Carassius auratus (goldfish): 113049780
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Entry
113049780 CDS
T07313
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04270
Vascular smooth muscle contraction
caua04625
C-type lectin receptor signaling pathway
caua04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
113049780
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
113049780
09153 Circulatory system
04270 Vascular smooth muscle contraction
113049780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113049780
Membrane trafficking [BR:
caua04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
113049780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
113049780
NCBI-ProteinID:
XP_026068193
Ensembl:
ENSCARG00000022317
UniProt:
A0A6P6K730
LinkDB
All DBs
Position
30:25661329..25741633
Genome browser
AA seq
1429 aa
AA seq
DB search
MSGTQSTLAERFPKKASRTGSILSKDHPPDKKPKSDKASVPPSHEFDPTGLVQRCVIIQK
DENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHVEVVKLIKSG
SYVALTVLGRPPGLAQIPLSDGEGEEGPLFSLTSPQSPGPIGPDRSSSSPSPSERKLTPL
SVWAMMEEHSRNPAPKLLKEIQDAKKHIPQHQEQLSKPSGTGQDGSLSPRPGEGEQEDGG
GDLDQPLSWQGDAGMEPPWTNNNTAPVTPSPVPESPCQRETPCHSPKTTPRDSLNSCPSP
DAEDTPDLDSQSSVGSPSSRLVAQIIGAEDEDFDTEQEQMNGQCSCFQSVDLLKSRPAHL
AAFIHHVVSQFDPAPLLCYLYAEIYKQSSSKETRRILMDTFFVEKTASLKVTVPESIIVD
LERTAHSNNAERKKPEPISEDVHRQYVQQLQDTLLPDIQKNLEDFRHKRSMGLTLAEAEL
ARLDTERMRDRVALEKERSCAEHIISKIEDVLLTSQATEEDKCSTMQFVILSYMKQLGVK
VKESRGLEHKPKLMNLFPKIKRSIKPEKDGSEKKTRFPNVFPPRRPSRIDTSAISRALEP
RQRPTKPPLPLGTGEQADGSSPPVRSSQSSEVSDGTTAQFTSPPYSAPAAQGTDGISREP
EAGGLPSSALPRLGDGVVPGDLQDSSSSNTHFDFSPCTLEHLQEEEAETDKTQDTGTPRP
DRRRMEPLCSGEVQSEDDQCAEVELEPLNWQTLVSRDVLSTLTPQEIKRQEVINELFYTE
KAHVRMMKVLENLFYQPLIRDSILPPADIKNIFSNLEEIVQLHMSLTEQMTAVRKKNETA
LIDSIGDDLLSWFSGEEEVKIKRAAGTYCSNQPFALELIKSKQKKDQRFSSFIQEAESNR
HCRRLQLKDIIPVETQRLTKYPLLLENIAKNTEDPEERRKVKQAGECCRKILTHVNQEVK
EAENKQRLEDYQRRLDLSSLKQSENPMISEFKNLDLTKRKMVHEGPLSWKVNKDKTIELY
TLLLEDILVLLQRQDEKLILKCHSKNLAGTAETKHIFSPIIKLSTVMVRSVATDNRSFFV
ISMSDNGAQIYELMAQTVSEQKTWQCLITQRADCMKTKLHNIIPLPQTDVEREAVELINS
GVQKLNKESEPISLVSIQSPEKDGTEVMPTPACGTNPFETKSDEEEEEEEEENSLQDQGE
DDEAFVVADMTDRLTFLKQRSRLGIAIDEDEAEAFELQPLRADEALRTLATLRQLLINHM
SSQEDTDRDIERREQRDDVARTGSQQGTEDSTAIRSAVENGSERTENRAENAQDLPSGDT
GFFETSEECVSAGSYMVLEVYGESSTDDVQGSSGEPVAAGDSGIDLKKLLSSSSQSSGGP
NLNRQIMTHIRILQANLQHLKDTEIKYNQLRQKLSEEPATDTEEDKDKS
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacacagtccacgcttgctgagaggtttcccaaaaaagcgagcaggacagga
agtattctcagcaaggatcatcccccagacaaaaagcccaaaagcgacaaggcgtcagtg
cccccctcgcatgagtttgaccccacagggcttgtgcagcgttgtgttatcatccagaaa
gatgagaatggctttgggctgacagtgagcggcgataaccctgtgtttgtacagcttgta
aaagaggatggagctgccatgcgagctggtgttcagacaggtgaccggatcataaaggtc
aatgggacattagttacacattcaaatcatgtagaagttgtaaagctaataaaatcgggc
tcctatgtggccctgacagttctggggagaccgccgggcctggctcagatccccctctca
gatggcgagggggaggaggggcctctcttctcactcacttcccctcagtccccggggccc
attggtccagaccgctcgtcttcctcccccagcccctcggagcgcaaactgacccctctg
tctgtatgggccatgatggaggagcacagcaggaaccctgctcctaaactactgaaggaa
atccaggacgccaagaagcacattccacagcaccaggagcagctcagcaagccctctggg
actggacaggatggctccttatctccaaggccaggagaaggagagcaggaggatggaggg
ggagatttggatcagcccctttcatggcagggcgatgctggaatggagccaccgtggacc
aacaataacacagcccctgtcactcccagtcctgtcccagagagtccatgccaaagagag
accccctgccacagcccaaagaccacaccccgagatagcctcaactcctgtccatcaccg
gacgctgaagacacacctgaccttgattctcagtcgagtgtggggagcccctcatctcgt
ctggtagcacaaatcattggtgctgaggacgaagactttgacacagagcaggaacagatg
