Carassius auratus (goldfish): 113050127
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Entry
113050127 CDS
T07313
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua00260
Glycine, serine and threonine metabolism
caua00630
Glyoxylate and dicarboxylate metabolism
caua00670
One carbon pool by folate
caua01100
Metabolic pathways
caua01200
Carbon metabolism
caua01230
Biosynthesis of amino acids
caua01240
Biosynthesis of cofactors
caua04981
Folate transport and metabolism
Module
caua_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
113050127 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
113050127 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
113050127 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
113050127 (shmt2)
Enzymes [BR:
caua01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
113050127 (shmt2)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Flavi_NS5
Motif
Other DBs
NCBI-GeneID:
113050127
NCBI-ProteinID:
XP_026068610
Ensembl:
ENSCARG00000066097
UniProt:
A0A6P6K9P5
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All DBs
Position
31:complement(567546..585974)
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AA seq
499 aa
AA seq
DB search
MLTLTLRQLIRPVCRHVPAVALVRSQHSAAAVSDDERSWTGQESLAQDDPEMWDLLQKEK
DRQSRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCQKRAL
EAFDLDPSLWGVNVQPYSGSPANFAAYTAVLNPHERIMGLDLPDGGHLTHGYMSDVKRIS
ATSIYFESMPYKLNPESGLIDYDQMELTARLFRPKLIIAGTSAYARLIDYSRIKKLCTEL
NAYMLADMAHISGLVAGKAIPSPFTHADLVTTTTHKSLRGSRAGLIFYRKGVRSLDKKGK
EVMYDLEEKVNFSVFPSLQGGPHNHAIAGVAVALKQATTPMFREYIAQVLKNSKAMADAL
LKKGYTLVSGGTDNHLVLVDLRPQGMDGARAERVLELVSITANKNTCPGDKSALTPGGLR
LGSPALTSRQFKEADFQQVVDFFDQGIEIALDVKKKTKKLSDFKSFLLEDVETASRIADL
RRRVEAFARPFPMPGFTDH
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgttaacactgacattgagacaactgatcaggcccgtgtgccggcatgttcccgccgtg
gctctcgtcagatcccagcattcagcagcggcggtgtctgatgacgagcgctcgtggacg
ggacaggagagtctggctcaggacgacccggagatgtgggatcttctgcagaaggagaag
gacagacagagccgaggcctggagctcatcgcctccgagaacttctgcagtcgtgcggct
ctcgaggctcagggttcgtgtctcaacaacaagtactctgaaggataccctggaaaaagg
tattacggcggggcggaggtggtggatcagatcgagctcttgtgtcagaagagggctctg
gaggcgtttgacctcgacccgtctctgtggggcgtcaatgttcagccctactccggatct
ccagcgaacttcgccgcttacacagccgtcctgaaccctcacgagcgcatcatgggcctg
gacctgcccgacggaggacatctcactcacggatacatgtctgatgtcaagcggatctca
gccacctccatctacttcgagtcgatgccctacaaactcaaccctgagtccggtctgata
gactatgatcagatggagttgacggctcgactctttcgacccaaactcatcatcgccggc
accagcgcttacgctcgcctcatcgactacagccgcatcaagaagctgtgcaccgagctg
aacgcatacatgctggcggacatggctcacatcagcggactggtggcaggcaaagccatc
ccctcgccgttcacacacgccgacctcgtcaccacaaccacacacaaatcactgcgagga
tccagggcggggcttatcttctaccggaagggcgtgcgctcgctggataagaagggcaaa
gaggtcatgtatgacctggaggagaaggtcaacttctctgtgttcccttcgcttcaaggc
ggccctcacaatcacgccatcgccggcgtcgctgtggctctcaaacaggccacgacgccc
atgtttcgtgaatacatcgctcaggttctgaagaactcgaaggccatggccgatgcgctg
ctgaagaagggctacacgctggtctcgggaggaactgataatcatctggttctggtggat
ctgagacctcaggggatggacggagcgcgtgcggagcgggttctagagctggtgtccatc
acagccaacaagaacacgtgtcctggagacaagagcgcactgacccccggcggcctgaga
ctcggatcccctgctctcacgtctcgtcagttcaaggaggctgacttccagcaggtggtg
gatttcttcgatcagggcatcgagatcgctctggacgtcaagaagaagaccaaaaagctg
tcagatttcaagagtttcctgctggaggacgtggagacggcgtctcgtatcgctgatctg
cgtcgccgcgtggaggctttcgctcgtcccttccccatgcctggattcaccgaccattaa
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