Carassius auratus (goldfish): 113050327
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Entry
113050327 CDS
T07313
Name
(RefSeq) contactin-4-like isoform X1
KO
K06761
contactin 3/4/5/6
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113050327
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
caua00537
]
113050327
Cell adhesion molecules [BR:
caua04515
]
Immunoglobulin superfamily
Contactins
113050327
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
caua00537
]
Others
113050327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_C17orf99
Sp38
C2-set_2
Pur_ac_phosph_N
Tissue_fac
NDNF
Motif
Other DBs
NCBI-GeneID:
113050327
NCBI-ProteinID:
XP_026068965
Ensembl:
ENSCARG00000048270
UniProt:
A0A6P6KAL8
LinkDB
All DBs
Position
31:complement(5919949..6055918)
Genome browser
AA seq
1027 aa
AA seq
DB search
MKLLWKLLVLQPFLGCLAGNTLQSPVFTKQPGSIVFPVDTMEKNKEVVFSCEAQGDPPPF
YRWKLNGSLLNFKPGSHHSLSGGNLRINHLNKEDAGTYQCLASNSLGTIVSREASLTFAY
LENFRSHKRSSVSVREGQGVVLLCGPPPHFGALTFSWIFNEYPSFVKQDFRRFVSQETGN
LYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTPLILRNDGVMGEYEPKIEVQFPEIVQVA
KGSTVRLECFALGNPVPSISWHRVDGVPFARKVDVRKTSGVMEIPYFQQEDAGTYECMAE
NSKGRNSVQGKLSFFASPQLIEKPQDVQKAIDDSLVWECKATGKPKPSYRWMKNGENLEP
TEERVQVINGALSITRLALSDIGMYQCVAGNKYGEVYSNAELRVIAVAPDFFQNQLKSHT
LVKEGGDVLIECKPKMSPRGTISWRKGNDALRESSRIAILDSGSLRISNTTKADAGMYTC
AAHNQFGEASSSGNLLVKEPTIITTAPNTLDVTVGESIILPCQVSYDPSLELKFTWFFNE
QLIHFGSHGGYFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSSSIATDLIVRGPP
GPPTSIHVDEVTDTTATLSWRPGPDNHSPITAYTIQARTPFSLGWQAVSTVPKVVGGSHL
TATVIELNPWVEYEFRVLARNAVGTGEPSKPSKKARTKETVPKVTPANVSGGGGSRSELV
ITWEPVPEELQNGAGFGYVVAFRPFGATGWMQAAVPSPEASKYVFKNETILPFSPFQVKV
GVYNNKGEGPFGPVVTIYSAEEEPGRAPSRLRAKSLSAFDVEVYWKALPWSTSKKRVLGY
ELRYWEKNEKEDTASLLRTVGNRTVAIIQGLKGCTTYYITVRAYNTAGTGPPSPAVNVTT
KKPPPSQPPSKVMWNTSNSKIILNWEQVKPLENESEVMGYKVLYKRNQFSRPSIMETNTT
SVELSLPTDEEYIIQIRSFGEGGEGSSSRQITIPKISGPNAIGSASSVSTLSALSTIALS
LTARTSL
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgctatggaaactgctggttctgcagccattcctggggtgccttgcaggcaac
acactgcagagccccgtgttcacgaagcagccaggcagcattgtgtttccagtagacacc
atggagaagaacaaggaggtggtttttagctgtgaggcgcaaggtgaccctcctcctttt
tacaggtggaagctaaatggcagtctgctcaactttaaacccggctctcatcacagcctc
tctggaggcaaccttcgcatcaaccatctcaataaagaggacgctgggacgtaccagtgc
cttgcttccaactccctcgggactattgtcagcagggaggccagcctaacctttgcctat
ttggaaaacttcagatcccacaagcggagttctgtgtcggtccgggaaggacaaggagtg
gtgcttctctgtgggccgccccctcattttggagctttgacgttctcctggatttttaat
gagtacccgtcatttgtgaagcaagattttcgtcgattcgtgtcccaggagacagggaat
ctatacatcgctaaagttgagccatctgatgtgggcaactacacctgtgtcgtgaccaat
