Carassius auratus (goldfish): 113050203
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Entry
113050203 CDS
T07313
Name
(RefSeq) NFX1-type zinc finger-containing protein 1-like
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
113050203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
DEAD
ResIII
SLFN-g3_helicase
nSTAND3
PhoH
UvrD-helicase
AAA_22
AAA_16
WD40
AAA_5
Motif
Other DBs
NCBI-GeneID:
113050203
NCBI-ProteinID:
XP_026068750
Ensembl:
ENSCARG00000022603
UniProt:
A0A6P6KA11
LinkDB
All DBs
Position
31:2370761..2385091
Genome browser
AA seq
1986 aa
AA seq
DB search
MFNPRGGRQQRGRGGFSGPQRRDGSVPGQRQASSSPSRNRGSSRDGRGEGGGRGGRGERG
GRGGKGGRGGDGRGRGHEQASGSTNSQWERQPDEKAQGARGRGGGGRGRGQRREENKQQG
QPSFNSVHRPVIRGVHPRGFGRPVHGLMQQNLLNYRLPDPLHSSSRPENTGHQQASRSMT
DLRVVPQGEEPQRGRVETQRGRGGNGRGRGRGRDGTPDMRKLGYKTLEGLLEREASEVAI
TLSSNTGLKNLLEESMMRSDLVQLVCQVLYKAFGSRIDRKIVLHLARVVKDSQFFRNILP
YHVTGMMSDYAQARREQYPQHLNNIISLLSEVLNMFPHSSIQSVSMLVALLKPTVNQLRA
SGVDILPSTDEDLERVQGLVDHLQEKSRQGTLRSDNYSFLAADEDAPPGEEDFRKMSIYP
TLEEFHLDIKPFLRPNIMSQSFPNARIYLDTHFRLLREDFVRPLREGVKEILRNQHSETV
DGIPLKKRRFDDIRVYFDTRLVLPLCTPTGIAYKVQFDPRPLQFVRWENSKRLIYGSLVC
LSMDNFETFLFATVTDRDPTLLRKGQVHLCFSSESRATLASIQPSDSFLMVETTAYFEAY
RYVLEGLQEQDENDVPFQRYIVECNTDVDPPAYLRVEGRSYDLSSITAEGKGKLAPFNPL
TPKAWPDEETMGLDESQLQALKLALTNEVAIIQGPPGTGKTHVGLKIAHALLNNHEAWSN
GSPMLVVCYTNHALDQFLEGILGFLKRGIVRVGGRSNSETLKPFGLRELTRASNFRKNLP
QHLRRAHHEIYTQMEAAEELLKRQSAQLECSLRGVLREDFLERYMSPEHWDSLCLQPVMD
GFESVGKKKPSMMAEWLGIGFSGFSQLLTELSDEEGAQLNDEELIEIDEEADLIQAERIV
VDAEHGDNYWKKLKQDQKDIADMAELMLALNLNDPEPQEAARHQRQANQGEWQIQRHQKK
KIKQMAKNELRKTSAMTEHQERKTVDVWSLSLKDRWRLYRLWVLRYRTDLRTKALTSEHV
YQDAAERLNEIRRREDLCVLQQARVVGMTTTGAAKYRQALQELQPRLVIVEEAAEVLEAH
TITTLSKACQHLILIGDHQQLRPSATVYDLAKNFNLEVSMFERLVRVNFPFVRLNYQHRM
RPCIARLLTPHIYETLENHPSVLEYDNVKGLLTNLFFVDHGHFEEEIKDGRSHQNPHEAQ
FVVALCRYLLLQDYKPSQITILTTYTGQLHCLRKLMPSPNFSGVKVHVVDKYQGEENDII
ILSLVRSNLHKRVGFLNISNRVCVALSRAKMGLYCIGNMDMLSSVKLWSNILHTLREHGQ
VGRALTLSCQNHPDKQILASCSDDFKGAPEGGCDQPCQFRLDCGHVCTRMCHPYDVEHKE
YKCMKDCQKVLCDLKHKCTRLCHEECGECQVLLDKIIPSCQHSQRVPCHIDPEEFVCRVR
CQKTLPCGHPCKAACGESCTAQCNVKVQMQLKCGHVQEEPCFISSDPKKMTYCRTKCGTT
LDCGHPCPGTCHGCCQGRLHKACNHKCQQILVCSHRCEEPCVRDCPPCTVRCENRCVHSA
