Carassius auratus (goldfish): 113049598
Help
Entry
113049598 CDS
T07313
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113049598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113049598
Enzymes [BR:
caua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
113049598
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113049598
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113049598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_NXF1-5
LRR_R13L1-DRL21
type_II_gspD_N0
Motif
Other DBs
NCBI-GeneID:
113049598
NCBI-ProteinID:
XP_026067862
Ensembl:
ENSCARG00000018181
UniProt:
A0A6P6K9T3
LinkDB
All DBs
Position
30:20562781..20574363
Genome browser
AA seq
560 aa
AA seq
DB search
MPKEKYDPPDPRRLYTIMSAEEAASGKKSHWTELEISGRVRSLSSSLWTLTHLTALHINN
NNLSRLPPEIAKLPHLVYLNLSSNKLRSLPAELGNMVTLRELLLNNNCLRVLPYELGRLF
QLQTLGLKGNPLSQDILNLYQEPDGTRKLLNYMLDNLAVHPEQLPQRPWITLRERDQMMP
TAVFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEITNCDADIISLQEVETEQ
YYTFFLETLKERGYDGYFCPKSRAKLMSEQERKHVDGCAVFFKTDKFALVQKHTVEFNQV
AMANSEGSEVMLNRVMTKDNIGVAVLLEVKKDLFASGLKQPSEKQLLLVANAHMHWDPEY
SDVKLIQTMMFLSELKSIAERASGSINSASPTSDTSSIPIVLCADLNSLPDSGVVEYLSN
GGVAENHKDFKELRYSDCITNFSCNSKNGKPDGSITHSFLLKSAYEGNLMPYTNYTYDFK
GVIDYIFFSKTHMRVLGVLGPLETQWLKDNNITGCPHPHIPSDHFSLLAQLEYQPPLPPI
NGLHLPVHSSTACESKTLTE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcctccagacccacgcagattatataccatcatgtcagcc
gaggaagcagccagtgggaagaagtcacactggaccgagttggagatttctgggcgggtc
agaagtctaagcagctcactatggacgctgacccatctgactgctctccacatcaacaac
aacaacctgagccggcttcctcctgaaatcgcaaagctaccccatctcgtctacctaaac
ctgtcctccaacaaactgcgcagcctgccagcagaactcggcaacatggtgactctcagg
gaattgcttttgaacaacaattgtttacgagttttgccttatgaacttggtcggttgttc
cagttgcaaacccttggactcaaaggtaatccattgtcccaagatatactcaacctgtat
caggagcctgatggaacaaggaaattgttaaattacatgcttgacaatcttgcagtccac
ccagaacaactcccccaaagaccttggatcactttgagggagcgagaccaaatgatgccc
acagctgtgttcacagtaatgtgctacaacgtactgtgcgacaagtatgcaacaagacag
ttgtatggctactgtccctcatgggcccttaactgggagtacaggaagaagggcatcatg
gaggagatcactaactgtgatgctgacatcattagcctgcaggaggtggaaacagagcag
tactacactttctttctggaaacactgaaagagcgtggatatgatggctatttctgtcca
aagtctcgtgccaaactcatgtcagaacaggagcggaaacatgtggatggctgtgctgtg
ttctttaagaccgacaaatttgctctggtgcagaaacacacagtggagttcaatcaggtt
gccatggcaaactcagagggttcagaggttatgctaaacagagtcatgaccaaagataac
atcggagtagctgtcctgttggaagtgaagaaagacttgtttgctagtggtttaaagcag
ccttcagagaaacagctcctgctggtagctaatgcccacatgcactgggatccggagtac
tccgatgtgaagctcatccagacaatgatgttcctgtctgagctaaagagcatcgctgag
agggcatcgggatccatcaactctgcatcacccacgtcagacaccagctccatcccgatc
gtcctgtgcgctgacctcaactcactcccagactctggtgtggtggagtacctgagtaat
ggtggagttgcagaaaatcacaaagactttaaggaactgcgttacagcgattgtataacc
aacttcagttgcaacagtaaaaatggcaagcctgatggcagcatcacgcacagtttcctg
ctgaagagtgcctatgaggggaatctcatgccctacaccaactacacttatgacttcaag
ggtgtgattgactacattttcttctctaagacacacatgcgtgttctgggcgttctgggt
ccactggagactcagtggctgaaagacaacaacataacgggctgcccccacccacacatc
ccttctgaccacttttccctcctggctcagctggagtaccaaccgcccttaccccccatc
aacgggttgcatctgcctgtccacagcagtactgcctgtgaaagcaagacgcttacagag
tga
DBGET
integrated database retrieval system
