Carassius auratus (goldfish): 113050319
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Entry
113050319 CDS
T07313
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1-like isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113050319
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113050319
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113050319
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113050319
mRNA cycle factors
Stress granule specific factors
113050319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Staufen_C
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
113050319
NCBI-ProteinID:
XP_026068955
Ensembl:
ENSCARG00000041776
UniProt:
A0A6P6KAL2
LinkDB
All DBs
Position
31:complement(5678721..5688934)
Genome browser
AA seq
701 aa
AA seq
DB search
MSQLQFQAPANPAPSAAPLQLAPPQPGFSIPCGAAPLPSESASHPLRNSALPSASATPFC
NPTESNMANPKEKTPMCLVNELARYNKIQPEYKLLSEQGPAHSKIFSVRLTLGDQHWDAE
GTSIKKAQHSAATCALTQTNLPKPNHRSPRHPGKNPGGIYKGSEYNVTHTVELNALCMKL
GKKPIYKPIDAYQGMRPAFNYNIRAPGPYARPMQHYYYPFPPVGPVLYHMELSIGGQQFH
GKGRTRQAAKHDAAAKAIKYLQKEPVMQQIAEMKEEPVQENLNKSEISQVFEIALKRNMS
VNFEVLKETGSPHLKSFVVRVTVGEFSGEGEGKSKKIAKKLAAIAVLEELHKLPQLPVID
KIPLRIKKKSKSIIKLQTSPEYGQGMNPISRLAQIQQAKREKEPEYTIVTERGLPRRREF
VMQVSVAGQNAEGMGPSKKVAKRNAAEKMLEFLGFKVPQPQPPKPALKTDEKTPAKKPGD
GRKVTFFEPGSLEKAGLVNKEEDFRIPFLSHQQLPAGILPMVPEVAQAVGANQGPHAKDY
GRTAAPNPAKTTVTAIIANELLFAGTSPTAEGILKTNNGLAHRPHGPLTRPSEQLSYLAT
VQGLQVEYKDFPKNNKNELVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQ
QSNERTANGPMTGCNKQDLEGDALLKPANSSTIRKTLDGTV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcttcagttccaggcacctgccaaccctgcacccagtgctgcccctctacag
ctggccccgccccaacctgggttcagcattccctgcggcgccgctcctttaccctcagag
agtgccagtcacccgcttcgaaactccgccctgccttccgcctctgccacgcccttctgc
aaccccacagaatctaacatggcaaaccctaaagagaagacccctatgtgtctggtaaat
gagttagcccgttacaataagatccaacctgaatacaaactactcagtgaacaaggacca
gcccactccaagattttctcagtgcggttaactctgggggatcagcactgggatgcagag
gggaccagtatcaaaaaagcccagcactcagcagcaacatgtgctctcacccaaactaat
ctccccaaacctaatcacagaagcccccgccacccaggcaagaacccaggtgggatctac
aagggctcagagtataatgtaacccacactgtggagcttaatgcactttgtatgaagttg
ggcaagaagcccatctacaaacctatagatgcctaccaggggatgagaccagcattcaac
tacaacatcagagcaccaggcccttatgcacgccccatgcagcattattactacccattt
cctcctgtggggccagtactgtatcatatggagctgtctatcggtggacaacagttccac
ggcaagggccgcacacgtcaagcagccaaacatgacgctgcggctaaagctatcaaatat
ctgcagaaagagccagtaatgcagcaaatagctgagatgaaagaagagccagtacaggaa
aaccttaacaaatcagagatcagccaagtgtttgagattgcactgaagcgcaacatgtct
gtgaattttgaggtgcttaaagagactggctctcctcacttgaagagttttgtggtgcgg
gtaacagtgggcgagttttcaggggagggtgagggcaaaagcaagaagatcgccaaaaaa
ctagccgccatcgctgtcctggaggagctccacaaactgcctcaactacctgtcatcgac
aagataccactacgcattaaaaagaaaagcaagtccattattaagctgcagaccagtccc
gagtacggtcagggcatgaaccccatcagcagactggctcagattcagcaggctaagaga
gaaaaagagccagagtacactatagtgacagagagaggactgcctcgacgcagagagttt
gtcatgcaggtgtcagttgcaggtcagaatgcggaaggaatgggacctagtaaaaaagtg
gccaagagaaatgcagccgagaagatgctggagtttctgggcttcaaagtgcctcagcca
cagccacccaaaccggctctgaaaaccgatgagaagactcctgctaagaagcctggagat
ggacgtaaagtgaccttctttgagccaggctctttggagaaggctggtctggtcaataag
gaggaagatttccgaattccctttctcagccatcagcagcttcctgctggcattttaccc
atggtgcctgaggtggcacaggcagtgggtgccaaccagggaccccatgccaaagactac
ggtcgcacagctgcccccaacccagccaagaccacagtaactgccattattgccaatgag
ctgctgtttgctgggacgtccccaaccgcggagggtatactgaagaccaacaacggcttg
gcacacagaccccacggaccccttaccagaccgtccgaacagctcagctacctggccact
gtacagggcttacaggttgaatacaaagactttcccaaaaataacaagaacgagcttgtg
tctctgatcaactgctcctctcagccccctctcatcagccacggcatcggcaaggatgtg
gagtcctgccatgacatggctgctctgaacatcctgaagctcctgtcagaacttgaccag
cagtctaatgagcgcacagctaatggaccaatgacagggtgcaacaaacaagacctcgag
ggcgatgcattattaaaaccggctaactcaagcaccatcagaaagacactggatggcaca
gtgtaa
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