CMKTCGQPCAPCREPCEWQCHHHSCTKLCHEPCDRPPCSVPCNNTLPCGHLCIGLCGDPC
PDKCRICHKDEVTEIFFGNEDDPDACFIQLEDCKHLFEATGMDQYMNLDQDQGAELDQRA
IRLKDCPRCRTPIRRNLRYGTHINRSLAAIEMVKEKINGVSYEIKQKQDDLRLQLLGKKI
LKMHFAQEFALLKDKFETKDLSRQQLWHSENLMTYLERVGKLKEMQAEHMTLLLDELQPF
SSKVEEVLGFLLRPSQRFSDQQIADLERELKRLSYLAELNVRCCMSPIRSRVYSTEIQKL
REILEDTLPFSEYLEHTVKEMFADLDTKLPLSGLGITDDERVMIVKAIGLNKGHWYKCPN
GHVYAIGECGGAMQQSKCPECDAAIGGTNHNLIQGNAVATEMDGAEHAAWSDAANMANFD
LQNFED
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatccaagaggaggaagacagcaaagaggaagaggaggcttcagtggccctcaa
agaagagatggttcagtgcctggtcaaagacaagcaagcagctctcccagtcgaaacagg
ggaagcagtagagatggccgaggggaggggggaggaagaggaggaagaggagaaagagga
ggaagaggaggtaaaggaggaagaggaggagatggaaggggtcgaggtcacgaacaagcc
agtggaagtacaaacagccaatgggaaagacaacccgatgaaaaagctcaaggtgcaaga
ggacgaggaggaggaggaaggggcagaggacagaggagagaagaaaacaagcaacaaggg
cagccaagttttaactctgtccaccgcccagtgataaggggagtccacccgagaggattt
gggagacctgttcatgggctcatgcaacagaatttgctcaattatcgtcttccagaccct
ttacattcaagcagccgccctgaaaacacaggtcaccaacaagccagtagaagtatgact
gatttaagagttgttccacaaggtgaagaacctcaaagaggaagagtagaaactcagaga
ggtagagggggaaatgggagaggaagaggaagagggagagatggcacccctgacatgcgc
aaactggggtataaaacccttgaaggccttctggagagagaagcgtccgaggtggccatc
accctttcatctaacactgggctcaagaatctgcttgaagaaagtatgatgagaagcgac
ctggtgcagctggtctgtcaagttctctacaaggccttcggctctcgaattgaccgcaag
atcgtgctacacttggctcgcgttgtcaaggactctcagtttttccgtaacattctgccg
tatcatgtgactggaatgatgtcggattacgcgcaagcccgaagggagcagtatccccaa
catctaaacaacatcatcagccttctctccgaagttctcaacatgtttcctcacagctct
atccagtcggtctcaatgttggtggcgcttttgaaacccaccgtcaaccagttgcgtgcc
tcaggtgtggatatcctccccagcactgatgaagacttggagagggtgcaaggtttggtg
gaccacctccaagagaaatcaaggcaaggcaccttgcggtcggataactactccttccta
gcagccgatgaggatgccccacctggggaagaagacttcaggaagatgagcatttatcca
acccttgaggagttccacttagacataaagccattcttgagacccaacataatgtctcaa
agctttcctaacgctcgcatctatctagacacacacttccgacttctgcgtgaagatttc
gtgaggccgctgagagagggcgttaaggagatcctgaggaaccagcacagtgagactgtc
gatggaataccactgaaaaagcggcgttttgatgacatcagagtttactttgacacccga
ttggttttgccactctgcacaccaacgggaatcgcctacaaagtgcagtttgacccacgg
cctcttcagtttgtccggtgggaaaattccaaacgtctcatttacggatcccttgtctgt
ctctccatggacaatttcgaaaccttcctgttcgccactgttaccgaccgggatccaacg
