Carassius auratus (goldfish): 113049614
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Entry
113049614 CDS
T07313
Name
(RefSeq) snRNA-activating protein complex subunit 4-like isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113049614
03021 Transcription machinery [BR:
caua03021
]
113049614
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
113049614
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
113049614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
LbR_Ice_bind
Motif
Other DBs
NCBI-GeneID:
113049614
NCBI-ProteinID:
XP_026067900
UniProt:
A0A6P6K7P6
LinkDB
All DBs
Position
30:complement(21361704..21375347)
Genome browser
AA seq
1725 aa
AA seq
DB search
MFSGLTSSIMESDELLAKRAKIQREILALESTLGADSSIIDLLSSDSSSDGDESDDSGPE
VEGVERDDLEAERLRIQREIEELENTLGANAALADVLDGSEHDTDSRDEDSEDDDELNLP
QNVESCLQMNLVYQEVLKEKLAELEKLLKDNQQQQKEIEAQVSGPSTSSSSVPGIPPQKQ
FLGYFMKPYFKDKLTGLGPPANEETKARMSHGTRHIDDLKIKRWDGWQKTLLTDTVAKDT
MKRMLQPKLSKLDYLSAKMSRADDEGKEELKKQIDLIEKEIAEISALRDDQLLGNRHDDH
DWEKISNIDFEGLREAEDLKRFWQNYLHPSINKSVWKQDEIDKLKRIVEEYNCCHWDKIA
EALGTNRTAFMCFQTYQRYISKAFRKKEWTKEEDEILRKLVEKMKIGNFIPYIQMSFFME
GRDGSQLAYRWTSVLDPSIKKGPWSKEEDQLLRNAVAKYGTKEWGKIRLEVPGRTDGACR
DRYLDCLQENVKKGPWSEEEVELLKEKVAKYGVGKWTKIASEIPNRIDCQCLSKWKLLTQ
ASKSKELRSKGIKRQRRTTTVPRKRKRQKALKTIKKEMLSSSEDEKQVKYMDSDVESDAP
LVKIREIPRKDYKQPDMKEWIPVNSIPGVRSLETLRTVWVHPPSNEEELEKSTLESGTGR
IRSKNSKCAKVILCLVRNTILNHFGNVERSYVGLNPTVLQSQTEDEKAMLKVSMSDIKHF
LQWKGASVAKKQNDLKEKMKKQKNVKKRRSVQDVSSLNNDLFKAITPWIGNVILPAPVNE
NTFCEGDIVGMKAEDIALPKTSVFSFFLKAFQIDIKGCRNVIEIQQIINIKKPIAQAKPQ
TVSAILKDAKPKALHKKPAEPPQHPPPLQPVLLNPLQMPARQKTTATLIQPQTLFITQPN
NQRAVQPLLIKSTPQVLSQIPLQLIQTTAPAQTVMASTPKSASTEDSNSNISAKRSRKPT
EKVQALMEEAKAKGSKKESPKLNQGKQNVVFATFTLQTQPLNWILTPTKLVQVTGPLSAN
IPRNQTLTVPNSSPLNNSISPCISTNLNPASSALVVAASSVSPTLIHSSVSNASRDSPKT
SSSVNINPNGIQTPLSPTSTLVQSKSVLHSVQMLSPTPIRVNQEGSHVEVTKNSSDSSSD
ESIVKQYQTSASTGSGVSHAVLPVPLTMPSLASSPVVLKPTNNVAVAKSPGVIVASSPQI
VASSRKIVAPSPLIVSSSPQIVASSPQIVASSRKIVAPSPLIVSSSPQIVASSPQIVASS
PLIVASSPLNMTPSPPILNPSAHIGAPSRQIVAPLTRIMAPSPQIVAPLGQFVAPSTQIV
ASSPPSPRIMAPPPLIAAPSTRIAAPLVRIVGTSPQIMDPSLQIVAPPPRIMAPSPPSPR
IMPQPPQIVAPSPHIMAASARVGAPSPQIVAPSLQIVAPSVRVVAPPPQTPPSTRIAAPS
VQIAAPSPQIVAPTPRILAPPPRIIAPSLQIVAPTPRIMAPSTRIAAPSVQIVAPSTRIA
APSVQIVAPSLQIAAPPTRTVAQSEIPQIRTLSEPLLPLPDISSDVVSFNPHLIFPEQSS
EVDDWMNGKDGIPLPHLEMSLPYLPPSAASIKTLTSLLKVKQSLLAAAVNILPVEYQNYR
EEEAQVAAIRKMIAERFASNPAYQLLKARFLSCFTLPALLATINPSVKCELPTDNNGDED
EVLFLQKIKKRTRPPSARIELNTNENEASAKQFSGISTKRQRSQH
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaggtctcacctcgtctatcatggaatcagatgagttgcttgcgaagagagct
aaaatccagagggagattttggctcttgagagtactctgggtgcagacagcagcatcata
