Carassius auratus (goldfish): 113049498
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Entry
113049498 CDS
T07313
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113049498 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113049498 (exosc6)
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113049498 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
113049498
NCBI-ProteinID:
XP_026067679
Ensembl:
ENSCARG00000006484
UniProt:
A0A6P6K609
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All DBs
Position
30:complement(18353697..18354789)
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AA seq
282 aa
AA seq
DB search
MPVDTKRIRGPEESQSPLFFLSPDKAPKASSRQGVRGNGEVRPMFARCGLISQAKGSAYL
EAGNTKIICSVYGPREIERKDETDMKSGRLVCDFRLAPFSCSKRGAWIQGSEERDLSQTL
LESLQPGVCLHRYPRSQIEVNVMVLENDGSILAHAVTCASMALADGGIEMYDVVLGCTLR
QNGNTCLVDPSYSEECGSWQEGYGENQGCVTVALLPNLNQVSGLNADGEMREDTLADAVR
TCMDGCHKLYPVLQQAVTRAVKKKAPPPEKYTFTCHSPQVLF
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgacacaaaacgtatccgtggaccggaggaatcgcagtccccgcttttcttt
ctttctccagacaaagctcccaaggccagcagcaggcaaggcgtccgggggaacggagag
gtgcggccgatgtttgcgcgatgcgggctgattagccaggctaagggctccgcttacctc
gaggctggaaacaccaagattatatgctcggtgtacgggccgagagaaattgaacgcaag
gacgaaacagacatgaaatccggacgccttgtttgcgactttaggctcgcgccgttttca
tgttcgaagcggggtgcctggatccaaggcagtgaggaaagagatctgtcccagactcta
ctggagagcttgcagccaggggtttgcctacacagatacccgcgctctcagatcgaggtt
aatgtcatggttctggagaacgacggctcgatcctcgcgcacgcggtgacatgcgcctcc
atggccctggcggatggcggtattgagatgtatgatgtggtgctgggttgtacgctgcgg
cagaatggaaacacgtgtctcgttgacccttcatactcagaggagtgtgggagctggcag
gagggttacggggagaaccagggatgtgtcaccgtggctctgcttcccaatctgaatcaa
gtgtctggtctgaacgcggacggagagatgcgggaagacacactggccgatgctgtgaga
acctgcatggatggctgtcacaaactctatccggtgctacagcaagctgtgacgcgggct
gtcaagaagaaagctcctccacccgaaaaatatacttttacttgccacagtcctcaagtt
ttgttttga
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