Carassius auratus (goldfish): 113050112
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Entry
113050112 CDS
T07313
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
caua01002
]
113050112
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113050112
Enzymes [BR:
caua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113050112
Peptidases and inhibitors [BR:
caua01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113050112
Ubiquitin system [BR:
caua04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113050112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Motif
Other DBs
NCBI-GeneID:
113050112
NCBI-ProteinID:
XP_026068582
Ensembl:
ENSCARG00000037499
UniProt:
A0A6P6KBS6
LinkDB
All DBs
Position
31:230620..254867
Genome browser
AA seq
2561 aa
AA seq
DB search
MTATTRGSPVGGNESQSQAPDGQNQNQNQTLLPQTQTQTPSTNSSNETSPISPPEEVGQG
EAPPTQEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIELSKKGLDVRCE
ACQRFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLIELCVVKLAQDWFPLLELL
AMATNPHCKFHIYNGTRPSESVPAGAQLADDELFARPPDPRSPKGWLVDLINKFGTLNGF
QTLQDRFTSGQALNVQIIAALIKPFGQCYEFLTLHTVKKFFLPIIEMVPQFLENLTDEEL
KKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNA
LNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNSILSIVLRDSLHQPQYVEKLE
KILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKA
SWTNAGKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIK
ILDYSCSQDRDTQKMQWIDRFIEELRTNEKWVIPALKQIREICSLFGEAPQNLSQTQRSP
HVFYRHDLINQLQHNHALVTLVAENLSAYMDNMRLFSREHPVFDPQTVRAGSRYSHVQEV
QERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGDEPDLDPD
INKDFFENNVLQLDPTLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYL
WRVVIQGSDDIAARAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKASYDTLCVLD
GDKDSINCARQEAIRMVRVLTVLREYITECDSDYHEERTILPMSRAFRGKHITLVVRFPN
QGRQVDDLDIWSHTNDTIGSVRRCILARIKANSTHTKVELFIGGELVDPADDRRLIGQLN
LKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPPNHTNHYSDAPSPEVESCLPGVIMSLH
LRYISFLWQVADLGCTLNMPLLRDGARVLMKLMPPDNTTVENLRAICLDHAKLGENSLSP
SLDSRFFGPSASQVLYLTEVVYALLMPASGTLGDDASDFQYNFLKSGGLPLVLGMLTRNN
FLPNADMETRRGAYLNALKISKLLLTAIGFGHVKAVAEACQPLVEGTNPTSPINQATHEQ
ALVLQNALQSIPNPSSECMLRNVSVRLAQQISDENFFQASKYIPDICVIRAVQKIVWASG
CGMVHLVFSSNEEISQIYQKTNAGNEPDAEDEQVCCEALEVMTLCFAVLPTALDTLSKEK
VWQTFIIDLLLHCQSKAVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGSTAKERAK
HAGDYFTLLRHLLNYAFNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGETGVEETILEGH
LGVTKELLAFQTPEKKFYIGCEKGGANLIKELIDDFIFPASNVFLQFVKSGEFPAEQATP
VCSSPASVNAGFELLVALSVGCVRNLRQIVDTLTDMYYLGCEALTEWEYLPPVGPRPTKG
FVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGSDIDDDMSGDEKQDNESNVDPRD
DVFSYHQQFDDKPSLNKAEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWG
EPVNLREQHDALEFFNSLVDSLDEALKALGHPSMLSRILGGSFADQKICQGCPHRYECEE
SFTTLNVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIRKLPPVLAI
QLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVEKLEGDEVPPESQVIAESSPEES
