Carassius auratus (goldfish): 113049512
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Entry
113049512 CDS
T07313
Name
(RefSeq) nuclear receptor ROR-alpha-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113049512
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
caua03310
]
113049512
Transcription factors [BR:
caua03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
113049512
Nuclear receptors [BR:
caua03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
113049512
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Hera_RBD
Motif
Other DBs
NCBI-GeneID:
113049512
NCBI-ProteinID:
XP_026067702
Ensembl:
ENSCARG00000007313
UniProt:
A0A6P6K9D7
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All DBs
Position
30:complement(18534312..18575157)
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AA seq
528 aa
AA seq
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MNMESPPESVASPSKSASEADASVEDSPVKLDSKPEPDKPAPVRRQSCSSTNRDVSSAKK
THTSQIESIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQGTVSYSCPRQKSCLIDRTSR
NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLFAEVQKHRQQQQEEKVGDDTEKGREP
QPPGEAEPLTPSYALSTNGLTELTDDLSGYVSGQTPEQGKVDSATGGFYLDIQPSPDQSG
LDMDDIKLEPVCDLSSDSGLDQYCCYSNGDTSPPDNDLEHLSENICKSHMETCQYLREEL
QPSSWQTVLQTDLDAYQKKSQEDMWQLCAVKVTEAVQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFVRMCRAYNSQNNTVFFDSKYAGPEVFKALGCDDLISSVFEFAKSLNSLQL
SEDEIGLFSAYVLMSADRSWLQEKTRVEKLQQKIKIALQNLLQKNQRDEGILTKLVCKVS
TVRMLCRRHMEKLSTFRALYPETVHTRFPPLYKELFGSDFEQVLPQEA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggagtctccgccagagtcggtcgcgtcgccgagcaagagcgcttctgaagcg
gacgcttcggtggaggacagcccggtgaaactggacagcaagcctgagcccgacaaacca
gccccagttcggcggcagagttgctcaagtaccaacagggatgtgtcctcagcaaagaaa
acacacacatcccagatagagagtattccctgtaaaatctgtggagataaatcatcaggg
attcattatggtgttatcacatgtgagggatgcaagggtttcttcaggaggagtcagcag
ggcactgtgtcatattcgtgtcctcggcagaagagctgtctgatcgaccgtaccagcaga
aaccgctgccagcactgtcgcctgcagaaatgcttagcagtgggcatgtcaagagatgct
gtaaaattcggccggatgtctaagaaacagagggacagtctgttcgcagaggttcagaaa
caccgtcaacagcagcaggaggagaaagtgggtgatgacacagagaaggggcgggaacct
caacctccaggagaggcggagccactcacgccctcttacgccctgtccaccaatggtctc
acagagctcaccgatgacctcagtggatacgtgagcggtcagaccccagagcagggaaag
gtggattcagcgactggtggattttaccttgacattcagccctctccagaccagtcaggt
ctagacatggatgacattaaactagaacctgtgtgcgacctcagctcggactctggctta
gatcaatattgttgctatagcaatggagacacttcacctcctgacaatgacctagaacat
ctgtcagagaacatctgcaagtctcacatggagacgtgccagtatcttcgagaagagcta
cagcccagcagctggcagacagtcttacagaccgacctggatgcgtaccaaaagaagtct
caggaggacatgtggcagctgtgtgcagttaaagtcactgaagctgtgcagtatgtggtt
gagtttgccaagcgcattgatggattcatggagctctgtcagaacgatcagatcgtgctg
ctcaaagcaggttctttagaagtcgtgttcgtgaggatgtgtcgggcatataactcccag
aacaacactgtcttttttgacagcaaatatgctgggccggaggtcttcaaagcattgggc
tgtgatgatcttatcagctctgtgtttgagtttgcgaagagcctgaactctctacagctc
agtgaagatgagatcggcctgttttcagcatacgtgctgatgtctgcagatcgctcctgg
ctccaggagaagaccagagtggagaaactccagcagaagatcaagattgccctccagaac
ctcctgcagaagaaccagagggatgagggaattctcacaaagcttgtctgtaaagtgtcc
accgttcggatgttatgccgccgccatatggaaaaactgagcacattcagagctctttac
ccagaaacggtccacacacgcttccctccactctataaggagctgtttggctcagacttt
gagcaggttctgcctcaggaggcctga
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