa
AA seq
DB search
MQELIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFMRAACIKGGMCPFRHI
SGEKSVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKSCKFMHPRFELPMGATEQPP
LPQQAQSQQKQQNTQPTNRSSQSLIQLTNTYVNNNQRMPNSVGIVHSNNMGGTRGPRPLD
QVTCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaattaatcgcgagtgtcgatcatatcaagtttgatctagaaattgctgtagaa
caacagttaggcgctcagccactgccttttccaggaatggacaagtctggcgcagctgtg
tgcgagttcttcatgagagctgcttgtattaaaggtggaatgtgtcctttcagacacatc
agtggagaaaagagcgtggtgtgcaagcactggctgaggggcttatgcaagaaaggagac
caatgtgaatttttacacgagtatgacatgacaaagatgcctgaatgttatttctactct
aaatttggggagtgcagtaataaagagtgtccatttttgcacattgacccagaatctaag
attaaagattgcccatggtacgacaggggtttttgcaagcacggtccggattgcaggcac
agacacacaagaagagtcatctgtgtaaattaccttgttggcttctgtccagagggcaag
tcatgcaaatttatgcacccaagatttgaactccctatgggtgcaactgaacagccaccc
ttaccacaacaggcacagtctcagcaaaagcagcaaaacacacagcccacaaacaggtca
tcacagtcactcatccagttaaccaacacatatgtcaacaacaaccagagaatgccaaat
tctgttgggattgtgcactctaacaacatgggtggaactcgtggccctcgtccacttgat
caagttacgtgttacaagtgcggtgagaagggccattacgcaaataaatgcacaaaagga
cacctggcatttttgagtggacagtaa
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integrated database retrieval system