aatggccagtgtagctgttttcagagtgtagacctccttaaatctcggcctgctcacctg
gcagctttcatccatcatgtggtctctcagtttgaccctgcaccactgctgtgctacctc
tatgctgaaatttacaaacagtccagctccaaagagacacgacgaatcctcatggatacc
ttcttcgtagaaaaaacagctagcttgaaagtaacagtacccgaatccattatcgttgac
ctggaacggactgcacactcaaataatgcagaacggaagaagccggagcctatctcagag
gatgtccaccggcaatatgtgcagcagctgcaggacacactactacctgacatccagaag
aacctagaagacttcaggcacaagcgcagtatgggtctgaccctggctgaagcagagcta
gcccgtctggatacagagagaatgagagaccgtgtggctctggaaaaagagcgatcctgt
gcagagcacattatctctaagatagaggatgtactattgacgtcacaggccacagaggaa
gataagtgtagcaccatgcagtttgtgatactgtcatatatgaagcagctcggcgtaaaa
gtgaaggagtctcgagggctggagcacaagcccaagctaatgaatcttttccctaagatc
aagagaagtataaagcctgagaaagatggaagtgagaagaaaactcgatttcctaatgtc
tttcctccgagacggccgagcaggattgacacttcagcaatcagcagggctctggagccg
aggcagcgtccgacaaagcctccgctgccgctgggcaccggagagcaggcagatggctcg
tctcctcctgtacggagcagtcagtcgagtgaagtctcagatggcaccactgcccagttc
acgtcacccccttacagcgctccagcagcacagggcacagacggcatcagccgagagcct
gaggctggaggactcccctcttctgcactacctagactgggagacggtgtcgtcccggga
gatctgcaggactcgtcctcctcaaacactcactttgacttcagcccctgtacactggag
catctacaggaggaggaagctgagacagacaagacgcaggacaccggcacccccaggcct
gacaggagaaggatggagccgctgtgctctggagaggtgcagagtgaagacgatcagtgt
gctgaggtagagctggagcctctgaactggcagacgctggtgagcagagacgtcctgtcc
acactaacccctcaggaaatcaagagacaggaagtcatcaacgagttgttctacacagag
aaagcacacgttcgaatgatgaaggttctggagaatttgttttaccagccgctgatccga
gactccatcctccctcctgcagacatcaaaaacatcttcagcaacctcgaggagatcgtt
cagctgcacatgtctttaacagaacaaatgactgcggttcggaagaaaaatgagacggcg
ctcattgactcaataggagatgatttgctttcctggttcagtggagaagaagaggtgaag
atcaagagagctgccggcacgtactgcagtaatcaacctttcgccctggagctcatcaag
agcaaacagaagaaagaccagcgcttcagctccttcatacaggaggcagagagtaaccga
cattgtcgcaggttacagttaaaggacattattcctgtggagacgcaaagactcacaaag
tatcccctcctgctggagaacatcgccaaaaacacagaggatcctgaggagagaaggaaa
gtgaaacaggctggcgaatgctgtcgaaagattctcactcacgtcaaccaggaggtgaag
gaagccgagaacaaacagaggttggaggactaccagagacgactggacctgtcctcactg
aagcagagcgagaaccccatgatctccgagtttaagaacctggacttgactaagaggaag
atggtgcatgagggaccgctgtcctggaaggtcaacaaagataaaactattgagctgtac
acattgctgctggaggatatattggtgctacttcaaaggcaagatgagaagctgatctta
aaatgccacagtaagaatctggcgggcactgctgagaccaaacacatcttcagccccatc
atcaaactcagcactgtgatggtgcgctcggtcgccaccgacaacaggtcattctttgtc
atctctatgtctgataatggagcgcagatctatgaactaatggctcaaaccgtttctgag
caaaagacgtggcagtgtctgatcacacaacgagccgattgtatgaagaccaaactacac
aacatcattccattacctcagactgacgtggaacgagaagcggtcgagttgataaactct
ggtgttcagaaactaaacaaagagtctgagcccatttctttagtgagcattcagtctcca
gaaaaagatggcaccgaggtcatgccaaccccagcatgtggcaccaacccattcgagacc
aaatctgatgaggaggaggaagaagaagaagaagaaaactcactacaggatcagggtgaa
gatgatgaagcgttcgtggtggccgatatgaccgatcgccttacattcctgaagcagcgc
tcgaggctgggcatcgccatagacgaggacgaggccgaggccttcgagctccagcctctc
agagctgatgaagctctcagaacactggcaacactaaggcagctcctgatcaaccacatg
tccagtcaggaggacacagacagagacatcgagaggcgagagcaacgggacgatgtggcg
aggacaggctctcagcaggggacggaggacagcactgcgatcaggtccgctgttgagaac
ggctcagagaggaccgagaacagagcggagaacgcacaggatctgccctctggagacacc
ggcttctttgagacgtctgaggagtgtgtctctgcaggcagttatatggtgctggaggtg
tatggtgagagcagcacagatgatgtgcagggcagcagcggggagccggtggcagcggga
gactcgggcattgacttgaagaagctcctttcttcctcctctcagagcagcggaggacca
aacctcaacagacagatcatgacacacatacggatactacaggccaacctgcagcatctg
aaggatacagaaatcaagtataaccagctacgccaaaagctatcagaggaacccgctact
gacacagaggaagacaaagataaaagttag
DBGET
integrated database retrieval system