DPNDSSRFRLVGVLVHSGQASGGHYYSYIMQRHGNSSDGQKDRWYKFDDGDVTECKMEDD
EEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTAGGDRELLKHISELT
LAPHTNQPKMPLTIEASVRKQNVQFMHSRMQYSLEYFQFVKKLLTCNSVYLNPPPGQDHL
LPEAEEIAMISIQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSKNVRSWFAHNVL
FAFPTRFSEYLLECPSAEVRGAFAKLMVFIAHFSLQDGPCPAPVTSPGSSTQACDGVTLS
DHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLSVPATFMLVALDEG
PGPPIKYQYAELGKLYSVVSQLVRCCDVTPRMQSSINGNPPLTNPYGDPSLTAPIMPLQQ
LVAEILFVRSSYVKKIIEDCSSSEETVKLLRFCCWENPQFSSTVLSELLWQVAYSYTYEL
RPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVA
LFSSCAVAHQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYSYNNWSPPVQSNETSN
GYFLERSHSARMTLAKACELCPEEEPDDQEAPDEHDSSPPEDTALYPHPPGTQYQQPNNQ
PHAQPYTGPAAQHMNNPQRPPQRPQESWDGADEVPPVQTKE
NT seq
7686 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacccgcggctcgcccgtggggggcaacgagagccagagccaggcgccg
gacggccagaaccagaaccagaaccaaaccctgctgccccagacccagacccagacgccc
tcaacaaactcctccaatgagacgtcacccatcagtccgccagaggaagtggggcaggga
gaagccccgcccacacaggaagaggaggagccagccttcccccacacagacctggccaag
ctggacgacatgatcaaccggccgcgctgggtggttccagtcctgcccaaaggagagctg
gaggttctgctggaagctgctatagagctcagtaaaaaagggctcgatgtgaggtgtgag
gcgtgtcagaggtttttccgcgatggcctgacgatctcgttcaccaaaatcctgacggat
gaggctgtgagcggctggaagtttgagatccacaggtgcataatcaataacacccaccgt
ctgatcgagctctgcgtggtcaagctggctcaggattggttccctctgctggaactgctg
gccatggccactaacccacactgcaagttccacatttacaacggcacacgtccgtctgag
agtgtcccagcgggagcgcagctggcagatgatgagctgttcgcccggccgcccgaccca
cgctctccgaagggttggctggtggacctcattaataagttcgggacgttgaacggcttc
cagactctgcaggatcgcttcacgagcggccaggctctcaacgtgcagatcatcgcagct
ctcatcaaaccgttcggccagtgctacgagttcttgactttgcacacggtgaagaagttc
ttcttgcccataatcgagatggtcccacagtttctggagaacctcacagacgaggagctg
aagaaggaggccaagaacgaggccaagaacgatgctctgtccatgatcataaagtccttg
aagaacctggcgtctagagttcctggtcaggaggaaacggtcaagaacctggaaatcttc
cggttaaaaatgatccttcggttgttgcagatttcttcatttaatgggaaaatgaacgca
ctgaatgaagtgaacaaggtgatctcgagcgtgtcgtattacacgcaccggcacggaaac
ccagaggaagaggagtggctgaccgccgagagaatggctgaatggattcagcagaacagt
attctgtccatcgttctgagagacagtcttcaccagccgcagtacgtggagaagctggag
aagatcctgcgcttcgtcatcaaggagaaagctctgaccctgcaggacctggacaacatc
tgggcggctcaggccggtaaacacgaagcgatcgtcaagaacgtccacgatctgttagcc
aagctagcgtgggatttttccccggagcagctggatcacctgttcgactgcttcaaggcc
agctggacgaacgctggtaagaagcagcgggagaagcttctggagttgatccgcaggctg
gcggaggacgataaggacggagtgatggctcacaaagtgctcaacctgctgtggaacctg
gcacacagtgatgacgtccccgtggacatcatggaccaggctttgagcgcacacatcaag
atcctggactacagctgctcgcaggaccgagacacgcagaagatgcagtggatcgaccgc
ttcatcgaggagctccgcacgaatgagaagtgggtgattccagcgctgaagcagatcaga
gagatctgcagcttgtttggagaagctcctcagaacctcagtcagacgcagaggagtcca
cacgtcttctaccgtcacgatctgatcaaccagctccagcacaatcacgctctcgtgacg
ctggtggccgagaacctgtctgcgtacatggacaacatgaggctcttctccagagagcat
ccagtgtttgatcctcagacggttcgagcaggaagccggtacagccatgtacaggaagtg
caagagaggctcaatttcctgaggtttctgctgaaggacggtcagctgtggctctgcgct