gaccttctgtcatctgacagcagcagtgatggtgatgaatctgatgacagtggacctgaa
gttgaaggagtggagcgtgatgacttggaggcagagcgtctgcggatacagagggagatt
gaagagttagagaatacacttggtgctaatgcagcactggccgatgtattggatgggagt
gaacatgacactgattctagggatgaagacagtgaggatgatgatgagttgaatcttcct
caaaatgtggagagttgcctgcagatgaatttagtctatcaggaggtgttgaaagagaaa
ctagctgagctggaaaaactccttaaagacaatcaacagcagcagaaagagattgaggcc
caggtctccggcccaagcacttctagctcctccgtaccaggaattccccctcagaaacaa
tttcttggatactttatgaagccttacttcaaagacaaactcactggtctgggccctcca
gccaatgaagaaactaaagcaagaatgagtcatggtaccagacacattgatgacctgaaa
ataaaaagatgggatggttggcagaaaactttgctgaccgacaccgttgccaaagacacc
atgaaacggatgctacaacccaaactatccaagttggactatcttagtgccaagatgtct
agagctgatgatgagggaaaagaagaactgaaaaaacaaatagatttaatcgagaaagaa
attgcagaaataagtgccctgagagacgatcagctgctgggtaatcgccatgatgatcat
gactgggagaaaatatcaaatattgactttgaaggcttgcgggaggctgaggatttgaaa
aggttctggcagaactatttgcacccctccattaacaagtccgtatggaaacaggatgag
attgataaactgaaaagaattgtggaagagtacaattgctgccattgggacaaaatcgca
gaggctcttgggacaaacagaacggctttcatgtgcttccagacttaccagcgctacatt
tcaaaggccttcagaaagaaagagtggacaaaagaggaagatgagatcctcagaaaactg
gttgaaaaaatgaaaattggcaacttcattccttacatacagatgtcattcttcatggaa
ggccgtgatggatcacagctggcatatcgctggacatctgttttggatccctctataaag
aaaggcccctggtccaaagaggaggaccagttgttgcggaatgctgtcgcaaaatacgga
accaaagaatgggggaaaatcagattggaagtcccaggtcggactgacggtgcttgtcgt
gacaggtatttggattgtcttcaggagaatgtgaaaaagggtccttggagcgaagaggag
gtggagctactaaaagaaaaggttgcgaaatatggtgttggcaaatggactaagattgct
tcagagatcccaaaccggattgactgccagtgtctaagcaagtggaaattactaacacaa
gctagtaagagtaaagagcttcggagtaaaggcataaaaagacaaaggaggacaacaaca
gtgccacgaaaaagaaaaagacaaaaggcattgaaaactattaaaaaggagatgctctcc
tccagtgaggacgaaaaacaggtaaagtatatggacagcgatgttgaatcagatgctccc
ttggtcaaaattcgggaaataccacgaaaggactacaaacagccagatatgaaggaatgg
atacctgtaaattcaatcccaggggttcgttctctagaaactctcaggactgtgtgggtg
catcctccgtccaatgaggaggagctagagaaatccactctagaatctggcacaggccgc
attcgatcaaagaacagcaagtgtgcaaaagtcatcctctgtttagtgcgcaataccatc
ctaaaccactttggaaacgtggaaaggtcttatgtaggtttgaatcctactgtcttgcag
agtcagactgaagatgagaaggccatgctcaaggtgtctatgagtgatattaaacatttt
ctgcagtggaagggagcatctgtagctaagaagcaaaatgacctaaaggagaaaatgaaa
aaacaaaaaaatgttaagaaaagaaggtcggttcaggacgtttccagccttaataatgac
ctcttcaaagccatcactccatggattggtaatgtgatcctgcctgctccagtgaatgaa
aacacattttgtgaaggtgatattgttggaatgaaagcagaagacatcgctcttccaaaa
acatcagtgttttcatttttcctcaaggcttttcaaatagacatcaagggttgcaggaat
gtcattgaaattcagcaaatcatcaacattaagaagccaattgctcaagctaaaccacaa
acagtgtcagcgattcttaaggatgcaaaaccgaaagctttgcacaagaaacctgcagaa
cctcctcaacacccacctcccctgcagccggttcttctcaaccctctccaaatgccagcc
aggcagaagacaaccgctacattgattcaaccccaaactcttttcattacacagccaaac
