Carassius auratus (goldfish): 113049819
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Entry
113049819 CDS
T07313
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113049819
03041 Spliceosome [BR:
caua03041
]
113049819
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
113049819
Spliceosome [BR:
caua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113049819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
Nup35_RRM_2
RRM_Nup35
RRM_3
DUF1866
Motif
Other DBs
NCBI-GeneID:
113049819
NCBI-ProteinID:
XP_026068255
Ensembl:
ENSCARG00000009430
UniProt:
A0A6P6K8L8
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All DBs
Position
30:26468907..26477605
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AA seq
386 aa
AA seq
DB search
MMDDEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDAAGNDPYCFVEFFEHRHA
AATIAAMNGRKIMGKEVKVNWATSPSSQKKDTTNHFHVFVGDLSPEITTDDIRAAFAPFG
RISDARVVKDLATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
ATYETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEIRVFPDKG
YSFVRFNSHESAAHAIVSVNGTSVEGHMVKCYWGKETTDMVSPMQQVQVPQQNKVGFAAQ
PYGQWGQWYGNAQQISQYVPNGWQVPTYGVYGQAWNQQSFNHIQAGAGWPGVSAVSNGGV
VEPAQGVNGTVLANHSSMGTAGYHTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgagcagcccaagaccctgtatgtgggaaacctgtcacgggatgtgacc
gaggcccttataatgcagctctttggtcaaattggcccctgcaagagttgtaaaatgatt
gtggatgcggcaggtaacgatccatactgctttgtggagttcttcgagcacaggcacgca
gcggccacaatcgcagctatgaacgggcgtaaaataatgggtaaggaggtaaaggtcaac
tgggctacttcacctagcagccagaaaaaagacacaaccaatcacttccatgtctttgtt
ggagacctcagtccagaaatcaccactgatgacatcagagctgcctttgcaccctttggg
aggatatcagacgcacgtgtagtcaaagacttggcaacggggaagtcaaaaggctatggt
tttgtctcattcttcaacaaatgggatgcagagaatgccattcagcaaatgggaggtcag
tggttgggcggcaggcagatcaggactaactgggctacaagaaaacccccagcgcctaaa
gcaacctatgaaacaaataccaagcacttgtcgtttgatgaagtggtgaaccagtccagc
cccagcaactgcactgtgtattgtggtggagtcactacaggccttacagaacaactcatg
agacagaccttttccccatttggtcaaatcatggaaattcgagtgtttccagacaaaggc
tactcgtttgtgaggttcaactctcacgaaagtgcagctcatgcgatagtgtctgttaat
ggcacgtccgtagaaggtcacatggtgaaatgttactggggtaaagagaccacagacatg
gtgagccccatgcagcaggtgcaggtaccccagcagaacaaagttggttttgctgcacaa
ccctatggccagtggggacagtggtacggcaacgcacaacaaattagtcagtacgtccct
aacggctggcaggtacccacttacggtgtgtacggacaggcctggaaccagcagagcttc
aatcacatacaggctggtgctgggtggcccggtgtgagcgccgtgagtaacggaggcgtg
gtggagcctgcgcagggagttaacgggaccgtgttagccaatcattccagcatgggcact
gcaggataccacacacactga
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