ccacaggccaagcagatctggaagtgtctggcggagaacgccgtgttcctgtgcgaccgc
gaggcctgctttaagtggtactccaagctcatgggtgacgagccggatctggaccccgac
atcaacaaggacttttttgagaacaacgtgctgcagctggaccccacgctgctcacggag
aacggcatgaagtgcttcgagcgcttcttcaaggctgtgaactgcagagagggcaagctg
gtggccaaacgcagggcctacatgatggacgacctggagctgatcggcctggactacctc
tggagggtggtgattcaaggcagtgatgacatcgccgctcgagcgatagacctgctgaaa
gaaatatacaccaacctcggacccaaactacaggtgaatcaggtggagatccatgaggac
ttcatccagtcgtgcttcgaccggctcaaagcctcgtatgacacgctgtgtgtgctggac
ggagacaaggacagcattaactgcgccagacaggaggccatacgcatggtgcgtgtcctg
acggtgctccgagagtacatcaccgagtgtgacagcgactaccacgaggagaggaccatc
ctgcccatgtccagggcgttccgggggaagcacatcactctggtggtgaggtttcccaat
cagggccgtcaggtggacgacttagacatctggtcccacaccaacgacaccatcggctcg
gtccgccgctgcatcctcgctcgcatcaaagccaacagcacacacaccaaagtggagctg
ttcatcggaggagagctggtggaccccgctgatgaccgccggctgattggacagctcaac
ctcaaagataaaaccctcatcacagcgaagctcacgcaggtcagcgccaacatgccctcc
agccccgacagctcgtccgactcgtccaccggctcgcccccaaaccacaccaaccactac
agcgacgcccccagccccgaggtggagagctgcttgcctggagtgatcatgtctctgcac
ctgcgctacatctccttcctgtggcaggtggctgatctgggctgcaccctgaacatgccg
ttactgcgagacggagctcgagtgctcatgaagctcatgcctccagataacactacagtg
gagaacctgcgggcgatctgtttggatcacgctaagctgggagagaacagtctgagtccc
tcgctggattcacgcttctttggcccatctgcttcacaagtgctctacctcaccgaggtg
gtgtatgccctgctgatgccagccagtgggacgctgggagacgacgccagtgacttccag
tacaacttcctgaagagcggcggtctgcctctggttctgggcatgctcacgaggaacaac
ttccttcccaatgcggacatggagacgcggcgtggcgcttacctgaacgctctgaagatc
tccaagctcctgctcactgccatcgggttcggacacgtgaaggccgtggcggaggcctgt
cagccgctggtggagggaaccaaccccacatctccaataaaccaggcgacccatgagcag
gctctggtgctccagaacgctctccagagtattcccaatccctcctccgagtgcatgctg
cgtaacgtgtccgtcagactggcccagcagatctctgacgagaacttcttccaggcttca
aagtacatcccagatatctgtgtgatccgcgccgtgcagaagatcgtttgggcttccggt
tgtgggatggtgcatctggtgttcagctcgaatgaagagatcagccagatctaccagaag
actaacgcaggtaacgagccggacgctgaagacgagcaggtgtgctgtgaggcgctggag
gtcatgaccttgtgtttcgctgtgctccctacggccctcgacacactcagcaaagagaaa
gtctggcagaccttcatcatcgacctgctgctgcactgccagagcaaagctgtgcgtcag
atggcacaggagcagttcttcctcatggccaccaggtgctgtatgggacacagacccctc
ctgttcttcatcaccctcctcttcacggttctgggaagtacggcgaaggaaagagcgaag
cacgctggcgattacttcactctcttacgtcacttactcaactacgccttcaacagcaac
atcaaccttcccaacgccgaggtgctgctcaacaacgagatcgactggctcaagaggatc
cgggatgaggtgaagaggaccggagagacgggtgtggaagagaccattctagagggtcat
ctgggggtcaccaaagagctgctggcctttcagaccccggagaaaaagttctacatcggc
tgtgagaaaggaggcgctaatctgataaaggagctgatagatgacttcatcttcccggcg
tctaacgtgtttctgcagttcgtgaagagcggcgagttcccggcggagcaggccacaccg
gtgtgcagcagtcctgcgtctgtaaacgctggcttcgagctgctggtggcgctctcggtc
ggctgcgtgcggaacctcagacagatcgtcgacacgctcacagacatgtactatctaggt
tgcgaggctcttacggagtgggagtatctgcctccggtgggaccgcggccgaccaaaggc
ttcgtgggtctgaagaacgcaggagccacgtgctacatgaactctgtgatccagcagctt
tacatgatcccacccatccgcaacggcatcctggccatcgaaggcaccggaagtgacatc
gacgacgacatgtccggagacgaaaagcaggacaacgagagtaatgtggaccccagggat