aaccagagggcagtgcagcctttactaatcaagtcaacaccacaagttttatcacagatt
cctctgcagctaatacagacaacagcacctgcacaaactgtcatggcctcaacccccaaa
tcagcaagtacagaggactcaaacagcaacatatctgcaaaacgcagccgcaaacctact
gagaaagtccaagccctgatggaagaagctaaagctaaaggtagtaaaaaagagtcaccg
aaactaaatcaaggcaaacagaatgttgtttttgcaacttttacattgcagacgcagcca
ctaaactggattcttacccccaccaaattggtacaagtaactggtccactttctgctaat
atcccaaggaaccagacactaactgtgccaaatagttcccccctgaataacagtattagt
ccatgcatctcaactaatctaaacccagcatcatctgcactggttgttgctgcttcctct
gttagtcctacccttatacattcttcagtctcgaatgcctccagagatagcccaaagact
tcctcttctgtgaacattaaccccaatggcatacagacacctctttcacctacttctaca
ttagtgcagagcaaaagtgtgctacatagtgttcagatgttatccccaacacctatcaga
gtgaaccaggaaggttcacatgttgaagtgacaaagaactcctccgactcctcttctgat
gaatccattgtgaagcagtatcaaacatctgcatcaactggttctggagtatctcatgct
gttcttcctgttcccttgactatgccatctttggctagttcgccagtcgtattgaagcca
acaaataatgttgcagtggcaaagtctcctggtgttatcgttgcttcctcacctcagatt
gtggcttcctcacgtaaaatcgtggctccctcacctcttattgtgagttcctcacctcag
atagtggcttcctcacctcagatagtggcttcctcacgtaaaatcgtggctccctcacct
cttattgtgagttcctcacctcagatagtggcttcctcacctcagatagtggcttcctca
cctctgattgtggcttcctctcctctgaatatgactccatcacctccaattttgaatcca
tcagctcatattggggctccatcacgacagattgtggctccattaactcggattatggcc
ccatcacctcagattgtagctccattaggtcagtttgtggctccatcaactcagattgtg
gcttcatcacctccatcacctcggattatggctccaccacctctgattgcggctccatca
actcggattgcagctccattagttcggattgtgggtacatcacctcagattatggatcca
tcactgcagattgtggctccaccacctcggattatggctccatcacctccttcacctcgt
attatgcctcaaccacctcagattgtggctccatcacctcacattatggccgcatcagct
cgggttggggctccatcacctcagattgttgctccatcacttcagattgtggctccatca
gttcgggttgtggctccaccacctcagacacctccatcaactcggattgcagccccatca
gttcagattgcagctccatcacctcagattgtggctccaacacctcgcattttggctcca
ccacctcgtattattgctccatcacttcagattgtggctccaacacctcgtattatggct
ccatctactcggattgctgccccatcagttcagattgtggctccatcaactcggattgca
gccccatcagttcagattgtggctccatcacttcagattgcggctccaccaactcggaca
gtagctcaatcagaaatacctcaaatcagaacattaagtgaaccattgctccctcttcct
gatatttcctctgatgttgttagctttaatcctcacctgatattccctgagcagtcatct
gaagtagatgactggatgaatggaaaagatggcattccactacctcatttagagatgtct
ttgccttaccttccaccatcagccgccagcatcaaaacactgacttctctgctcaaagta
aaacaatctctgcttgcagctgcagtgaatatcctgccagttgagtatcaaaactataga
gaggaagaagctcaagtagctgctatccgcaaaatgattgccgaaaggtttgcctcaaat
ccggcgtatcagcttttgaaggctcgtttcttgtcgtgctttactttgccagcccttttg
gccactataaacccttctgtgaaatgtgagctgcccacagataacaatggtgatgaagat
gaggtcttgtttttacaaaagataaaaaaaaggactcggccaccatctgcaaggatcgag
cttaacacaaatgaaaatgaagcatcagcaaaacagttctcaggaattagtacaaaaagg
caaaggagtcaacattga
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integrated database retrieval system