ctgctgaggaagggacaggtgcatctctgtttttcttctgagagcagggcaacgttggcc
agtattcagccctcggactccttcctgatggtcgagaccacggcttactttgaggcctat
cgatacgttctagaaggtctccaggagcaagatgagaatgatgttccctttcaaaggtac
atagtggagtgcaacacagatgtagatcctccagcttaccttcgggtggaaggaaggtca
tatgatctgtctagcatcacggcagaagggaaggggaagcttgcacccttcaatcccttg
accccaaaggcctggcctgatgaggaaacaatgggtcttgatgaaagccaacttcaagca
cttaaactggccttaaccaatgaagtggccatcatacagggaccaccaggaacagggaag
acgcatgtaggcctgaagatcgctcatgctttgctaaacaaccatgaggcctggtcaaat
ggtagccctatgctggtggtctgttataccaatcatgctcttgaccagtttctggaaggc
atccttggatttttaaaaaggggcattgtgagagttggaggacggagtaacagtgaaact
ctgaagccctttggtctgagggagctgaccagggcatcaaacttccgcaaaaatttacca
cagcatctaaggagagcccatcatgaaatctacacacagatggaggccgcagaggagctc
ttaaagagacagtctgctcagctggagtgcagcctgcgtggcgtcctcagagaagacttc
ctggagagatacatgtctcctgagcactgggacagcctgtgtctacagccggtgatggat
ggatttgagagtgtggggaaaaagaagccttcaatgatggcggagtggctcggcatcgga
ttctctggtttttcgcagctactaacagagttgtctgatgaagagggggctcagctgaat
gatgaggaactgatagaaatcgatgaagaggcggatctgatccaggccgagaggatagtg
gtggatgcggagcatggagataattactggaaaaagctgaagcaagatcagaaagacatc
gctgacatggctgagttgatgctggctttgaacctgaatgatcctgagccacaagaagca
gccagacatcagaggcaggctaatcaaggggaatggcagattcaaagacaccagaagaaa
aaaatcaagcaaatggctaaaaacgagctgaggaaaacttcagccatgactgaacatcaa
gaaaggaaaaccgtagatgtgtggagcctcagtctgaaagacagatggagactgtatcgg
ctttgggttttgcgctatcggactgatctccgcactaaggccctcacctctgaacacgtg
tatcaggacgcagccgagaggctcaatgaaatccggcgtcgtgaggatctgtgtgtgctg
caacaggctcgggtcgtgggtatgaccaccacaggagcggctaaatacagacaggctcta
caggagctgcagcccagactggtgatcgtggaggaggcggcggaggtgttggaggcgcac
accatcaccaccctcagcaaagcctgccagcacctcatactgatcggagatcaccaacag
ttgaggcctagcgcaacagtgtatgaccttgctaagaatttcaatctggaagtgtcgatg
tttgagaggcttgtcagagtcaactttccatttgtgcgccttaactaccagcatcgcatg
aggccatgcatcgctcggctgttgactcctcatatctatgaaactctggaaaaccacccc
tctgtactggagtatgacaatgttaaggggcttctgacaaatctctttttcgtggatcat
ggtcactttgaggaagagattaaggatggacggagccaccagaaccctcacgaggctcag
tttgtggtcgcgctttgccgctacttgctgttacaggactacaagccttctcagatcacc
attctgacgacttacacaggacagcttcactgtctgcgtaagctcatgccctcaccgaat
ttctctggagtcaaagtccacgttgtggacaaataccaaggggaggagaacgacatcatc
atattgtctctggtgcgcagcaatctacacaagagagtcggcttcctgaacatatcaaac