actgtcaccaagacacgcgtccaaggcccgcctactcctctgatactgcgcaacgacggt
gttatgggagaatatgagccaaagattgaagtgcagtttccagagatcgttcaagtggcc
aaaggttcaactgtgcgtctggagtgttttgcactggggaatccagtaccttccataagc
tggcatcgggtggacggagtcccattcgcccgtaaagtggatgtaagaaaaaccagtggc
gtgatggaaatcccttacttccagcaagaagatgcgggcacgtatgaatgtatggcagag
aactcgaaaggaagaaactctgtgcagggaaagctgtctttctttgcctccccccagcta
attgaaaagccccaggatgtgcagaaggccattgatgactctctggtgtgggaatgcaag
gccacagggaaacccaaaccctcatacaggtggatgaaaaatggagagaacctggagccc
actgaggagagggtgcaggtcattaatggcgccctgtccatcactcgcctggcgctctcc
gatattggaatgtaccagtgtgtggctgggaacaagtatggagaagtgtactccaatgct
gaactcagagttatcgctgttgctcctgatttcttccaaaatcagctgaagagccacact
ttagtcaaagaaggcggcgatgttctcattgaatgcaagcccaagatgtctcctcgaggc
acgatctcctggcgcaaaggcaacgacgccctccgagaaagcagcagaattgctatactg
gatagtggaagccttcggatatccaacaccaccaaagcggatgctggcatgtacacatgt
gctgcccataaccagtttggggaggccagcagctcagggaacctgcttgttaaagagcca
actatcattacaactgctccgaacacgctggacgtgaccgttggtgagagcatcattctt
ccctgccaggtgtcctacgatccctcgttggagctcaagttcacctggtttttcaatgag
cagctcatccacttcggcagccatggaggatactttgaaaaagttggcggacagcactcg
gcaggtgacatcatgatccggaacattcagctgaggcatgctgggaagtacacgtgtgca
gtgcagaccaaggtggacagcagctccatcgcaacagacctgattgtcagaggtcccccc
ggcccccctaccagcatccatgtggatgaagtcacagataccactgccactctctcctgg
aggcctggtcctgataatcacagtccaattactgcctacaccatccaggctagaacccct
ttctccctcggctggcaagctgttagcacagtgccaaaggtggtcgggggctcacatctg
actgctacagtcatcgagcttaacccctgggtggagtatgagttcagagtgttggcaagg
aatgcagtgggcacaggagagcccagcaaaccctcgaagaaagccaggactaaagaaaca
gttcccaaggtcaccccagccaacgtgagcggaggaggtggcagtcgatcagagttagtc
atcacttgggagcccgttcctgaagagctgcagaacggagcagggtttggctacgtggtt
gctttccggccctttggtgccaccgggtggatgcaggcggcagttccctctcctgaagcc
tccaaatacgtcttcaaaaacgagaccattttacccttttctccattccaagtcaaagtg
ggcgtgtacaataacaagggggaaggaccttttggacccgtggttaccatttactctgct
gaggaggagcctggaagggcacccagtcgactcagagccaagagtctttcagcatttgat
gttgaggtatattggaaagcccttccctggagcacaagcaagaaacgtgttctcggctat
gagttgagatactgggagaagaatgagaaagaagacacagctagtttgctaaggacagta
ggaaaccggacggtggccattattcaagggttaaaaggatgtaccacctattatataacg
gtgagagcctacaacacagcaggaacaggaccaccaagtccagcggtcaacgttaccacc
aaaaagcctccccctagccagccgccgtcaaaagtcatgtggaatacatcaaactccaaa
atcattctgaactgggaacaggtgaaacctctggaaaatgaatctgaggtcatgggatac
aaggtactgtataagcggaaccaattcagcaggcccagcattatggagaccaacaccacc
tcagtggagctgtcgctacctaccgatgaggagtacatcatccagatcaggtcttttgga
gaaggaggggaaggcagcagcagccgacagatcaccattcccaaaatatcaggtcccaat
gccatcggctcggcgtccagtgtgtccactctctctgccctcagtacaatagctctctcc
ctcacagctcgcacatctttatga
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integrated database retrieval system