KEGG   Carassius auratus (goldfish): 113049809
Entry
113049809         CDS       T07313                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like isoform X1
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113049809
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:caua03041]
    113049809
Spliceosome [BR:caua03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    113049809
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_THOC3 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_EML NBCH_WD40 Beta-prop_Aladin ANAPC4_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_Vps41 WD_LRWD1 WD40_like Beta-prop_DCAF12 Ge1_WD40 Beta-prop_WDR11_1st Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Tricorn_2nd
Other DBs
NCBI-GeneID: 113049809
NCBI-ProteinID: XP_026068239
Ensembl: ENSCARG00000008854
UniProt: A0A6P6K7G8
LinkDB
Position
30:complement(26311401..26317184)
AA seq 297 aa
MLRGHKKRFQSRREQLNSKSFTRPCGSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQA
TLTLEESDVNMASCAADGSVKLWSLDSDEPVADIEGHSMRVARVAWHPSGRFLGTTCYDN
SWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDAFARVWDLRTGRCIMFLEG
HHQEIYSINFSPNGFHVATGSGDNTCKVWDLRRRRCMYTIPAHENLVSSVKFQPNDGHFL
LTGAYDSTAKVWTHPGWSPLKTLAGHEGKVMGLDLSPNGQLIATCSYDRTFKLWMAE
NT seq 894 nt   +upstreamnt  +downstreamnt
atgctgcgagggcacaaaaagagattccagagtcgacgagaacagttaaacagcaagagc
ttcacaagaccctgcgggagtggcttgtgtaaattgtggaaagtcccagattgtacactt
atccgcacattaagaggtcacaataccaatgtgggagcaattagctttcaccctcaagcc
acactcacactcgaggagtccgatgtcaatatggcctcctgtgctgcggatggatctgtt
aagctgtggagtttagacagtgatgagcctgtagcagacattgaggggcactctatgagg
gtggctcgggtggcctggcatccttctgggcggttcctgggaacgacttgctatgataac
tcatggcgactttgggatcttgaagtccaagaagaaattttgcatcaggagggtcatagt
aaaggtgtccatgacctgcacttccacccagatggctctctggcgggaactggtggtttg
gatgcatttgctcgtgtctgggacctgcggactggtcgttgcatcatgtttctggaagga
caccaccaagagatttatagcatcaatttctcaccaaacggctttcacgtagcaacggga
agtggagataacacctgtaaagtgtgggaccttcgtcgtagaaggtgcatgtacacaatt
cctgcccatgagaaccttgtgtcttcagtcaagttccaacctaatgacgggcattttctg
ctgactggtgcatatgacagcacagccaaagtgtggacccatccgggctggtcacctctg
aagactctggcgggtcatgaagggaaggtcatggggcttgacctttcacccaatggacag
ctcattgccacctgctcttatgacagaacctttaaactctggatggcagaatga

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