cgtgtctgcgtagccctttctcgtgctaagatgggtctctattgtattggaaacatggac
atgctgagctccgttaagctgtggagcaacatccttcacactctgagagagcatggtcaa
gtgggtcgtgctttgacgctgagctgtcagaaccatccggataaacagatccttgcatcc
tgcagtgatgacttcaaaggtgcccccgaaggtggttgtgatcagccctgccaatttcgc
ttggattgtggccacgtgtgcacccgaatgtgccacccatatgatgtggaacacaaggaa
tacaagtgcatgaaagactgccagaaggtgctgtgtgatctgaagcacaaatgtacacgt
ctctgtcacgaagaatgtggtgaatgccaggtactcctagacaagatcattccatcatgc
cagcatagtcagagggtgccttgccacatagaccctgaggaatttgtctgtcgagtgcgt
tgccaaaagaccctcccttgcggccatccctgcaaggcagcttgtggagagtcctgcacc
gctcagtgcaacgttaaagttcaaatgcagctgaaatgtggacacgtccaggaagaacca
tgcttcatttccagcgaccccaaaaagatgacatactgcagaacaaaatgtggcaccacc
ttggattgcggccacccttgcccgggaacgtgccatggatgctgtcaaggtcgcctgcac
aaagcatgcaaccacaaatgccaacaaatcctggtgtgttctcatcggtgtgaggagcct
tgtgtaagagattgtccaccatgtacagttcgctgcgagaaccgatgtgtccacagtgcc
tgcatgaagacttgcggtcagccttgtgcgccttgcagagaaccttgcgaatggcagtgc
catcaccacagttgtaccaagctgtgtcatgagccatgcgaccgtccaccttgttctgtt
ccctgtaacaacaccttgccctgtggacacctctgcataggtctctgtggagacccttgt
cctgataagtgtcgcatttgccataaggatgaggtcacggagatcttcttcggcaatgaa
gacgacccggatgcttgtttcattcagcttgaagattgcaagcacctgttcgaagctaca
ggaatggatcaatacatgaatcttgaccaagaccaaggcgctgaactggatcaaagggcg
atccgactcaaggattgtccaaggtgtcgcactccaatccgtagaaaccttcggtatggc
actcatatcaaccgcagcctggcagccatcgagatggtcaaggagaagatcaatggtgtg
tcgtatgagatcaagcaaaagcaggacgaccttcgcttgcaactgcttgggaagaagatc
ttgaaaatgcattttgcccaagagttcgcacttcttaaagataagtttgaaacaaaggac
ctttcacgccaacaactttggcattccgagaacttgatgacctacctcgagagggttggg
aaactaaaagaaatgcaagcagagcatatgacactccttctggacgaacttcagccattc
tctagcaaagttgaggaagtcttgggattcctcttacgtccgtctcagaggttttcagac
cagcagattgcagatctcgaacgtgaattgaagagactctcctacctggctgagctcaac
gtgcgctgttgcatgtcaccgatcagaagtcgtgtttatagcacagagatccagaaatta
agagagatcctggaggacactttgcctttctctgagtatctagaacatacagtcaaggag
atgtttgcggatttggacaccaaactgcctctcagcggcctggggatcactgacgacgag
agggtgatgatagtcaaagccatcgggttgaataaaggtcattggtacaaatgtcccaat
ggccatgtgtatgcaattggcgaatgtggcggtgctatgcaacaaagcaaatgtcctgaa
tgcgacgctgctattggaggcactaatcacaatctcattcagggaaatgctgtggcgact
gagatggatggcgcagagcatgccgcctggtcagatgctgccaacatggcaaattttgac
ctgcaaaactttgaagattga
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