gatgtgttcagttatcaccagcagtttgatgacaagccctctctcaataaggccgaggac
cggaaggagtacaacatcggagtgctgcggcatctgcaggtcatcttcggtcacctcgcc
gcgtcccgtctgcagtactacgtgcccagaggcttctggaaacagttcaggttatgggga
gaaccggtcaatctgagagagcagcacgacgcgctggagttcttcaattccctggtggac
agtctggatgaagcactgaaagcccttggacatcccagcatgctcagcaggatcttgggc
ggctcgtttgcagaccagaagatctgtcagggctgtcctcacaggtatgagtgtgaggag
tccttcacaacactgaatgttgacatcaggaaccaccaaaacctcctggactctttagaa
cagtacgtcaaaggggatcttctggagggagccaatgcgtaccactgcgagaagtgcaac
aagaaggtggacaccgtgaagcgtctcctcatcaggaagctcccgccggtgctggccatc
cagctgaagcgcttcgattacgactgggagcgcgagtgtgccatcaagttcaacgattac
ttcgagttccctcgtgagctggacatggagccctacacggtggcaggtgtggagaagctg
gagggggacgaggttcctccggagagccaggtcatcgctgagagctcgcccgaggagtcg
gatccgaacgacagctcacgcttccggctcgtgggggtgctggtgcactcgggccaggcc
agcggaggacattattactcttacatcatgcagcggcacgggaacagcagcgacggacag
aaggaccgctggtacaagtttgacgacggtgacgtgacggagtgtaagatggaggatgac
gaggagatgaagaaccagtgcttcggtggagagtacatgggcgaggtgttcgaccacatg
atgaagcgcatgtcgtaccggcggcagaagcgctggtggaacgcctacatcctgttctac
gagcgcatggacaccgcagggggcgacagagagctgctgaagcacatctccgaactgacc
ctcgcaccccacaccaaccagcccaaaatgcccttgaccatcgaagccagcgttcgcaaa
cagaacgtgcagttcatgcacagccgcatgcagtacagcctcgagtactttcagttcgtt
aagaaactgctgacctgcaacagcgtctacctgaaccctcctccaggtcaagatcatctt
ttaccagaagctgaagaaatagcgatgattagcatacagcttgctgctagatttctgttt
agcactggattccacacaaagaaagtagtccgaggcccagctagtgactggtatgatgct
ctgtgtattctgttgcgtcacagcaagaacgtccgcagctggtttgcacacaacgtcctc
ttcgccttccccacacgcttctccgaatacctgctggagtgtccgagtgcggaggtgcgc
ggagcttttgccaaactgatggtgttcatcgcacacttctccctgcaggacggaccctgc
cctgctccggtcacctcgcccggctcgtccacacaggcctgtgacggagtgaccctgagt
gaccacctgttacgagcggtgctgaacttactgaggagagaagtgtccgaacacggacgc
caccttcagcagtacttcaacctcttcgtcatgtacgccaatctgggtctggcagagaag
acacagctgctgaagctcagcgttcctgccacgttcatgctggtggcgctggacgagggt
cccggtcctcccatcaagtatcagtacgctgagctcggcaaactctactcggtggtgtca
cagctggtgcgctgctgcgacgtgacgccccgcatgcagtcctccatcaacggtaaccca
ccgctgaccaatccgtacggtgaccccagcctcaccgctcccatcatgcccctgcagcag
ctggtggctgagatcctgtttgtgcgctccagctacgtgaagaagatcatcgaggactgc
agcagttctgaggagacggtgaagctgctgcgcttctgctgctgggagaaccctcagttc
tcgtccacggtcctcagcgagctgctctggcaggtggcgtattcctacacctatgagctg
aggccgtacctggatctcctgctgcagatcctcctgatcgaggactcgtggcagacgcac
aggatccacaatgttttgaagggcattcctgatgaccgagacgggctctttgacaccatc
cagcgctccaagaaccactatcagaaacgagcttatcagtgcatcaaatgcatggtggcc
ctgttcagcagctgcgctgtggctcatcagatcctgcagagcaatggggatctgaagagg
aagtggacgtgggcagtggaatggctgggtgatgagctggagaggaggccgtacacagga
aaccctcagtacagctacaacaactggtctcctccggttcagagcaacgagacgtccaac
ggctacttcctggagcgctctcacagcgcacgcatgaccctggccaaggcctgcgagctc
tgtccagaagaggagccagacgatcaggaagctcctgatgagcacgactcgtctccgccg
gaggacactgcgctctatcctcatcctccagggactcagtatcagcagcccaataaccag
ccccacgctcagccctacaccggcccggccgcgcagcacatgaataacccccagagaccc
ccgcagaggcctcaagagagctgggacggggcggacgaggttcctccggtccagacgaaa
gagtag
DBGET
integrated database retrieval system
